RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 CAMK2AQ9UQM7 478 aa16.52■□□□□ 0.23
PCDHA13-201ENST00000289272 RASD1Q9Y272 281 aa16.52■□□□□ 0.23
PCDHA13-201ENST00000289272 SCN7AQ01118 1682 aa16.52■□□□□ 0.23
PCDHA13-201ENST00000289272 KLF8O95600 359 aaPredicted RBP16.52■□□□□ 0.23
PCDHA13-201ENST00000289272 PRPS1P60891 318 aa16.52■□□□□ 0.23
PCDHA13-201ENST00000289272 KCTD11Q693B1 232 aa16.52■□□□□ 0.23
PCDHA13-201ENST00000289272 OR8J2Q8NGG1 315 aa16.52■□□□□ 0.23
PCDHA13-201ENST00000289272 C1QTNF2Q9BXJ5 285 aa16.52■□□□□ 0.23
PCDHA13-201ENST00000289272 SLC5A7Q9GZV3 580 aa16.52■□□□□ 0.23
PCDHA13-201ENST00000289272 ATP13A2Q9NQ11 1180 aa16.52■□□□□ 0.23
PCDHA13-201ENST00000289272 PPP4R1LQ9P1A2 415 aa16.52■□□□□ 0.23
PCDHA13-201ENST00000289272 RPS2P15880 293 aaKnown RBP16.51■□□□□ 0.23
PCDHA13-201ENST00000289272 TCTE1Q5JU00 501 aa16.51■□□□□ 0.23
PCDHA13-201ENST00000289272 PNPLA1Q8N8W4 532 aa16.51■□□□□ 0.23
PCDHA13-201ENST00000289272 METTL17Q9H7H0 456 aaPredicted RBP16.51■□□□□ 0.23
PCDHA13-201ENST00000289272 HEPACAM2A8MVW5 462 aa16.51■□□□□ 0.23
PCDHA13-201ENST00000289272 CTSOP43234 321 aaPredicted RBP16.51■□□□□ 0.23
PCDHA13-201ENST00000289272 CAMK2DQ13557 499 aa16.51■□□□□ 0.23
PCDHA13-201ENST00000289272 CYP27C1Q4G0S4 372 aa16.51■□□□□ 0.23
PCDHA13-201ENST00000289272 LRRC25Q8N386 305 aaPredicted RBP16.51■□□□□ 0.23
PCDHA13-201ENST00000289272 FAM46AQ96IP4 442 aaKnown RBP16.51■□□□□ 0.23
PCDHA13-201ENST00000289272 TOX2Q96NM4 488 aa16.51■□□□□ 0.23
PCDHA13-201ENST00000289272 DUSP21Q9H596 190 aa16.51■□□□□ 0.23
PCDHA13-201ENST00000289272 ATG4BQ9Y4P1 393 aa16.51■□□□□ 0.23
PCDHA13-201ENST00000289272 GGT3PA6NGU5 568 aa16.51■□□□□ 0.23
PCDHA13-201ENST00000289272 OIP5O43482 229 aa16.51■□□□□ 0.23
PCDHA13-201ENST00000289272 APBB3O95704 486 aa16.51■□□□□ 0.23
PCDHA13-201ENST00000289272 NKX3-2P78367 333 aa16.51■□□□□ 0.23
PCDHA13-201ENST00000289272 ZNF674Q2M3X9 581 aa16.51■□□□□ 0.23
PCDHA13-201ENST00000289272 FLYWCH1Q4VC44 716 aa16.51■□□□□ 0.23
PCDHA13-201ENST00000289272 CLLU1OSQ5K130 101 aa16.51■□□□□ 0.23
PCDHA13-201ENST00000289272 ZNF546Q86UE3 836 aa16.51■□□□□ 0.23
PCDHA13-201ENST00000289272 STK35Q8TDR2 534 aa16.51■□□□□ 0.23
PCDHA13-201ENST00000289272 ACTRT3Q9BYD9 372 aa16.51■□□□□ 0.23
PCDHA13-201ENST00000289272 V9GY05 133 aa16.51■□□□□ 0.23
PCDHA13-201ENST00000289272 IMPA2O14732 288 aa16.51■□□□□ 0.23
PCDHA13-201ENST00000289272 TCRBP04435 133 aa16.51■□□□□ 0.23
PCDHA13-201ENST00000289272 TBPL1P62380 186 aa16.51■□□□□ 0.23
PCDHA13-201ENST00000289272 C14orf28Q4W4Y0 310 aa16.51■□□□□ 0.23
PCDHA13-201ENST00000289272 CFAP77Q6ZQR2 320 aa16.51■□□□□ 0.23
PCDHA13-201ENST00000289272 CCDC71LQ8N9Z2 235 aa16.51■□□□□ 0.23
PCDHA13-201ENST00000289272 GPR148Q8TDV2 347 aa16.51■□□□□ 0.23
PCDHA13-201ENST00000289272 MYLIPQ8WY64 445 aa16.51■□□□□ 0.23
PCDHA13-201ENST00000289272 IL17CQ9P0M4 197 aa16.51■□□□□ 0.23
PCDHA13-201ENST00000289272 CPED1A4D0V7 1026 aa16.5■□□□□ 0.23
PCDHA13-201ENST00000289272 LILRB3O75022 631 aa16.5■□□□□ 0.23
PCDHA13-201ENST00000289272 CD3GP09693 182 aa16.5■□□□□ 0.23
PCDHA13-201ENST00000289272 ADRA1AP35348 466 aa16.5■□□□□ 0.23
PCDHA13-201ENST00000289272 MEF2AQ02078 507 aaPredicted RBP16.5■□□□□ 0.23
PCDHA13-201ENST00000289272 C18orf21Q32NC0 220 aaPredicted RBP16.5■□□□□ 0.23
PCDHA13-201ENST00000289272 PUS10Q3MIT2 529 aaKnown RBP16.5■□□□□ 0.23
PCDHA13-201ENST00000289272 SPATC1Q76KD6 591 aa16.5■□□□□ 0.23
PCDHA13-201ENST00000289272 SHFQ7M4L6 423 aa16.5■□□□□ 0.23
PCDHA13-201ENST00000289272 APCDD1Q8J025 514 aa16.5■□□□□ 0.23
PCDHA13-201ENST00000289272 LMX1AQ8TE12 382 aa16.5■□□□□ 0.23
PCDHA13-201ENST00000289272 ZDHHC12Q96GR4 267 aa16.5■□□□□ 0.23
PCDHA13-201ENST00000289272 NEURL2Q9BR09 285 aa16.5■□□□□ 0.23
PCDHA13-201ENST00000289272 ZNF736B4DX44 427 aaPredicted RBP16.5■□□□□ 0.23
PCDHA13-201ENST00000289272 TMEM127O75204 238 aa16.5■□□□□ 0.23
PCDHA13-201ENST00000289272 NDUFB2O95178 105 aa16.5■□□□□ 0.23
PCDHA13-201ENST00000289272 OR8U9P0C7N5 309 aa16.5■□□□□ 0.23
PCDHA13-201ENST00000289272 CDKN1CP49918 316 aaPredicted RBP16.5■□□□□ 0.23
PCDHA13-201ENST00000289272 RAB8AP61006 207 aa16.5■□□□□ 0.23
PCDHA13-201ENST00000289272 MEPCEQ7L2J0 689 aaKnown RBP16.5■□□□□ 0.23
PCDHA13-201ENST00000289272 COMMD6Q7Z4G1 85 aa16.5■□□□□ 0.23
PCDHA13-201ENST00000289272 ACVR1CQ8NER5 493 aa16.5■□□□□ 0.23
PCDHA13-201ENST00000289272 BOCQ9BWV1 1114 aa16.5■□□□□ 0.23
PCDHA13-201ENST00000289272 SAP130Q9H0E3 1048 aa16.5■□□□□ 0.23
PCDHA13-201ENST00000289272 PLAGL1Q9UM63 463 aa16.5■□□□□ 0.23
PCDHA13-201ENST00000289272 BCORQ6W2J9 1755 aa16.5■□□□□ 0.23
PCDHA13-201ENST00000289272 TRAV18A0A075B6X5 111 aa16.5■□□□□ 0.23
PCDHA13-201ENST00000289272 FZD7O75084 574 aa16.5■□□□□ 0.23
PCDHA13-201ENST00000289272 C5AR1P21730 350 aa16.5■□□□□ 0.23
PCDHA13-201ENST00000289272 HSD11B2P80365 405 aa16.5■□□□□ 0.23
PCDHA13-201ENST00000289272 SLC18B1Q6NT16 456 aa16.5■□□□□ 0.23
PCDHA13-201ENST00000289272 OR5H2Q8NGV7 314 aa16.5■□□□□ 0.23
PCDHA13-201ENST00000289272 ADAMTS18Q8TE60 1221 aa16.5■□□□□ 0.23
PCDHA13-201ENST00000289272 ACOT11Q8WXI4 607 aaPredicted RBP16.5■□□□□ 0.23
PCDHA13-201ENST00000289272 DOK1Q99704 481 aa16.5■□□□□ 0.23
PCDHA13-201ENST00000289272 CENPOQ9BU64 300 aa16.5■□□□□ 0.23
PCDHA13-201ENST00000289272 B3GAT2Q9NPZ5 323 aa16.5■□□□□ 0.23
PCDHA13-201ENST00000289272 SMCO4Q9NRQ5 59 aa16.5■□□□□ 0.23
PCDHA13-201ENST00000289272 WASF3Q9UPY6 502 aa16.5■□□□□ 0.23
PCDHA13-201ENST00000289272 FAM230AA0A1W2PPH8 454 aa16.5■□□□□ 0.23
PCDHA13-201ENST00000289272 BLOC1S5-TXNDC5H3BN57 136 aa16.5■□□□□ 0.23
PCDHA13-201ENST00000289272 GIPP09681 153 aaPredicted RBP16.5■□□□□ 0.23
PCDHA13-201ENST00000289272 SSTR4P31391 388 aa16.5■□□□□ 0.23
PCDHA13-201ENST00000289272 LSSP48449 732 aa16.5■□□□□ 0.23
PCDHA13-201ENST00000289272 DUSP7Q16829 419 aa16.5■□□□□ 0.23
PCDHA13-201ENST00000289272 ACTBL2Q562R1 376 aa16.5■□□□□ 0.23
PCDHA13-201ENST00000289272 PDSS1Q5T2R2 415 aa16.5■□□□□ 0.23
PCDHA13-201ENST00000289272 SIGIRRQ6IA17 410 aa16.5■□□□□ 0.23
PCDHA13-201ENST00000289272 GLB1L2Q8IW92 636 aa16.5■□□□□ 0.23
PCDHA13-201ENST00000289272 YIPF6Q96EC8 236 aa16.5■□□□□ 0.23
PCDHA13-201ENST00000289272 DOCK2Q92608 1830 aa16.5■□□□□ 0.23
PCDHA13-201ENST00000289272 ADAM23O75077 832 aa16.49■□□□□ 0.23
PCDHA13-201ENST00000289272 RAD51DO75771 328 aa16.49■□□□□ 0.23
PCDHA13-201ENST00000289272 ZNF140P52738 457 aaPredicted RBP16.49■□□□□ 0.23
PCDHA13-201ENST00000289272 GP2P55259 537 aaKnown RBP16.49■□□□□ 0.23
PCDHA13-201ENST00000289272 OR4C11Q6IEV9 310 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms