RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 ARRDC5A6NEK1 342 aa12.6□□□□□ -0.39
VMP1-201ENST00000262291 K7ESF4 209 aa12.6□□□□□ -0.39
VMP1-201ENST00000262291 BCAT2O15382 392 aaPredicted RBP12.6□□□□□ -0.39
VMP1-201ENST00000262291 UPK1BO75841 260 aa12.6□□□□□ -0.39
VMP1-201ENST00000262291 IFNA16P05015 189 aa12.6□□□□□ -0.39
VMP1-201ENST00000262291 CD36P16671 472 aa12.6□□□□□ -0.39
VMP1-201ENST00000262291 GNG2P59768 71 aa12.6□□□□□ -0.39
VMP1-201ENST00000262291 CFHR1Q03591 330 aa12.6□□□□□ -0.39
VMP1-201ENST00000262291 ZP2Q05996 745 aa12.6□□□□□ -0.39
VMP1-201ENST00000262291 ILKQ13418 452 aa12.6□□□□□ -0.39
VMP1-201ENST00000262291 CCBE1Q6UXH8 406 aaPredicted RBP12.6□□□□□ -0.39
VMP1-201ENST00000262291 CASP12Q6UXS9 341 aa12.6□□□□□ -0.39
VMP1-201ENST00000262291 TTLL10Q6ZVT0 673 aa12.6□□□□□ -0.39
VMP1-201ENST00000262291 NRMQ8IXM6 262 aa12.6□□□□□ -0.39
VMP1-201ENST00000262291 SLC25A45Q8N413 288 aa12.6□□□□□ -0.39
VMP1-201ENST00000262291 OR8D4Q8NGM9 314 aa12.6□□□□□ -0.39
VMP1-201ENST00000262291 IPCEF1Q8WWN9 437 aaPredicted RBP12.6□□□□□ -0.39
VMP1-201ENST00000262291 RIT1Q92963 219 aa12.6□□□□□ -0.39
VMP1-201ENST00000262291 SLC38A4Q969I6 547 aa12.6□□□□□ -0.39
VMP1-201ENST00000262291 RBM18Q96H35 190 aaKnown RBP12.6□□□□□ -0.39
VMP1-201ENST00000262291 RNF167Q9H6Y7 350 aa12.6□□□□□ -0.39
VMP1-201ENST00000262291 CLN6Q9NWW5 311 aa12.6□□□□□ -0.39
VMP1-201ENST00000262291 KLHL28Q9NXS3 571 aa12.6□□□□□ -0.39
VMP1-201ENST00000262291 CRNNQ9UBG3 495 aaPredicted RBP12.6□□□□□ -0.39
VMP1-201ENST00000262291 MUTYHQ9UIF7 546 aa12.6□□□□□ -0.39
VMP1-201ENST00000262291 ZNF221Q9UK13 617 aa12.6□□□□□ -0.39
VMP1-201ENST00000262291 SIT1Q9Y3P8 196 aa12.6□□□□□ -0.39
VMP1-201ENST00000262291 AGAP5A6NIR3 686 aa12.6□□□□□ -0.39
VMP1-201ENST00000262291 PLOD3O60568 738 aa12.6□□□□□ -0.39
VMP1-201ENST00000262291 STX11O75558 287 aa12.6□□□□□ -0.39
VMP1-201ENST00000262291 IGKV1D-16P01601 117 aa12.6□□□□□ -0.39
VMP1-201ENST00000262291 RNH1P13489 461 aaKnown RBP12.6□□□□□ -0.39
VMP1-201ENST00000262291 ST13P50502 369 aaKnown RBP12.6□□□□□ -0.39
VMP1-201ENST00000262291 NDUFAF6Q330K2 333 aa12.6□□□□□ -0.39
VMP1-201ENST00000262291 MANEAQ5SRI9 462 aa12.6□□□□□ -0.39
VMP1-201ENST00000262291 RRM2BQ7LG56 351 aa12.6□□□□□ -0.39
VMP1-201ENST00000262291 SVOPQ8N4V2 548 aa12.6□□□□□ -0.39
VMP1-201ENST00000262291 MYDGFQ969H8 173 aa12.6□□□□□ -0.39
VMP1-201ENST00000262291 YIPF6Q96EC8 236 aa12.6□□□□□ -0.39
VMP1-201ENST00000262291 SLC41A3Q96GZ6 507 aa12.6□□□□□ -0.39
VMP1-201ENST00000262291 OR5M11Q96RB7 305 aa12.6□□□□□ -0.39
VMP1-201ENST00000262291 SIGLEC11Q96RL6 698 aa12.6□□□□□ -0.39
VMP1-201ENST00000262291 OR2B2Q9GZK3 357 aa12.6□□□□□ -0.39
VMP1-201ENST00000262291 CCNB1IP1Q9NPC3 277 aa12.6□□□□□ -0.39
VMP1-201ENST00000262291 FBXO8Q9NRD0 319 aa12.6□□□□□ -0.39
VMP1-201ENST00000262291 PRTFDC1Q9NRG1 225 aa12.6□□□□□ -0.39
VMP1-201ENST00000262291 M0R082 166 aa12.59□□□□□ -0.39
VMP1-201ENST00000262291 ERVH48-1M5A8F1 160 aa12.59□□□□□ -0.39
VMP1-201ENST00000262291 CDK2AP1O14519 115 aa12.59□□□□□ -0.39
VMP1-201ENST00000262291 HYAL3O43820 417 aaPredicted RBP12.59□□□□□ -0.39
VMP1-201ENST00000262291 HTR2AP28223 471 aa12.59□□□□□ -0.39
VMP1-201ENST00000262291 PRKAR1BP31321 381 aa12.59□□□□□ -0.39
VMP1-201ENST00000262291 PPP5CP53041 499 aa12.59□□□□□ -0.39
VMP1-201ENST00000262291 CDC20Q12834 499 aa12.59□□□□□ -0.39
VMP1-201ENST00000262291 LARS2Q15031 903 aaKnown RBP12.59□□□□□ -0.39
VMP1-201ENST00000262291 SLC35F3Q8IY50 421 aa12.59□□□□□ -0.39
VMP1-201ENST00000262291 CDRT4Q8N9R6 151 aa12.59□□□□□ -0.39
VMP1-201ENST00000262291 GRHL3Q8TE85 626 aa12.59□□□□□ -0.39
VMP1-201ENST00000262291 LMF1Q96S06 567 aa12.59□□□□□ -0.39
VMP1-201ENST00000262291 C6orf62Q9GZU0 229 aaPredicted RBP12.59□□□□□ -0.39
VMP1-201ENST00000262291 ZNF350Q9GZX5 532 aa12.59□□□□□ -0.39
VMP1-201ENST00000262291 CACYBPQ9HB71 228 aaKnown RBP12.59□□□□□ -0.39
VMP1-201ENST00000262291 PDE7BQ9NP56 450 aa12.59□□□□□ -0.39
VMP1-201ENST00000262291 PAQR5Q9NXK6 330 aaPredicted RBP12.59□□□□□ -0.39
VMP1-201ENST00000262291 CLEC2DQ9UHP7 191 aa12.59□□□□□ -0.39
VMP1-201ENST00000262291 ERVK-19Q9WJR5 959 aa12.59□□□□□ -0.39
VMP1-201ENST00000262291 PCDHGB1Q9Y5G3 927 aa12.59□□□□□ -0.39
VMP1-201ENST00000262291 TMEM150CB9EJG8 249 aa12.59□□□□□ -0.39
VMP1-201ENST00000262291 GNB5O14775 395 aa12.59□□□□□ -0.39
VMP1-201ENST00000262291 SLC35E2P0CK97 266 aa12.59□□□□□ -0.39
VMP1-201ENST00000262291 GNSP15586 552 aa12.59□□□□□ -0.39
VMP1-201ENST00000262291 GRK5P34947 590 aa12.59□□□□□ -0.39
VMP1-201ENST00000262291 GABRA4P48169 554 aa12.59□□□□□ -0.39
VMP1-201ENST00000262291 SERPINB10P48595 397 aa12.59□□□□□ -0.39
VMP1-201ENST00000262291 DHPSP49366 369 aaPredicted RBP12.59□□□□□ -0.39
VMP1-201ENST00000262291 ZNF136P52737 540 aa12.59□□□□□ -0.39
VMP1-201ENST00000262291 EEF1A1P68104 462 aaKnown RBP12.59□□□□□ -0.39
VMP1-201ENST00000262291 POU6F2P78424 691 aaPredicted RBP12.59□□□□□ -0.39
VMP1-201ENST00000262291 TRAM2Q15035 370 aa12.59□□□□□ -0.39
VMP1-201ENST00000262291 TIGD6Q17RP2 521 aa12.59□□□□□ -0.39
VMP1-201ENST00000262291 PDZK1Q5T2W1 519 aa12.59□□□□□ -0.39
VMP1-201ENST00000262291 SYT6Q5T7P8 510 aaPredicted RBP12.59□□□□□ -0.39
VMP1-201ENST00000262291 SLX4IPQ5VYV7 408 aa12.59□□□□□ -0.39
VMP1-201ENST00000262291 PAQR6Q6TCH4 344 aa12.59□□□□□ -0.39
VMP1-201ENST00000262291 WDR88Q6ZMY6 472 aa12.59□□□□□ -0.39
VMP1-201ENST00000262291 P2RY8Q86VZ1 359 aa12.59□□□□□ -0.39
VMP1-201ENST00000262291 GRAMD2AQ8IUY3 354 aa12.59□□□□□ -0.39
VMP1-201ENST00000262291 ZNF619Q8N2I2 560 aa12.59□□□□□ -0.39
VMP1-201ENST00000262291 OR51Q1Q8NH59 317 aa12.59□□□□□ -0.39
VMP1-201ENST00000262291 MAP6Q96JE9 813 aa12.59□□□□□ -0.39
VMP1-201ENST00000262291 SP140LQ9H930 580 aa12.59□□□□□ -0.39
VMP1-201ENST00000262291 NECTIN3Q9NQS3 549 aa12.59□□□□□ -0.39
VMP1-201ENST00000262291 PLCL2Q9UPR0 1127 aa12.59□□□□□ -0.39
VMP1-201ENST00000262291 SYT5O00445 386 aa12.58□□□□□ -0.4
VMP1-201ENST00000262291 HRO43593 1189 aa12.58□□□□□ -0.4
VMP1-201ENST00000262291 ADORA3P0DMS8 318 aa12.58□□□□□ -0.4
VMP1-201ENST00000262291 S1PR1P21453 382 aa12.58□□□□□ -0.4
VMP1-201ENST00000262291 TGFBR2P37173 567 aa12.58□□□□□ -0.4
VMP1-201ENST00000262291 PLAURQ03405 335 aa12.58□□□□□ -0.4
VMP1-201ENST00000262291 MED22Q15528 200 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms