RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 THAP6Q8TBB0 222 aa10.83□□□□□ -0.68
CLSTN3-201ENST00000266546 RNF31Q96EP0 1072 aa10.83□□□□□ -0.68
CLSTN3-201ENST00000266546 OR2M4Q96R27 311 aa10.83□□□□□ -0.68
CLSTN3-201ENST00000266546 AIFM2Q9BRQ8 373 aa10.83□□□□□ -0.68
CLSTN3-201ENST00000266546 ZNF436Q9C0F3 470 aaPredicted RBP10.83□□□□□ -0.68
CLSTN3-201ENST00000266546 ZNF638Q14966 1978 aaKnown RBP10.83□□□□□ -0.68
CLSTN3-201ENST00000266546 DDCP20711 480 aa10.82□□□□□ -0.68
CLSTN3-201ENST00000266546 OPRD1P41143 372 aa10.82□□□□□ -0.68
CLSTN3-201ENST00000266546 RPL35P42766 123 aaKnown RBP10.82□□□□□ -0.68
CLSTN3-201ENST00000266546 CTSCP53634 463 aa10.82□□□□□ -0.68
CLSTN3-201ENST00000266546 ACTC1P68032 377 aa10.82□□□□□ -0.68
CLSTN3-201ENST00000266546 ACTA1P68133 377 aa10.82□□□□□ -0.68
CLSTN3-201ENST00000266546 COX20Q5RI15 118 aa10.82□□□□□ -0.68
CLSTN3-201ENST00000266546 IL20RBQ6UXL0 311 aa10.82□□□□□ -0.68
CLSTN3-201ENST00000266546 TECPR1Q7Z6L1 1165 aa10.82□□□□□ -0.68
CLSTN3-201ENST00000266546 NRMQ8IXM6 262 aa10.82□□□□□ -0.68
CLSTN3-201ENST00000266546 OR4F15Q8NGB8 312 aa10.82□□□□□ -0.68
CLSTN3-201ENST00000266546 OR2L2Q8NH16 312 aa10.82□□□□□ -0.68
CLSTN3-201ENST00000266546 SGTBQ96EQ0 304 aa10.82□□□□□ -0.68
CLSTN3-201ENST00000266546 SLC6A16Q9GZN6 736 aa10.82□□□□□ -0.68
CLSTN3-201ENST00000266546 MKKSQ9NPJ1 570 aaPredicted RBP10.82□□□□□ -0.68
CLSTN3-201ENST00000266546 LYARQ9NX58 379 aaKnown RBP10.82□□□□□ -0.68
CLSTN3-201ENST00000266546 DIMT1Q9UNQ2 313 aaKnown RBP10.82□□□□□ -0.68
CLSTN3-201ENST00000266546 CEP250Q9BV73 2442 aa10.82□□□□□ -0.68
CLSTN3-201ENST00000266546 RGS13O14921 159 aa10.82□□□□□ -0.68
CLSTN3-201ENST00000266546 AKR7A2O43488 359 aa10.82□□□□□ -0.68
CLSTN3-201ENST00000266546 TNFP01375 233 aa10.82□□□□□ -0.68
CLSTN3-201ENST00000266546 ACADLP28330 430 aa10.82□□□□□ -0.68
CLSTN3-201ENST00000266546 GUCA1AP43080 201 aaPredicted RBP10.82□□□□□ -0.68
CLSTN3-201ENST00000266546 KCNJ10P78508 379 aa10.82□□□□□ -0.68
CLSTN3-201ENST00000266546 SCGB2B2Q4G0G5 96 aa10.82□□□□□ -0.68
CLSTN3-201ENST00000266546 C3orf38Q5JPI3 329 aa10.82□□□□□ -0.68
CLSTN3-201ENST00000266546 RPTNQ6XPR3 784 aa10.82□□□□□ -0.68
CLSTN3-201ENST00000266546 C12orf40Q86WS4 652 aa10.82□□□□□ -0.68
CLSTN3-201ENST00000266546 TMEM163Q8TC26 289 aa10.82□□□□□ -0.68
CLSTN3-201ENST00000266546 NKD1Q969G9 470 aa10.82□□□□□ -0.68
CLSTN3-201ENST00000266546 OR2A14Q96R47 310 aa10.82□□□□□ -0.68
CLSTN3-201ENST00000266546 ACTL8Q9H568 366 aa10.82□□□□□ -0.68
CLSTN3-201ENST00000266546 GLS2Q9UI32 602 aa10.82□□□□□ -0.68
CLSTN3-201ENST00000266546 SCP2D1Q9UJQ7 156 aa10.82□□□□□ -0.68
CLSTN3-201ENST00000266546 TMEM5Q9Y2B1 443 aa10.82□□□□□ -0.68
CLSTN3-201ENST00000266546 ELOA3DA6NLF2 546 aaPredicted RBP10.82□□□□□ -0.68
CLSTN3-201ENST00000266546 GRK6P43250 576 aa10.82□□□□□ -0.68
CLSTN3-201ENST00000266546 TEKQ02763 1124 aa10.82□□□□□ -0.68
CLSTN3-201ENST00000266546 SMAD4Q13485 552 aaKnown RBP10.82□□□□□ -0.68
CLSTN3-201ENST00000266546 ELOA3BQ3SY89 546 aa10.82□□□□□ -0.68
CLSTN3-201ENST00000266546 MTFR2Q6P444 385 aa10.82□□□□□ -0.68
CLSTN3-201ENST00000266546 FAM180AQ6UWF9 173 aa10.82□□□□□ -0.68
CLSTN3-201ENST00000266546 CYHR1Q6ZMK1 362 aa10.82□□□□□ -0.68
CLSTN3-201ENST00000266546 ZNF627Q7L945 461 aa10.82□□□□□ -0.68
CLSTN3-201ENST00000266546 RASGEF1AQ8N9B8 481 aa10.82□□□□□ -0.68
CLSTN3-201ENST00000266546 TMEM145Q8NBT3 493 aa10.82□□□□□ -0.68
CLSTN3-201ENST00000266546 ELOA3Q8NG57 546 aa10.82□□□□□ -0.68
CLSTN3-201ENST00000266546 TM9SF4Q92544 642 aa10.82□□□□□ -0.68
CLSTN3-201ENST00000266546 PMEPA1Q969W9 287 aa10.82□□□□□ -0.68
CLSTN3-201ENST00000266546 SRRQ9GZT4 340 aa10.82□□□□□ -0.68
CLSTN3-201ENST00000266546 RSPH9Q9H1X1 276 aaPredicted RBP10.82□□□□□ -0.68
CLSTN3-201ENST00000266546 LIPT1Q9Y234 373 aa10.82□□□□□ -0.68
CLSTN3-201ENST00000266546 TRBV2A0A0J9YWF9 115 aa10.81□□□□□ -0.68
CLSTN3-201ENST00000266546 LINC01565O15544 149 aa10.81□□□□□ -0.68
CLSTN3-201ENST00000266546 PRAF2O60831 178 aa10.81□□□□□ -0.68
CLSTN3-201ENST00000266546 CSF3P09919 207 aa10.81□□□□□ -0.68
CLSTN3-201ENST00000266546 SOX2P48431 317 aa10.81□□□□□ -0.68
CLSTN3-201ENST00000266546 TAF13Q15543 124 aa10.81□□□□□ -0.68
CLSTN3-201ENST00000266546 LRRC37A5PQ49AS3 106 aa10.81□□□□□ -0.68
CLSTN3-201ENST00000266546 SDR16C5Q8N3Y7 309 aa10.81□□□□□ -0.68
CLSTN3-201ENST00000266546 FBXO15Q8NCQ5 510 aaPredicted RBP10.81□□□□□ -0.68
CLSTN3-201ENST00000266546 METTL17Q9H7H0 456 aaPredicted RBP10.81□□□□□ -0.68
CLSTN3-201ENST00000266546 DDX31Q9H8H2 851 aaKnown RBP10.81□□□□□ -0.68
CLSTN3-201ENST00000266546 NLRC5Q86WI3 1866 aa10.81□□□□□ -0.68
CLSTN3-201ENST00000266546 TCRBV21S2A2A0A5A6 115 aa10.81□□□□□ -0.68
CLSTN3-201ENST00000266546 UNC119BA6NIH7 251 aa10.81□□□□□ -0.68
CLSTN3-201ENST00000266546 XKRYO14609 159 aa10.81□□□□□ -0.68
CLSTN3-201ENST00000266546 TSPAN12O95859 305 aa10.81□□□□□ -0.68
CLSTN3-201ENST00000266546 SLC6A6P31641 620 aa10.81□□□□□ -0.68
CLSTN3-201ENST00000266546 ETV6P41212 452 aa10.81□□□□□ -0.68
CLSTN3-201ENST00000266546 MRPL19P49406 292 aaKnown RBP10.81□□□□□ -0.68
CLSTN3-201ENST00000266546 CDK3Q00526 305 aa10.81□□□□□ -0.68
CLSTN3-201ENST00000266546 SMCO1Q147U7 214 aa10.81□□□□□ -0.68
CLSTN3-201ENST00000266546 ARHGAP19Q14CB8 494 aa10.81□□□□□ -0.68
CLSTN3-201ENST00000266546 TIGD3Q6B0B8 471 aa10.81□□□□□ -0.68
CLSTN3-201ENST00000266546 ELP2Q6IA86 826 aa10.81□□□□□ -0.68
CLSTN3-201ENST00000266546 B3GLCTQ6Y288 498 aa10.81□□□□□ -0.68
CLSTN3-201ENST00000266546 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.81□□□□□ -0.68
CLSTN3-201ENST00000266546 FOXJ1Q92949 421 aa10.81□□□□□ -0.68
CLSTN3-201ENST00000266546 S100A13Q99584 98 aa10.81□□□□□ -0.68
CLSTN3-201ENST00000266546 GDF15Q99988 308 aa10.81□□□□□ -0.68
CLSTN3-201ENST00000266546 TIMM29Q9BSF4 260 aa10.81□□□□□ -0.68
CLSTN3-201ENST00000266546 POLDIP3Q9BY77 421 aaKnown RBP10.81□□□□□ -0.68
CLSTN3-201ENST00000266546 TMEM185BQ9H7F4 350 aa10.81□□□□□ -0.68
CLSTN3-201ENST00000266546 SLC6A13Q9NSD5 602 aa10.81□□□□□ -0.68
CLSTN3-201ENST00000266546 ZNF226Q9NYT6 803 aa10.81□□□□□ -0.68
CLSTN3-201ENST00000266546 KLHL9Q9P2J3 617 aa10.81□□□□□ -0.68
CLSTN3-201ENST00000266546 ZNF217O75362 1048 aa10.81□□□□□ -0.68
CLSTN3-201ENST00000266546 SLCO2B1O94956 709 aa10.81□□□□□ -0.68
CLSTN3-201ENST00000266546 PIPP12273 146 aaPredicted RBP10.81□□□□□ -0.68
CLSTN3-201ENST00000266546 VAMP1P23763 118 aa10.81□□□□□ -0.68
CLSTN3-201ENST00000266546 NAA10P41227 235 aaPredicted RBP10.81□□□□□ -0.68
CLSTN3-201ENST00000266546 ACTR1BP42025 376 aa10.81□□□□□ -0.68
CLSTN3-201ENST00000266546 ACTR1AP61163 376 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms