RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 C14orf28Q4W4Y0 310 aa13.48□□□□□ -0.25
CUX2-201ENST00000261726 FNDC9Q8TBE3 224 aa13.48□□□□□ -0.25
CUX2-201ENST00000261726 POLHQ9Y253 713 aa13.48□□□□□ -0.25
CUX2-201ENST00000261726 SULT2B1O00204 365 aa13.48□□□□□ -0.25
CUX2-201ENST00000261726 PIP5K1CO60331 668 aa13.48□□□□□ -0.25
CUX2-201ENST00000261726 ARSBP15848 533 aa13.48□□□□□ -0.25
CUX2-201ENST00000261726 GABARAPL2P60520 117 aa13.48□□□□□ -0.25
CUX2-201ENST00000261726 CYCSP99999 105 aaKnown RBP13.48□□□□□ -0.25
CUX2-201ENST00000261726 MGAT3Q09327 533 aa13.48□□□□□ -0.25
CUX2-201ENST00000261726 TCTE1Q5JU00 501 aa13.48□□□□□ -0.25
CUX2-201ENST00000261726 CPOQ8IVL8 374 aa13.48□□□□□ -0.25
CUX2-201ENST00000261726 NAGSQ8N159 534 aa13.48□□□□□ -0.25
CUX2-201ENST00000261726 C12orf45Q8N5I9 185 aaPredicted RBP13.48□□□□□ -0.25
CUX2-201ENST00000261726 MYLIPQ8WY64 445 aa13.48□□□□□ -0.25
CUX2-201ENST00000261726 HHIPL1Q96JK4 782 aa13.48□□□□□ -0.25
CUX2-201ENST00000261726 SERINC2Q96SA4 455 aa13.48□□□□□ -0.25
CUX2-201ENST00000261726 LHPPQ9H008 270 aa13.48□□□□□ -0.25
CUX2-201ENST00000261726 OR10A5Q9H207 317 aa13.48□□□□□ -0.25
CUX2-201ENST00000261726 OR10A2Q9H208 303 aa13.48□□□□□ -0.25
CUX2-201ENST00000261726 GPN2Q9H9Y4 310 aaPredicted RBP13.48□□□□□ -0.25
CUX2-201ENST00000261726 DYNLRB1Q9NP97 96 aa13.48□□□□□ -0.25
CUX2-201ENST00000261726 GHRLQ9UBU3 117 aa13.48□□□□□ -0.25
CUX2-201ENST00000261726 CAMK2AQ9UQM7 478 aa13.48□□□□□ -0.25
CUX2-201ENST00000261726 ATG4BQ9Y4P1 393 aa13.48□□□□□ -0.25
CUX2-201ENST00000261726 NDUFB2O95178 105 aa13.47□□□□□ -0.25
CUX2-201ENST00000261726 OSMP13725 252 aa13.47□□□□□ -0.25
CUX2-201ENST00000261726 ZNF44P15621 663 aa13.47□□□□□ -0.25
CUX2-201ENST00000261726 ETV4P43268 484 aa13.47□□□□□ -0.25
CUX2-201ENST00000261726 RUNX2Q13950 521 aa13.47□□□□□ -0.25
CUX2-201ENST00000261726 SNAPC3Q92966 411 aa13.47□□□□□ -0.25
CUX2-201ENST00000261726 ZFYVE21Q9BQ24 234 aa13.47□□□□□ -0.25
CUX2-201ENST00000261726 KCNJ16Q9NPI9 418 aa13.47□□□□□ -0.25
CUX2-201ENST00000261726 ZNF355PQ9NSJ1 428 aa13.47□□□□□ -0.25
CUX2-201ENST00000261726 PCYT1BQ9Y5K3 369 aaPredicted RBP13.47□□□□□ -0.25
CUX2-201ENST00000261726 MYH3P11055 1940 aa13.47□□□□□ -0.25
CUX2-201ENST00000261726 FRS3O43559 492 aa13.47□□□□□ -0.25
CUX2-201ENST00000261726 TGM6O95932 706 aa13.47□□□□□ -0.25
CUX2-201ENST00000261726 CNIH2Q6PI25 160 aa13.47□□□□□ -0.25
CUX2-201ENST00000261726 TECPR1Q7Z6L1 1165 aa13.47□□□□□ -0.25
CUX2-201ENST00000261726 CD163Q86VB7 1156 aa13.47□□□□□ -0.25
CUX2-201ENST00000261726 TMEM185AQ8NFB2 350 aa13.47□□□□□ -0.25
CUX2-201ENST00000261726 RNF128Q8TEB7 428 aa13.47□□□□□ -0.25
CUX2-201ENST00000261726 ZNF419Q96HQ0 510 aaPredicted RBP13.47□□□□□ -0.25
CUX2-201ENST00000261726 FAM234AQ9H0X4 552 aa13.47□□□□□ -0.25
CUX2-201ENST00000261726 HIPK2Q9H2X6 1198 aa13.47□□□□□ -0.25
CUX2-201ENST00000261726 PTRH2Q9Y3E5 179 aaKnown RBP13.47□□□□□ -0.25
CUX2-201ENST00000261726 CACNG2Q9Y698 323 aa13.47□□□□□ -0.25
CUX2-201ENST00000261726 AIPO00170 330 aa13.47□□□□□ -0.25
CUX2-201ENST00000261726 RPS18P62269 152 aaKnown RBP13.47□□□□□ -0.25
CUX2-201ENST00000261726 FGL2Q14314 439 aa13.47□□□□□ -0.25
CUX2-201ENST00000261726 HABP2Q14520 560 aaPredicted RBP13.47□□□□□ -0.25
CUX2-201ENST00000261726 COQ5Q5HYK3 327 aa13.47□□□□□ -0.25
CUX2-201ENST00000261726 HEPHL1Q6MZM0 1159 aa13.47□□□□□ -0.25
CUX2-201ENST00000261726 MCATQ8IVS2 390 aaKnown RBP13.47□□□□□ -0.25
CUX2-201ENST00000261726 OR5AR1Q8NGP9 310 aa13.47□□□□□ -0.25
CUX2-201ENST00000261726 SLC2A11Q9BYW1 496 aa13.47□□□□□ -0.25
CUX2-201ENST00000261726 PRMT8Q9NR22 394 aaPredicted RBP13.47□□□□□ -0.25
CUX2-201ENST00000261726 ARPC1BO15143 372 aaKnown RBP13.47□□□□□ -0.25
CUX2-201ENST00000261726 ENSAO43768 121 aaKnown RBP13.47□□□□□ -0.25
CUX2-201ENST00000261726 CD70P32970 193 aa13.47□□□□□ -0.25
CUX2-201ENST00000261726 ACY1Q03154 408 aa13.47□□□□□ -0.25
CUX2-201ENST00000261726 PIN1Q13526 163 aaPredicted RBP13.47□□□□□ -0.25
CUX2-201ENST00000261726 SLC22A6Q4U2R8 563 aa13.47□□□□□ -0.25
CUX2-201ENST00000261726 EXOSC6Q5RKV6 272 aaKnown RBP13.47□□□□□ -0.25
CUX2-201ENST00000261726 PIP5KL1Q5T9C9 394 aa13.47□□□□□ -0.25
CUX2-201ENST00000261726 ZNF852Q6ZMS4 543 aa13.47□□□□□ -0.25
CUX2-201ENST00000261726 MOB3CQ70IA8 216 aa13.47□□□□□ -0.25
CUX2-201ENST00000261726 GOLM1Q8NBJ4 401 aa13.47□□□□□ -0.25
CUX2-201ENST00000261726 MS4A4EQ96PG1 132 aa13.47□□□□□ -0.25
CUX2-201ENST00000261726 NENFQ9UMX5 172 aa13.47□□□□□ -0.25
CUX2-201ENST00000261726 PCDHGA1Q9Y5H4 931 aa13.47□□□□□ -0.25
CUX2-201ENST00000261726 TYROBPO43914 113 aa13.47□□□□□ -0.25
CUX2-201ENST00000261726 CRHBPP24387 322 aa13.47□□□□□ -0.25
CUX2-201ENST00000261726 SPINT3P49223 89 aa13.47□□□□□ -0.25
CUX2-201ENST00000261726 MICAQ29983 383 aa13.47□□□□□ -0.25
CUX2-201ENST00000261726 ST7LQ8TDW4 575 aa13.47□□□□□ -0.25
CUX2-201ENST00000261726 UHRF1Q96T88 793 aaPredicted RBP13.47□□□□□ -0.25
CUX2-201ENST00000261726 MCTS1Q9ULC4 181 aaKnown RBP13.47□□□□□ -0.25
CUX2-201ENST00000261726 PLIN4Q96Q06 1357 aa13.47□□□□□ -0.25
CUX2-201ENST00000261726 ARPC4-TTLL3A0A0A6YYG9 625 aa13.47□□□□□ -0.25
CUX2-201ENST00000261726 AKAIN1P0CW23 69 aa13.47□□□□□ -0.25
CUX2-201ENST00000261726 FDXRP22570 491 aa13.47□□□□□ -0.25
CUX2-201ENST00000261726 ITGB8P26012 769 aa13.47□□□□□ -0.25
CUX2-201ENST00000261726 PTGER1P34995 402 aa13.47□□□□□ -0.25
CUX2-201ENST00000261726 SF3A2Q15428 464 aaKnown RBP13.47□□□□□ -0.25
CUX2-201ENST00000261726 CST9LP1Q5W188 147 aa13.47□□□□□ -0.25
CUX2-201ENST00000261726 SLC15A4Q8N697 577 aa13.47□□□□□ -0.25
CUX2-201ENST00000261726 HCAR1Q9BXC0 346 aa13.47□□□□□ -0.25
CUX2-201ENST00000261726 C17orf113A0A1B0GUU1 675 aa13.46□□□□□ -0.25
CUX2-201ENST00000261726 F2P00734 622 aa13.46□□□□□ -0.25
CUX2-201ENST00000261726 NIPAL3Q6P499 406 aa13.46□□□□□ -0.25
CUX2-201ENST00000261726 MFSD6LQ8IWD5 586 aa13.46□□□□□ -0.25
CUX2-201ENST00000261726 MINDY1Q8N5J2 469 aa13.46□□□□□ -0.25
CUX2-201ENST00000261726 CLEC1AQ8NC01 280 aa13.46□□□□□ -0.25
CUX2-201ENST00000261726 NT5C3BQ969T7 300 aa13.46□□□□□ -0.25
CUX2-201ENST00000261726 HSD3B7Q9H2F3 369 aa13.46□□□□□ -0.25
CUX2-201ENST00000261726 CUTCQ9NTM9 273 aa13.46□□□□□ -0.25
CUX2-201ENST00000261726 DNAJB5O75953 348 aa13.46□□□□□ -0.25
CUX2-201ENST00000261726 FUT1P19526 365 aa13.46□□□□□ -0.25
CUX2-201ENST00000261726 TAS2R31P59538 309 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms