RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 CDH10Q9Y6N8 788 aa12.63□□□□□ -0.39
HPS3-201ENST00000296051 NCOR1O75376 2440 aa12.63□□□□□ -0.39
HPS3-201ENST00000296051 LDOC1O95751 146 aaPredicted RBP12.63□□□□□ -0.39
HPS3-201ENST00000296051 CSTAP01040 98 aa12.63□□□□□ -0.39
HPS3-201ENST00000296051 TGM1P22735 817 aa12.63□□□□□ -0.39
HPS3-201ENST00000296051 RPS15AP62244 130 aaKnown RBP12.63□□□□□ -0.39
HPS3-201ENST00000296051 CDK3Q00526 305 aa12.63□□□□□ -0.39
HPS3-201ENST00000296051 SRYQ05066 204 aa12.63□□□□□ -0.39
HPS3-201ENST00000296051 PXDC1Q5TGL8 231 aa12.63□□□□□ -0.39
HPS3-201ENST00000296051 PODNL1Q6PEZ8 512 aa12.63□□□□□ -0.39
HPS3-201ENST00000296051 USP51Q70EK9 711 aa12.63□□□□□ -0.39
HPS3-201ENST00000296051 KLHDC8AQ8IYD2 350 aa12.63□□□□□ -0.39
HPS3-201ENST00000296051 OR5T3Q8NGG3 340 aa12.63□□□□□ -0.39
HPS3-201ENST00000296051 OR5L2Q8NGL0 311 aa12.63□□□□□ -0.39
HPS3-201ENST00000296051 MYEOVQ96EZ4 313 aa12.63□□□□□ -0.39
HPS3-201ENST00000296051 S100A16Q96FQ6 103 aaKnown RBP12.63□□□□□ -0.39
HPS3-201ENST00000296051 GON7Q9BXV9 100 aa12.63□□□□□ -0.39
HPS3-201ENST00000296051 TRPV4Q9HBA0 871 aa12.63□□□□□ -0.39
HPS3-201ENST00000296051 SLAMF7Q9NQ25 335 aa12.63□□□□□ -0.39
HPS3-201ENST00000296051 SHISA7A6NL88 538 aa12.63□□□□□ -0.39
HPS3-201ENST00000296051 H7C2Y5 167 aa12.63□□□□□ -0.39
HPS3-201ENST00000296051 KLKB1P03952 638 aa12.63□□□□□ -0.39
HPS3-201ENST00000296051 SELENOVP59797 346 aa12.63□□□□□ -0.39
HPS3-201ENST00000296051 POU6F2P78424 691 aaPredicted RBP12.63□□□□□ -0.39
HPS3-201ENST00000296051 THEM6Q8WUY1 208 aa12.63□□□□□ -0.39
HPS3-201ENST00000296051 SLC39A1Q9NY26 324 aa12.63□□□□□ -0.39
HPS3-201ENST00000296051 NLGN3Q9NZ94 848 aa12.63□□□□□ -0.39
HPS3-201ENST00000296051 PPP4R1LQ9P1A2 415 aa12.63□□□□□ -0.39
HPS3-201ENST00000296051 NDRG4Q9ULP0 352 aaKnown RBP12.63□□□□□ -0.39
HPS3-201ENST00000296051 PCDHGB2Q9Y5G2 931 aa12.63□□□□□ -0.39
HPS3-201ENST00000296051 FAM171A2A8MVW0 826 aa12.62□□□□□ -0.39
HPS3-201ENST00000296051 MRPS14O60783 128 aaKnown RBP12.62□□□□□ -0.39
HPS3-201ENST00000296051 CD2P06729 351 aa12.62□□□□□ -0.39
HPS3-201ENST00000296051 HOXD11P31277 338 aaPredicted RBP12.62□□□□□ -0.39
HPS3-201ENST00000296051 HTR3AP46098 478 aa12.62□□□□□ -0.39
HPS3-201ENST00000296051 AFF3P51826 1226 aaKnown RBP12.62□□□□□ -0.39
HPS3-201ENST00000296051 C1QTNF12Q5T7M4 302 aa12.62□□□□□ -0.39
HPS3-201ENST00000296051 SLC16A12Q6ZSM3 486 aa12.62□□□□□ -0.39
HPS3-201ENST00000296051 RFPL4BQ6ZWI9 263 aa12.62□□□□□ -0.39
HPS3-201ENST00000296051 SPERTQ8NA61 448 aa12.62□□□□□ -0.39
HPS3-201ENST00000296051 PROKR2Q8NFJ6 384 aa12.62□□□□□ -0.39
HPS3-201ENST00000296051 WDR20Q8TBZ3 569 aa12.62□□□□□ -0.39
HPS3-201ENST00000296051 FANK1Q8TC84 345 aa12.62□□□□□ -0.39
HPS3-201ENST00000296051 DNAJA4Q8WW22 397 aaPredicted RBP12.62□□□□□ -0.39
HPS3-201ENST00000296051 SLIRPQ9GZT3 109 aaKnown RBP12.62□□□□□ -0.39
HPS3-201ENST00000296051 OR51J1Q9H342 316 aa12.62□□□□□ -0.39
HPS3-201ENST00000296051 ACAD8Q9UKU7 415 aa12.62□□□□□ -0.39
HPS3-201ENST00000296051 KCNK2O95069 426 aa12.62□□□□□ -0.39
HPS3-201ENST00000296051 HSD3B1P14060 373 aa12.62□□□□□ -0.39
HPS3-201ENST00000296051 HSD3B2P26439 372 aa12.62□□□□□ -0.39
HPS3-201ENST00000296051 CSNK1DP48730 415 aa12.62□□□□□ -0.39
HPS3-201ENST00000296051 ARFIP1P53367 373 aa12.62□□□□□ -0.39
HPS3-201ENST00000296051 NR0B2Q15466 257 aa12.62□□□□□ -0.39
HPS3-201ENST00000296051 FCN2Q15485 313 aa12.62□□□□□ -0.39
HPS3-201ENST00000296051 DUSP7Q16829 419 aa12.62□□□□□ -0.39
HPS3-201ENST00000296051 RBM45Q8IUH3 476 aaKnown RBP12.62□□□□□ -0.39
HPS3-201ENST00000296051 LACC1Q8IV20 430 aa12.62□□□□□ -0.39
HPS3-201ENST00000296051 LINC00471Q8N535 108 aa12.62□□□□□ -0.39
HPS3-201ENST00000296051 CCNL2Q96S94 520 aaPredicted RBP12.62□□□□□ -0.39
HPS3-201ENST00000296051 TMEM45AQ9NWC5 275 aa12.62□□□□□ -0.39
HPS3-201ENST00000296051 A0A0A6YYC8 382 aaPredicted RBP12.62□□□□□ -0.39
HPS3-201ENST00000296051 TRBV2A0A0J9YWF9 115 aa12.62□□□□□ -0.39
HPS3-201ENST00000296051 KANTRA0A1W2PQU2 76 aa12.62□□□□□ -0.39
HPS3-201ENST00000296051 I3L1I5 382 aaPredicted RBP12.62□□□□□ -0.39
HPS3-201ENST00000296051 PIP5K1CO60331 668 aa12.62□□□□□ -0.39
HPS3-201ENST00000296051 MT-ND4P03905 459 aa12.62□□□□□ -0.39
HPS3-201ENST00000296051 SLC14A1Q13336 389 aa12.62□□□□□ -0.39
HPS3-201ENST00000296051 CCSMST1Q4G0I0 132 aa12.62□□□□□ -0.39
HPS3-201ENST00000296051 NXPE4Q6UWF7 544 aa12.62□□□□□ -0.39
HPS3-201ENST00000296051 Q7L0L9 218 aa12.62□□□□□ -0.39
HPS3-201ENST00000296051 KCTD9Q7L273 389 aa12.62□□□□□ -0.39
HPS3-201ENST00000296051 UBE2Q1Q7Z7E8 422 aa12.62□□□□□ -0.39
HPS3-201ENST00000296051 PLCZ1Q86YW0 608 aa12.62□□□□□ -0.39
HPS3-201ENST00000296051 FKBP10Q96AY3 582 aa12.62□□□□□ -0.39
HPS3-201ENST00000296051 ALPK2Q86TB3 2170 aa12.62□□□□□ -0.39
HPS3-201ENST00000296051 TNFRSF10AO00220 468 aa12.62□□□□□ -0.39
HPS3-201ENST00000296051 SLC16A5O15375 505 aa12.62□□□□□ -0.39
HPS3-201ENST00000296051 ITGA10O75578 1167 aa12.62□□□□□ -0.39
HPS3-201ENST00000296051 SPDEFO95238 335 aa12.62□□□□□ -0.39
HPS3-201ENST00000296051 EGFP01133 1207 aa12.62□□□□□ -0.39
HPS3-201ENST00000296051 FBXO45P0C2W1 286 aa12.62□□□□□ -0.39
HPS3-201ENST00000296051 MPC1LP0DKB6 136 aa12.62□□□□□ -0.39
HPS3-201ENST00000296051 CLUP10909 449 aa12.62□□□□□ -0.39
HPS3-201ENST00000296051 BAK1Q16611 211 aa12.62□□□□□ -0.39
HPS3-201ENST00000296051 DUSP6Q16828 381 aa12.62□□□□□ -0.39
HPS3-201ENST00000296051 TMEM69Q5SWH9 247 aa12.62□□□□□ -0.39
HPS3-201ENST00000296051 FIGNL1Q6PIW4 674 aa12.62□□□□□ -0.39
HPS3-201ENST00000296051 MARF1Q9Y4F3 1742 aaKnown RBP12.61□□□□□ -0.39
HPS3-201ENST00000296051 C11orf98E9PRG8 122 aa12.61□□□□□ -0.39
HPS3-201ENST00000296051 EIF1AYO14602 144 aaKnown RBP12.61□□□□□ -0.39
HPS3-201ENST00000296051 RP2O75695 350 aa12.61□□□□□ -0.39
HPS3-201ENST00000296051 HRGP04196 525 aa12.61□□□□□ -0.39
HPS3-201ENST00000296051 HBQ1P09105 142 aa12.61□□□□□ -0.39
HPS3-201ENST00000296051 ARSBP15848 533 aa12.61□□□□□ -0.39
HPS3-201ENST00000296051 NDUFV2P19404 249 aa12.61□□□□□ -0.39
HPS3-201ENST00000296051 GAB1Q13480 694 aa12.61□□□□□ -0.39
HPS3-201ENST00000296051 SWI5Q1ZZU3 235 aa12.61□□□□□ -0.39
HPS3-201ENST00000296051 HSD17B12Q53GQ0 312 aa12.61□□□□□ -0.39
HPS3-201ENST00000296051 CHCHD4Q8N4Q1 142 aa12.61□□□□□ -0.39
HPS3-201ENST00000296051 JAGN1Q8N5M9 183 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms