RNA–Protein interactions for RNA: ENST00000262327.9

LIG3-201, Transcript of DNA ligase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIG3, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-201ENST00000262327 TFPIP10646 304 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 ARSBP15848 533 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 CPN2P22792 545 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 RFX3P48380 749 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 RPS7P62081 194 aaKnown RBP9.37□□□□□ -0.91
LIG3-201ENST00000262327 ABATP80404 500 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 TSPAN31Q12999 210 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 NDUFA9Q16795 377 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 HNRNPA1L2Q32P51 320 aaKnown RBP9.37□□□□□ -0.91
LIG3-201ENST00000262327 TANGO2Q6ICL3 276 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 ERN2Q76MJ5 926 aaKnown RBP9.37□□□□□ -0.91
LIG3-201ENST00000262327 ARIH2OSQ8N7S6 290 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 KCT2Q8NC54 265 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 ZNF485Q8NCK3 441 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 TTLQ8NG68 377 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 OR4M1Q8NGD0 313 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 OR2A1Q8NGT9 310 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 PIGXQ8TBF5 258 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 TMEM43Q9BTV4 400 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 OR51V1Q9H2C8 321 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 PELI2Q9HAT8 420 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 KLHL1Q9NR64 748 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 TNFRSF10DQ9UBN6 386 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 TEKT2Q9UIF3 430 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 ENTPD4Q9Y227 616 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 MRPS7Q9Y2R9 242 aaKnown RBP9.37□□□□□ -0.91
LIG3-201ENST00000262327 EXOSC1Q9Y3B2 195 aaKnown RBP9.37□□□□□ -0.91
LIG3-201ENST00000262327 TRDV1A0A1B0GX56 115 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 TBC1D3BA6NDS4 549 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 INMT-MINDY4F8WBC2 141 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 SURF4O15260 269 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 VEGFDO43915 354 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 DNAJB6O75190 326 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 OR2B3O76000 313 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 CLUP10909 449 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 PRG2P13727 222 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 GCGRP47871 477 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 SLC3A1Q07837 685 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 TRAM2Q15035 370 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 BCL2L15Q5TBC7 163 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 RNLSQ5VYX0 342 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 METRNLQ641Q3 311 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 MZT2BQ6NZ67 158 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 FAM111BQ6SJ93 734 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 CD300LDQ6UXZ3 194 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 TMEM151BQ8IW70 566 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 ETFBKMTQ8IXQ9 262 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 TMEFF1Q8IYR6 380 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 KLHL36Q8N4N3 616 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 DIO2Q92813 273 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 MYADMQ96S97 322 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 SLC7A7Q9UM01 511 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 SPTBN5Q9NRC6 3674 aaKnown RBP9.37□□□□□ -0.91
LIG3-201ENST00000262327 KDM4EB2RXH2 506 aaPredicted RBP9.37□□□□□ -0.91
LIG3-201ENST00000262327 EEF1E1O43324 174 aaKnown RBP9.37□□□□□ -0.91
LIG3-201ENST00000262327 AKAP8O43823 692 aaKnown RBP9.37□□□□□ -0.91
LIG3-201ENST00000262327 OR7A10O76100 309 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 HLA-DPB1P04440 258 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 GYPBP06028 91 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 SPTBP11277 2137 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 GSTM3P21266 225 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 HIST1H1TP22492 207 aaPredicted RBP9.37□□□□□ -0.91
LIG3-201ENST00000262327 ACVR1BP36896 505 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 GZMKP49863 264 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 GPR68Q15743 365 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 EOGTQ5NDL2 527 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 AADACL4Q5VUY2 407 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 VITQ6UXI7 678 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 GDF7Q7Z4P5 450 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 YAF2Q8IY57 180 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 SAMD12Q8N8I0 201 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 CYB561A3Q8NBI2 242 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 OR10H4Q8NGA5 316 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 OR13C5Q8NGS8 318 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 PFN4Q8NHR9 129 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 CDS1Q92903 461 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 MS4A6EQ96DS6 147 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 SPATA5L1Q9BVQ7 753 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 FAIM2Q9BWQ8 316 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.37□□□□□ -0.91
LIG3-201ENST00000262327 KCNN2Q9H2S1 579 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 SERGEFQ9UGK8 458 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 CBLCQ9ULV8 474 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 ASB4Q9Y574 426 aa9.37□□□□□ -0.91
LIG3-201ENST00000262327 KIF26AQ9ULI4 1882 aaPredicted RBP9.37□□□□□ -0.91
LIG3-201ENST00000262327 MDC1Q14676 2089 aaKnown RBP9.36□□□□□ -0.91
LIG3-201ENST00000262327 A8MUA0 341 aa9.36□□□□□ -0.91
LIG3-201ENST00000262327 EIF4EP06730 217 aaKnown RBP9.36□□□□□ -0.91
LIG3-201ENST00000262327 LAMP2P13473 410 aa9.36□□□□□ -0.91
LIG3-201ENST00000262327 UQCRC1P31930 480 aa9.36□□□□□ -0.91
LIG3-201ENST00000262327 BTN3A2P78410 334 aa9.36□□□□□ -0.91
LIG3-201ENST00000262327 PRDX1Q06830 199 aaKnown RBP9.36□□□□□ -0.91
LIG3-201ENST00000262327 ST3GAL3Q11203 375 aa9.36□□□□□ -0.91
LIG3-201ENST00000262327 FZD5Q13467 585 aa9.36□□□□□ -0.91
LIG3-201ENST00000262327 ELAVL3Q14576 367 aaKnown RBP9.36□□□□□ -0.91
LIG3-201ENST00000262327 LAMTOR1Q6IAA8 161 aa9.36□□□□□ -0.91
LIG3-201ENST00000262327 ESPNLQ6ZVH7 1005 aa9.36□□□□□ -0.91
LIG3-201ENST00000262327 LILRB2Q8N423 598 aa9.36□□□□□ -0.91
LIG3-201ENST00000262327 LRRC20Q8TCA0 184 aa9.36□□□□□ -0.91
LIG3-201ENST00000262327 SLC35A4Q96G79 324 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms