RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 POLR2JP52435 117 aaKnown RBP15.34■□□□□ 0.05
SDCBP-201ENST00000260130 PSMD4P55036 377 aaKnown RBP15.34■□□□□ 0.05
SDCBP-201ENST00000260130 SNTA1Q13424 505 aa15.34■□□□□ 0.05
SDCBP-201ENST00000260130 DUSP5Q16690 384 aa15.34■□□□□ 0.05
SDCBP-201ENST00000260130 HYAL4Q2M3T9 481 aa15.34■□□□□ 0.05
SDCBP-201ENST00000260130 COQ5Q5HYK3 327 aa15.34■□□□□ 0.05
SDCBP-201ENST00000260130 NHSL2Q5HYW2 709 aa15.34■□□□□ 0.05
SDCBP-201ENST00000260130 EXOSC6Q5RKV6 272 aaKnown RBP15.34■□□□□ 0.05
SDCBP-201ENST00000260130 GFRALQ6UXV0 394 aa15.34■□□□□ 0.05
SDCBP-201ENST00000260130 RETREG3Q86VR2 466 aa15.34■□□□□ 0.05
SDCBP-201ENST00000260130 SLC22A16Q86VW1 577 aa15.34■□□□□ 0.05
SDCBP-201ENST00000260130 ERI1Q8IV48 349 aaKnown RBP15.34■□□□□ 0.05
SDCBP-201ENST00000260130 ZFP64Q9NPA5 681 aa15.34■□□□□ 0.05
SDCBP-201ENST00000260130 BOKQ9UMX3 212 aaPredicted RBP15.34■□□□□ 0.05
SDCBP-201ENST00000260130 FAF1Q9UNN5 650 aaPredicted RBP15.34■□□□□ 0.05
SDCBP-201ENST00000260130 MYO18BQ8IUG5 2567 aa15.34■□□□□ 0.05
SDCBP-201ENST00000260130 DHRS12A0PJE2 317 aa15.34■□□□□ 0.05
SDCBP-201ENST00000260130 FAM166BA8MTA8 275 aa15.34■□□□□ 0.05
SDCBP-201ENST00000260130 NME4O00746 187 aa15.34■□□□□ 0.05
SDCBP-201ENST00000260130 TRIM3O75382 744 aaPredicted RBP15.34■□□□□ 0.05
SDCBP-201ENST00000260130 IL33O95760 270 aa15.34■□□□□ 0.05
SDCBP-201ENST00000260130 ZFP36L2P47974 494 aaKnown RBP15.34■□□□□ 0.05
SDCBP-201ENST00000260130 HPCAP84074 193 aa15.34■□□□□ 0.05
SDCBP-201ENST00000260130 EIF2S3LQ2VIR3 472 aaKnown RBP15.34■□□□□ 0.05
SDCBP-201ENST00000260130 LCN8Q6JVE9 175 aa15.34■□□□□ 0.05
SDCBP-201ENST00000260130 SLC30A6Q6NXT4 461 aa15.34■□□□□ 0.05
SDCBP-201ENST00000260130 CDC73Q6P1J9 531 aa15.34■□□□□ 0.05
SDCBP-201ENST00000260130 C6orf120Q7Z4R8 191 aa15.34■□□□□ 0.05
SDCBP-201ENST00000260130 OR52N2Q8NGI0 321 aa15.34■□□□□ 0.05
SDCBP-201ENST00000260130 GOT1L1Q8NHS2 421 aaPredicted RBP15.34■□□□□ 0.05
SDCBP-201ENST00000260130 TFAP2CQ92754 450 aa15.34■□□□□ 0.05
SDCBP-201ENST00000260130 NTNG2Q96CW9 530 aa15.34■□□□□ 0.05
SDCBP-201ENST00000260130 JSRP1Q96MG2 331 aaPredicted RBP15.34■□□□□ 0.05
SDCBP-201ENST00000260130 STACQ99469 402 aa15.34■□□□□ 0.05
SDCBP-201ENST00000260130 DUSP22Q9NRW4 184 aa15.34■□□□□ 0.05
SDCBP-201ENST00000260130 GIN1Q9NXP7 522 aa15.34■□□□□ 0.05
SDCBP-201ENST00000260130 ACTR3BQ9P1U1 418 aa15.34■□□□□ 0.05
SDCBP-201ENST00000260130 RNF103-CHMP3A0A140T963 221 aa15.33■□□□□ 0.04
SDCBP-201ENST00000260130 FAM234BA2RU67 622 aa15.33■□□□□ 0.04
SDCBP-201ENST00000260130 SOCS2O14508 198 aa15.33■□□□□ 0.04
SDCBP-201ENST00000260130 ICOSLGO75144 302 aa15.33■□□□□ 0.04
SDCBP-201ENST00000260130 UQCRC2P22695 453 aa15.33■□□□□ 0.04
SDCBP-201ENST00000260130 RFX3P48380 749 aa15.33■□□□□ 0.04
SDCBP-201ENST00000260130 KCTD21Q4G0X4 260 aa15.33■□□□□ 0.04
SDCBP-201ENST00000260130 CLEC4FQ8N1N0 589 aa15.33■□□□□ 0.04
SDCBP-201ENST00000260130 TMEM251Q8N6I4 163 aa15.33■□□□□ 0.04
SDCBP-201ENST00000260130 TNIP2Q8NFZ5 429 aa15.33■□□□□ 0.04
SDCBP-201ENST00000260130 ADAMTS15Q8TE58 950 aa15.33■□□□□ 0.04
SDCBP-201ENST00000260130 TSPEARQ8WU66 669 aa15.33■□□□□ 0.04
SDCBP-201ENST00000260130 PANX1Q96RD7 426 aa15.33■□□□□ 0.04
SDCBP-201ENST00000260130 MUC13Q9H3R2 512 aa15.33■□□□□ 0.04
SDCBP-201ENST00000260130 PIGUQ9H490 435 aa15.33■□□□□ 0.04
SDCBP-201ENST00000260130 KLRF1Q9NZS2 232 aa15.33■□□□□ 0.04
SDCBP-201ENST00000260130 AURKCQ9UQB9 309 aa15.33■□□□□ 0.04
SDCBP-201ENST00000260130 TENM4Q6N022 2769 aa15.33■□□□□ 0.04
SDCBP-201ENST00000260130 PRAMEF25A6NGN4 478 aa15.32■□□□□ 0.04
SDCBP-201ENST00000260130 SOX30O94993 753 aa15.32■□□□□ 0.04
SDCBP-201ENST00000260130 FCGR1AP12314 374 aa15.32■□□□□ 0.04
SDCBP-201ENST00000260130 CYP4B1P13584 511 aa15.32■□□□□ 0.04
SDCBP-201ENST00000260130 FASP25445 335 aa15.32■□□□□ 0.04
SDCBP-201ENST00000260130 PCSK6P29122 969 aa15.32■□□□□ 0.04
SDCBP-201ENST00000260130 PTGDSP41222 190 aa15.32■□□□□ 0.04
SDCBP-201ENST00000260130 KCNK10P57789 538 aa15.32■□□□□ 0.04
SDCBP-201ENST00000260130 SLC15A3Q8IY34 581 aa15.32■□□□□ 0.04
SDCBP-201ENST00000260130 COX18Q8N8Q8 333 aa15.32■□□□□ 0.04
SDCBP-201ENST00000260130 PRR7Q8TB68 274 aa15.32■□□□□ 0.04
SDCBP-201ENST00000260130 FAM110BQ8TC76 370 aa15.32■□□□□ 0.04
SDCBP-201ENST00000260130 LZICQ8WZA0 190 aa15.32■□□□□ 0.04
SDCBP-201ENST00000260130 OTUB1Q96FW1 271 aaPredicted RBP15.32■□□□□ 0.04
SDCBP-201ENST00000260130 C9orf16Q9BUW7 83 aa15.32■□□□□ 0.04
SDCBP-201ENST00000260130 DEFB127Q9H1M4 99 aa15.32■□□□□ 0.04
SDCBP-201ENST00000260130 A0A087WXM4 84 aa15.32■□□□□ 0.04
SDCBP-201ENST00000260130 LRRC3CA6NJW4 275 aa15.32■□□□□ 0.04
SDCBP-201ENST00000260130 MASP1P48740 699 aa15.32■□□□□ 0.04
SDCBP-201ENST00000260130 ESRRGP62508 458 aa15.32■□□□□ 0.04
SDCBP-201ENST00000260130 DCTN2Q13561 401 aaKnown RBP15.32■□□□□ 0.04
SDCBP-201ENST00000260130 GHDCQ8N2G8 530 aa15.32■□□□□ 0.04
SDCBP-201ENST00000260130 FAM109AQ8N4B1 249 aa15.32■□□□□ 0.04
SDCBP-201ENST00000260130 LRRC58Q96CX6 371 aa15.32■□□□□ 0.04
SDCBP-201ENST00000260130 TMEM41AQ96HV5 264 aa15.32■□□□□ 0.04
SDCBP-201ENST00000260130 INPP5KQ9BT40 448 aa15.32■□□□□ 0.04
SDCBP-201ENST00000260130 BTBD2Q9BX70 525 aa15.32■□□□□ 0.04
SDCBP-201ENST00000260130 ZDHHC11Q9H8X9 412 aa15.32■□□□□ 0.04
SDCBP-201ENST00000260130 CCDC154A6NI56 674 aa15.31■□□□□ 0.04
SDCBP-201ENST00000260130 SAC3D1A6NKF1 404 aa15.31■□□□□ 0.04
SDCBP-201ENST00000260130 KCNK2O95069 426 aa15.31■□□□□ 0.04
SDCBP-201ENST00000260130 IGKV1D-16P01601 117 aa15.31■□□□□ 0.04
SDCBP-201ENST00000260130 GPIP06744 558 aa15.31■□□□□ 0.04
SDCBP-201ENST00000260130 RFPL3SP0C7P2 107 aa15.31■□□□□ 0.04
SDCBP-201ENST00000260130 CAPN3P20807 821 aa15.31■□□□□ 0.04
SDCBP-201ENST00000260130 MATN1P21941 496 aa15.31■□□□□ 0.04
SDCBP-201ENST00000260130 MYF6P23409 242 aa15.31■□□□□ 0.04
SDCBP-201ENST00000260130 MAGEA5P43359 124 aa15.31■□□□□ 0.04
SDCBP-201ENST00000260130 MAN2A2P49641 1150 aa15.31■□□□□ 0.04
SDCBP-201ENST00000260130 FNDC7Q5VTL7 733 aa15.31■□□□□ 0.04
SDCBP-201ENST00000260130 MSANTD1Q6ZTZ1 278 aa15.31■□□□□ 0.04
SDCBP-201ENST00000260130 SPPL2CQ8IUH8 684 aa15.31■□□□□ 0.04
SDCBP-201ENST00000260130 RNF138Q8WVD3 245 aa15.31■□□□□ 0.04
SDCBP-201ENST00000260130 CDS1Q92903 461 aa15.31■□□□□ 0.04
SDCBP-201ENST00000260130 CENPNQ96H22 339 aaPredicted RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms