RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 MYEOVQ96EZ4 313 aa13.13□□□□□ -0.31
CDH3-201ENST00000264012 C1QTNF2Q9BXJ5 285 aa13.13□□□□□ -0.31
CDH3-201ENST00000264012 TEX13CA0A0J9YWL9 993 aa13.13□□□□□ -0.31
CDH3-201ENST00000264012 TMEM202A6NGA9 273 aa13.13□□□□□ -0.31
CDH3-201ENST00000264012 ACOT8O14734 319 aa13.13□□□□□ -0.31
CDH3-201ENST00000264012 BRINP1O60477 761 aa13.13□□□□□ -0.31
CDH3-201ENST00000264012 CDK1P06493 297 aa13.13□□□□□ -0.31
CDH3-201ENST00000264012 SFTPDP35247 375 aa13.13□□□□□ -0.31
CDH3-201ENST00000264012 KCNJ10P78508 379 aa13.13□□□□□ -0.31
CDH3-201ENST00000264012 TNFRSF17Q02223 184 aa13.13□□□□□ -0.31
CDH3-201ENST00000264012 EMX1Q04741 257 aaPredicted RBP13.13□□□□□ -0.31
CDH3-201ENST00000264012 RAB40BQ12829 278 aa13.13□□□□□ -0.31
CDH3-201ENST00000264012 CHRDL2Q6WN34 429 aa13.13□□□□□ -0.31
CDH3-201ENST00000264012 IGFN1Q86VF2 1251 aa13.13□□□□□ -0.31
CDH3-201ENST00000264012 SLC35F2Q8IXU6 374 aa13.13□□□□□ -0.31
CDH3-201ENST00000264012 ZNF100Q8IYN0 542 aa13.13□□□□□ -0.31
CDH3-201ENST00000264012 OR5AK2Q8NH90 309 aa13.13□□□□□ -0.31
CDH3-201ENST00000264012 OR14L1PQ8NHC6 308 aa13.13□□□□□ -0.31
CDH3-201ENST00000264012 CCDC120Q96HB5 630 aa13.13□□□□□ -0.31
CDH3-201ENST00000264012 DUSP23Q9BVJ7 150 aa13.13□□□□□ -0.31
CDH3-201ENST00000264012 IL37Q9NZH6 218 aa13.13□□□□□ -0.31
CDH3-201ENST00000264012 A0A1W2PQL4 384 aaPredicted RBP13.12□□□□□ -0.31
CDH3-201ENST00000264012 HSD11B2P80365 405 aa13.12□□□□□ -0.31
CDH3-201ENST00000264012 PARM1Q6UWI2 310 aa13.12□□□□□ -0.31
CDH3-201ENST00000264012 FAM83HQ6ZRV2 1179 aaPredicted RBP13.12□□□□□ -0.31
CDH3-201ENST00000264012 PIAS4Q8N2W9 510 aaPredicted RBP13.12□□□□□ -0.31
CDH3-201ENST00000264012 TMEM102Q8N9M5 508 aaPredicted RBP13.12□□□□□ -0.31
CDH3-201ENST00000264012 ASCC1Q8N9N2 400 aaKnown RBP13.12□□□□□ -0.31
CDH3-201ENST00000264012 AKAP1Q92667 903 aaKnown RBP eCLIP13.12□□□□□ -0.31
CDH3-201ENST00000264012 TEX37Q96LM6 180 aa13.12□□□□□ -0.31
CDH3-201ENST00000264012 OR4K3Q96R72 315 aa13.12□□□□□ -0.31
CDH3-201ENST00000264012 LYSMD1Q96S90 227 aa13.12□□□□□ -0.31
CDH3-201ENST00000264012 POTEKPQ9BYX7 375 aa13.12□□□□□ -0.31
CDH3-201ENST00000264012 SLC6A17Q9H1V8 727 aa13.12□□□□□ -0.31
CDH3-201ENST00000264012 H3BNC9 293 aa13.12□□□□□ -0.31
CDH3-201ENST00000264012 AQP9O43315 295 aa13.12□□□□□ -0.31
CDH3-201ENST00000264012 APOC1P02654 83 aa13.12□□□□□ -0.31
CDH3-201ENST00000264012 C21orf33P30042 268 aaPredicted RBP13.12□□□□□ -0.31
CDH3-201ENST00000264012 OR1D4P47884 311 aa13.12□□□□□ -0.31
CDH3-201ENST00000264012 RIN1Q13671 783 aa13.12□□□□□ -0.31
CDH3-201ENST00000264012 NR0B2Q15466 257 aa13.12□□□□□ -0.31
CDH3-201ENST00000264012 B3GNT8Q7Z7M8 397 aa13.12□□□□□ -0.31
CDH3-201ENST00000264012 SYT14Q8NB59 555 aa13.12□□□□□ -0.31
CDH3-201ENST00000264012 C16orf58Q96GQ5 468 aa13.12□□□□□ -0.31
CDH3-201ENST00000264012 TCTN2Q96GX1 697 aa13.12□□□□□ -0.31
CDH3-201ENST00000264012 KLHL15Q96M94 604 aa13.12□□□□□ -0.31
CDH3-201ENST00000264012 CCDC32Q9BV29 185 aa13.12□□□□□ -0.31
CDH3-201ENST00000264012 OR2B2Q9GZK3 357 aa13.12□□□□□ -0.31
CDH3-201ENST00000264012 OR51E2Q9H255 320 aa13.12□□□□□ -0.31
CDH3-201ENST00000264012 CPNE5Q9HCH3 593 aa13.12□□□□□ -0.31
CDH3-201ENST00000264012 CIB4A0PJX0 185 aa13.12□□□□□ -0.31
CDH3-201ENST00000264012 BCAT2O15382 392 aaPredicted RBP13.12□□□□□ -0.31
CDH3-201ENST00000264012 KCNK5O95279 499 aa13.12□□□□□ -0.31
CDH3-201ENST00000264012 LCN1P31025 176 aa13.12□□□□□ -0.31
CDH3-201ENST00000264012 ART1P52961 327 aa13.12□□□□□ -0.31
CDH3-201ENST00000264012 CTBP2P56545 445 aa13.12□□□□□ -0.31
CDH3-201ENST00000264012 MRPL49Q13405 166 aaKnown RBP13.12□□□□□ -0.31
CDH3-201ENST00000264012 PIWIL3Q7Z3Z3 882 aaKnown RBP13.12□□□□□ -0.31
CDH3-201ENST00000264012 RABEPKQ7Z6M1 372 aa13.12□□□□□ -0.31
CDH3-201ENST00000264012 ZSCAN4Q8NAM6 433 aaPredicted RBP13.12□□□□□ -0.31
CDH3-201ENST00000264012 MNTQ99583 582 aa13.12□□□□□ -0.31
CDH3-201ENST00000264012 THSD1Q9NS62 852 aa13.12□□□□□ -0.31
CDH3-201ENST00000264012 CUTCQ9NTM9 273 aa13.12□□□□□ -0.31
CDH3-201ENST00000264012 CNOT2Q9NZN8 540 aaKnown RBP13.12□□□□□ -0.31
CDH3-201ENST00000264012 MGAT4AQ9UM21 535 aa13.12□□□□□ -0.31
CDH3-201ENST00000264012 K7ESM1 405 aa13.12□□□□□ -0.31
CDH3-201ENST00000264012 B4GALT3O60512 393 aa13.12□□□□□ -0.31
CDH3-201ENST00000264012 RBMS1P29558 406 aaKnown RBP13.12□□□□□ -0.31
CDH3-201ENST00000264012 GIPRP48546 466 aa13.12□□□□□ -0.31
CDH3-201ENST00000264012 CSNK1EP49674 416 aaKnown RBP13.12□□□□□ -0.31
CDH3-201ENST00000264012 ERVK-25P63136 954 aa13.12□□□□□ -0.31
CDH3-201ENST00000264012 EFR3AQ14156 821 aa13.12□□□□□ -0.31
CDH3-201ENST00000264012 GPR18Q14330 331 aa13.12□□□□□ -0.31
CDH3-201ENST00000264012 OR1Q1Q15612 314 aa13.12□□□□□ -0.31
CDH3-201ENST00000264012 XKR7Q5GH72 579 aa13.12□□□□□ -0.31
CDH3-201ENST00000264012 C19orf47Q8N9M1 422 aaKnown RBP13.12□□□□□ -0.31
CDH3-201ENST00000264012 NAT6Q93015 286 aa13.12□□□□□ -0.31
CDH3-201ENST00000264012 HLA-CQ95604 372 aa13.12□□□□□ -0.31
CDH3-201ENST00000264012 LMF2Q9BU23 707 aaKnown RBP13.12□□□□□ -0.31
CDH3-201ENST00000264012 CXorf36Q9H7Y0 433 aa13.12□□□□□ -0.31
CDH3-201ENST00000264012 DDX31Q9H8H2 851 aaKnown RBP13.12□□□□□ -0.31
CDH3-201ENST00000264012 GPN2Q9H9Y4 310 aaPredicted RBP13.12□□□□□ -0.31
CDH3-201ENST00000264012 ZNF701Q9NV72 531 aaPredicted RBP13.12□□□□□ -0.31
CDH3-201ENST00000264012 ECM29Q5VYK3 1845 aa13.11□□□□□ -0.31
CDH3-201ENST00000264012 A6NCN8 305 aa13.11□□□□□ -0.31
CDH3-201ENST00000264012 POLR2IP36954 125 aaKnown RBP13.11□□□□□ -0.31
CDH3-201ENST00000264012 PRKXP51817 358 aa13.11□□□□□ -0.31
CDH3-201ENST00000264012 SHHQ15465 462 aa13.11□□□□□ -0.31
CDH3-201ENST00000264012 LEXMQ3ZCV2 418 aa13.11□□□□□ -0.31
CDH3-201ENST00000264012 ABHD17BQ5VST6 288 aa13.11□□□□□ -0.31
CDH3-201ENST00000264012 EIF5AL1Q6IS14 154 aaKnown RBP13.11□□□□□ -0.31
CDH3-201ENST00000264012 FAM174AQ8TBP5 190 aa13.11□□□□□ -0.31
CDH3-201ENST00000264012 TP63Q9H3D4 680 aaPredicted RBP13.11□□□□□ -0.31
CDH3-201ENST00000264012 UBQLN4Q9NRR5 601 aa13.11□□□□□ -0.31
CDH3-201ENST00000264012 CEPT1Q9Y6K0 416 aa13.11□□□□□ -0.31
CDH3-201ENST00000264012 SLC5A10A0PJK1 596 aa13.11□□□□□ -0.31
CDH3-201ENST00000264012 BLACEA4D250 179 aa13.11□□□□□ -0.31
CDH3-201ENST00000264012 SCGNO76038 276 aa13.11□□□□□ -0.31
CDH3-201ENST00000264012 OPRL1P41146 370 aa13.11□□□□□ -0.31
CDH3-201ENST00000264012 TDGQ13569 410 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms