RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 SLC5A8Q8N695 610 aa16.1■□□□□ 0.17
SRSF1-201ENST00000258962 ATG16L2Q8NAA4 619 aa16.1■□□□□ 0.17
SRSF1-201ENST00000258962 PIK3C3Q8NEB9 887 aa16.1■□□□□ 0.17
SRSF1-201ENST00000258962 EXTL1Q92935 676 aa16.1■□□□□ 0.17
SRSF1-201ENST00000258962 ALPK1Q96QP1 1244 aa16.1■□□□□ 0.17
SRSF1-201ENST00000258962 PSD2Q9BQI7 771 aa16.1■□□□□ 0.17
SRSF1-201ENST00000258962 FUZQ9BT04 418 aa16.1■□□□□ 0.17
SRSF1-201ENST00000258962 NUDT9Q9BW91 350 aa16.1■□□□□ 0.17
SRSF1-201ENST00000258962 OR8D2Q9GZM6 311 aa16.1■□□□□ 0.17
SRSF1-201ENST00000258962 PNPLA3Q9NST1 481 aa16.1■□□□□ 0.17
SRSF1-201ENST00000258962 KIF17Q9P2E2 1029 aa16.1■□□□□ 0.17
SRSF1-201ENST00000258962 PRODH2Q9UF12 536 aa16.1■□□□□ 0.17
SRSF1-201ENST00000258962 POLHQ9Y253 713 aa16.1■□□□□ 0.17
SRSF1-201ENST00000258962 UGT2B17O75795 530 aa16.09■□□□□ 0.17
SRSF1-201ENST00000258962 H1F0P07305 194 aaKnown RBP16.09■□□□□ 0.17
SRSF1-201ENST00000258962 ITGAMP11215 1152 aa16.09■□□□□ 0.17
SRSF1-201ENST00000258962 IL7RP16871 459 aa16.09■□□□□ 0.17
SRSF1-201ENST00000258962 ELAVL4P26378 380 aaKnown RBP16.09■□□□□ 0.17
SRSF1-201ENST00000258962 POLR2IP36954 125 aaKnown RBP16.09■□□□□ 0.17
SRSF1-201ENST00000258962 PLAURQ03405 335 aa16.09■□□□□ 0.17
SRSF1-201ENST00000258962 PIN1Q13526 163 aaPredicted RBP16.09■□□□□ 0.17
SRSF1-201ENST00000258962 LARS2Q15031 903 aaKnown RBP16.09■□□□□ 0.17
SRSF1-201ENST00000258962 LIN52Q52LA3 116 aa16.09■□□□□ 0.17
SRSF1-201ENST00000258962 ATP1A1-AS1Q5TC04 95 aa16.09■□□□□ 0.17
SRSF1-201ENST00000258962 TTC23Q5W5X9 447 aa16.09■□□□□ 0.17
SRSF1-201ENST00000258962 OR9Q2Q8NGE9 314 aa16.09■□□□□ 0.17
SRSF1-201ENST00000258962 OR14A16Q8NHC5 309 aa16.09■□□□□ 0.17
SRSF1-201ENST00000258962 TTC9Q92623 222 aa16.09■□□□□ 0.17
SRSF1-201ENST00000258962 PMM1Q92871 262 aa16.09■□□□□ 0.17
SRSF1-201ENST00000258962 FKBP10Q96AY3 582 aa16.09■□□□□ 0.17
SRSF1-201ENST00000258962 WBP1Q96G27 269 aa16.09■□□□□ 0.17
SRSF1-201ENST00000258962 PRRC1Q96M27 445 aa16.09■□□□□ 0.17
SRSF1-201ENST00000258962 FEVQ99581 238 aa16.09■□□□□ 0.17
SRSF1-201ENST00000258962 PRR14Q9BWN1 585 aa16.09■□□□□ 0.17
SRSF1-201ENST00000258962 Q9N2J8 555 aa16.09■□□□□ 0.17
SRSF1-201ENST00000258962 MAN2C1Q9NTJ4 1040 aa16.09■□□□□ 0.17
SRSF1-201ENST00000258962 SLC13A4Q9UKG4 626 aa16.09■□□□□ 0.17
SRSF1-201ENST00000258962 RALYQ9UKM9 306 aaKnown RBP16.09■□□□□ 0.17
SRSF1-201ENST00000258962 ZNF232Q9UNY5 417 aa16.09■□□□□ 0.17
SRSF1-201ENST00000258962 PTRH2Q9Y3E5 179 aaKnown RBP16.09■□□□□ 0.17
SRSF1-201ENST00000258962 ITPR1Q14643 2758 aa16.09■□□□□ 0.17
SRSF1-201ENST00000258962 CFAP47Q6ZTR5 3102 aa16.09■□□□□ 0.17
SRSF1-201ENST00000258962 CHD6Q8TD26 2715 aa16.09■□□□□ 0.17
SRSF1-201ENST00000258962 TTC36A6NLP5 189 aa16.09■□□□□ 0.17
SRSF1-201ENST00000258962 DYRK3O43781 588 aa16.09■□□□□ 0.17
SRSF1-201ENST00000258962 PRKNO60260 465 aaPredicted RBP16.09■□□□□ 0.17
SRSF1-201ENST00000258962 NID1P14543 1247 aa16.09■□□□□ 0.17
SRSF1-201ENST00000258962 CDH2P19022 906 aaPredicted RBP16.09■□□□□ 0.17
SRSF1-201ENST00000258962 FOLR3P41439 243 aa16.09■□□□□ 0.17
SRSF1-201ENST00000258962 RFX3P48380 749 aa16.09■□□□□ 0.17
SRSF1-201ENST00000258962 SEC23BQ15437 767 aa16.09■□□□□ 0.17
SRSF1-201ENST00000258962 FLYWCH1Q4VC44 716 aa16.09■□□□□ 0.17
SRSF1-201ENST00000258962 EIPR1Q53HC9 387 aa16.09■□□□□ 0.17
SRSF1-201ENST00000258962 RNF220Q5VTB9 566 aa16.09■□□□□ 0.17
SRSF1-201ENST00000258962 FAAH2Q6GMR7 532 aa16.09■□□□□ 0.17
SRSF1-201ENST00000258962 ZNF770Q6IQ21 691 aaPredicted RBP16.09■□□□□ 0.17
SRSF1-201ENST00000258962 BCORP1Q8N888 145 aa16.09■□□□□ 0.17
SRSF1-201ENST00000258962 ZNF555Q8NEP9 628 aa16.09■□□□□ 0.17
SRSF1-201ENST00000258962 THAP4Q8WY91 577 aa16.09■□□□□ 0.17
SRSF1-201ENST00000258962 SPSB2Q99619 263 aa16.09■□□□□ 0.17
SRSF1-201ENST00000258962 MESP1Q9BRJ9 268 aa16.09■□□□□ 0.17
SRSF1-201ENST00000258962 YTHDF1Q9BYJ9 559 aaKnown RBP16.09■□□□□ 0.17
SRSF1-201ENST00000258962 SLC26A1Q9H2B4 701 aa16.09■□□□□ 0.17
SRSF1-201ENST00000258962 ZNF696Q9H7X3 374 aa16.09■□□□□ 0.17
SRSF1-201ENST00000258962 CACYBPQ9HB71 228 aaKnown RBP16.09■□□□□ 0.17
SRSF1-201ENST00000258962 KRT84Q9NSB2 600 aa16.09■□□□□ 0.17
SRSF1-201ENST00000258962 KLHL28Q9NXS3 571 aa16.09■□□□□ 0.17
SRSF1-201ENST00000258962 ARRDC5A6NEK1 342 aa16.08■□□□□ 0.16
SRSF1-201ENST00000258962 A6NHS1 94 aa16.08■□□□□ 0.16
SRSF1-201ENST00000258962 IDSB3KWA1 339 aa16.08■□□□□ 0.16
SRSF1-201ENST00000258962 NPIPB9F8W1W9 429 aa16.08■□□□□ 0.16
SRSF1-201ENST00000258962 ATXN7O15265 892 aaPredicted RBP16.08■□□□□ 0.16
SRSF1-201ENST00000258962 BCAS1O75363 584 aaPredicted RBP16.08■□□□□ 0.16
SRSF1-201ENST00000258962 CCNB2O95067 398 aa16.08■□□□□ 0.16
SRSF1-201ENST00000258962 CBLP22681 906 aa16.08■□□□□ 0.16
SRSF1-201ENST00000258962 RNF144AP50876 292 aaPredicted RBP16.08■□□□□ 0.16
SRSF1-201ENST00000258962 RPS6KA3P51812 740 aa16.08■□□□□ 0.16
SRSF1-201ENST00000258962 ZNF136P52737 540 aa16.08■□□□□ 0.16
SRSF1-201ENST00000258962 RGS8P57771 180 aaPredicted RBP16.08■□□□□ 0.16
SRSF1-201ENST00000258962 IL1RL1Q01638 556 aa16.08■□□□□ 0.16
SRSF1-201ENST00000258962 FOXD4Q12950 439 aaPredicted RBP16.08■□□□□ 0.16
SRSF1-201ENST00000258962 FGD3Q5JSP0 725 aa16.08■□□□□ 0.16
SRSF1-201ENST00000258962 MRPL2Q5T653 305 aaKnown RBP16.08■□□□□ 0.16
SRSF1-201ENST00000258962 MRPL14Q6P1L8 145 aaKnown RBP16.08■□□□□ 0.16
SRSF1-201ENST00000258962 ANKRD37Q7Z713 158 aa16.08■□□□□ 0.16
SRSF1-201ENST00000258962 TAGAPQ8N103 731 aa16.08■□□□□ 0.16
SRSF1-201ENST00000258962 LSM14AQ8ND56 463 aaKnown RBP16.08■□□□□ 0.16
SRSF1-201ENST00000258962 OR2Y1Q8NGV0 311 aa16.08■□□□□ 0.16
SRSF1-201ENST00000258962 DAZLQ92904 295 aaKnown RBP16.08■□□□□ 0.16
SRSF1-201ENST00000258962 MUS81Q96NY9 551 aa16.08■□□□□ 0.16
SRSF1-201ENST00000258962 LMF1Q96S06 567 aa16.08■□□□□ 0.16
SRSF1-201ENST00000258962 RIBC2Q9H4K1 309 aa16.08■□□□□ 0.16
SRSF1-201ENST00000258962 CTPS2Q9NRF8 586 aa16.08■□□□□ 0.16
SRSF1-201ENST00000258962 NXT1Q9UKK6 140 aaKnown RBP16.08■□□□□ 0.16
SRSF1-201ENST00000258962 CBLCQ9ULV8 474 aa16.08■□□□□ 0.16
SRSF1-201ENST00000258962 PCDHGA10Q9Y5H3 936 aa16.08■□□□□ 0.16
SRSF1-201ENST00000258962 MGAQ8IWI9 3026 aa16.08■□□□□ 0.16
SRSF1-201ENST00000258962 IGHV3-20A0A0C4DH32 117 aa16.07■□□□□ 0.16
SRSF1-201ENST00000258962 A0A1W2PRQ8 180 aa16.07■□□□□ 0.16
SRSF1-201ENST00000258962 CDHR4A6H8M9 788 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms