RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 FLVCR1-AS1Q8TAF5 88 aa13.63□□□□□ -0.23
TRAFD1-201ENST00000257604 BBS10Q8TAM1 723 aa13.63□□□□□ -0.23
TRAFD1-201ENST00000257604 SMAP2Q8WU79 429 aaPredicted RBP13.63□□□□□ -0.23
TRAFD1-201ENST00000257604 RASSF5Q8WWW0 418 aa13.63□□□□□ -0.23
TRAFD1-201ENST00000257604 SCARF2Q96GP6 870 aaPredicted RBP13.63□□□□□ -0.23
TRAFD1-201ENST00000257604 GFM1Q96RP9 751 aaKnown RBP13.63□□□□□ -0.23
TRAFD1-201ENST00000257604 TSSK6Q9BXA6 273 aa13.63□□□□□ -0.23
TRAFD1-201ENST00000257604 ATP13A2Q9NQ11 1180 aa13.63□□□□□ -0.23
TRAFD1-201ENST00000257604 YARS2Q9Y2Z4 477 aaKnown RBP13.63□□□□□ -0.23
TRAFD1-201ENST00000257604 CDC14CA4D256 554 aa13.62□□□□□ -0.23
TRAFD1-201ENST00000257604 OR5K3A6NET4 321 aa13.62□□□□□ -0.23
TRAFD1-201ENST00000257604 LGI1O95970 557 aa13.62□□□□□ -0.23
TRAFD1-201ENST00000257604 ACP2P11117 423 aa13.62□□□□□ -0.23
TRAFD1-201ENST00000257604 CD38P28907 300 aa13.62□□□□□ -0.23
TRAFD1-201ENST00000257604 FRKP42685 505 aaPredicted RBP13.62□□□□□ -0.23
TRAFD1-201ENST00000257604 GSTM5P46439 218 aa13.62□□□□□ -0.23
TRAFD1-201ENST00000257604 CAMK2BQ13554 666 aa13.62□□□□□ -0.23
TRAFD1-201ENST00000257604 C1orf189Q5VU69 101 aa13.62□□□□□ -0.23
TRAFD1-201ENST00000257604 TMEM64Q6YI46 380 aa13.62□□□□□ -0.23
TRAFD1-201ENST00000257604 TRMT61AQ96FX7 289 aaKnown RBP13.62□□□□□ -0.23
TRAFD1-201ENST00000257604 ST6GAL2Q96JF0 529 aa13.62□□□□□ -0.23
TRAFD1-201ENST00000257604 PHF7Q9BWX1 381 aaPredicted RBP13.62□□□□□ -0.23
TRAFD1-201ENST00000257604 DPH1Q9BZG8 443 aa13.62□□□□□ -0.23
TRAFD1-201ENST00000257604 OR2B2Q9GZK3 357 aa13.62□□□□□ -0.23
TRAFD1-201ENST00000257604 OR10H1Q9Y4A9 318 aa13.62□□□□□ -0.23
TRAFD1-201ENST00000257604 PCDH15Q96QU1 1955 aa13.62□□□□□ -0.23
TRAFD1-201ENST00000257604 PRR19A6NJB7 356 aa13.62□□□□□ -0.23
TRAFD1-201ENST00000257604 FAAHO00519 579 aa13.62□□□□□ -0.23
TRAFD1-201ENST00000257604 TNFRSF10CO14798 259 aa13.62□□□□□ -0.23
TRAFD1-201ENST00000257604 SAGP10523 405 aaPredicted RBP13.62□□□□□ -0.23
TRAFD1-201ENST00000257604 RFX2P48378 723 aa13.62□□□□□ -0.23
TRAFD1-201ENST00000257604 RPS7P62081 194 aaKnown RBP13.62□□□□□ -0.23
TRAFD1-201ENST00000257604 KLHL12Q53G59 568 aa13.62□□□□□ -0.23
TRAFD1-201ENST00000257604 TTLL10Q6ZVT0 673 aa13.62□□□□□ -0.23
TRAFD1-201ENST00000257604 NATD1Q8N6N6 113 aa13.62□□□□□ -0.23
TRAFD1-201ENST00000257604 TEX47Q8TBZ9 253 aa13.62□□□□□ -0.23
TRAFD1-201ENST00000257604 GPBAR1Q8TDU6 330 aa13.62□□□□□ -0.23
TRAFD1-201ENST00000257604 C10orf90Q96M02 699 aa13.62□□□□□ -0.23
TRAFD1-201ENST00000257604 ASPNQ9BXN1 380 aa13.62□□□□□ -0.23
TRAFD1-201ENST00000257604 IRF2BPLQ9H1B7 796 aa13.62□□□□□ -0.23
TRAFD1-201ENST00000257604 MED20Q9H944 212 aa13.62□□□□□ -0.23
TRAFD1-201ENST00000257604 FREM2Q5SZK8 3169 aa13.62□□□□□ -0.23
TRAFD1-201ENST00000257604 A0A0G2JPF8 293 aa13.61□□□□□ -0.23
TRAFD1-201ENST00000257604 ZC3H12DA2A288 527 aaKnown RBP13.61□□□□□ -0.23
TRAFD1-201ENST00000257604 HNRNPCL2B2RXH8 293 aa13.61□□□□□ -0.23
TRAFD1-201ENST00000257604 HNRNPCL3B7ZW38 293 aa13.61□□□□□ -0.23
TRAFD1-201ENST00000257604 RGS13O14921 159 aa13.61□□□□□ -0.23
TRAFD1-201ENST00000257604 HNRNPCL4P0DMR1 293 aa13.61□□□□□ -0.23
TRAFD1-201ENST00000257604 OR2G6Q5TZ20 316 aa13.61□□□□□ -0.23
TRAFD1-201ENST00000257604 LIPKQ5VXJ0 399 aa13.61□□□□□ -0.23
TRAFD1-201ENST00000257604 PTCRAQ6ISU1 281 aaPredicted RBP13.61□□□□□ -0.23
TRAFD1-201ENST00000257604 CCDC190Q86UF4 302 aa13.61□□□□□ -0.23
TRAFD1-201ENST00000257604 MS4A4EQ96PG1 132 aa13.61□□□□□ -0.23
TRAFD1-201ENST00000257604 BARHL1Q9BZE3 327 aa13.61□□□□□ -0.23
TRAFD1-201ENST00000257604 PNO1Q9NRX1 252 aaKnown RBP13.61□□□□□ -0.23
TRAFD1-201ENST00000257604 POT1Q9NUX5 634 aa13.61□□□□□ -0.23
TRAFD1-201ENST00000257604 SLC22A7Q9Y694 548 aa13.61□□□□□ -0.23
TRAFD1-201ENST00000257604 CLCA3PQ9Y6N3 262 aa13.61□□□□□ -0.23
TRAFD1-201ENST00000257604 IGHV1OR15-9A0A0B4J2B8 117 aa13.61□□□□□ -0.23
TRAFD1-201ENST00000257604 A0A1W2PQ09 198 aa13.61□□□□□ -0.23
TRAFD1-201ENST00000257604 BLKP51451 505 aa13.61□□□□□ -0.23
TRAFD1-201ENST00000257604 CSTF1Q05048 431 aaKnown RBP13.61□□□□□ -0.23
TRAFD1-201ENST00000257604 LARS2Q15031 903 aaKnown RBP13.61□□□□□ -0.23
TRAFD1-201ENST00000257604 SSX1Q16384 188 aa13.61□□□□□ -0.23
TRAFD1-201ENST00000257604 GXYLT1Q4G148 440 aa13.61□□□□□ -0.23
TRAFD1-201ENST00000257604 MRPL2Q5T653 305 aaKnown RBP13.61□□□□□ -0.23
TRAFD1-201ENST00000257604 SLC30A8Q8IWU4 369 aa13.61□□□□□ -0.23
TRAFD1-201ENST00000257604 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.61□□□□□ -0.23
TRAFD1-201ENST00000257604 NXF2Q9GZY0 626 aaKnown RBP13.61□□□□□ -0.23
TRAFD1-201ENST00000257604 MAN2C1Q9NTJ4 1040 aa13.61□□□□□ -0.23
TRAFD1-201ENST00000257604 MGAT4BQ9UQ53 548 aa13.61□□□□□ -0.23
TRAFD1-201ENST00000257604 FAM172BPA6NC97 362 aa13.61□□□□□ -0.23
TRAFD1-201ENST00000257604 RHPN2P1A8MT19 583 aa13.61□□□□□ -0.23
TRAFD1-201ENST00000257604 ADAP00813 363 aa13.61□□□□□ -0.23
TRAFD1-201ENST00000257604 PROS1P07225 676 aa13.61□□□□□ -0.23
TRAFD1-201ENST00000257604 MLLT3P42568 568 aaPredicted RBP13.61□□□□□ -0.23
TRAFD1-201ENST00000257604 SLC9A3P48764 834 aa13.61□□□□□ -0.23
TRAFD1-201ENST00000257604 GNA13Q14344 377 aa13.61□□□□□ -0.23
TRAFD1-201ENST00000257604 FRRS1Q6ZNA5 592 aa13.61□□□□□ -0.23
TRAFD1-201ENST00000257604 RAB43Q86YS6 212 aa13.61□□□□□ -0.23
TRAFD1-201ENST00000257604 PRR22Q8IZ63 422 aa13.61□□□□□ -0.23
TRAFD1-201ENST00000257604 SPACA7Q96KW9 195 aa13.61□□□□□ -0.23
TRAFD1-201ENST00000257604 POLR2J2Q9GZM3 115 aaKnown RBP13.61□□□□□ -0.23
TRAFD1-201ENST00000257604 SPRTNQ9H040 489 aaPredicted RBP13.61□□□□□ -0.23
TRAFD1-201ENST00000257604 CCDC59Q9P031 241 aaKnown RBP13.61□□□□□ -0.23
TRAFD1-201ENST00000257604 FTSJ1Q9UET6 329 aa13.61□□□□□ -0.23
TRAFD1-201ENST00000257604 HS3ST3A1Q9Y663 406 aa13.61□□□□□ -0.23
TRAFD1-201ENST00000257604 MEIOCA2RUB1 952 aa13.6□□□□□ -0.23
TRAFD1-201ENST00000257604 SRFP11831 508 aa13.6□□□□□ -0.23
TRAFD1-201ENST00000257604 PRKCAP17252 672 aa13.6□□□□□ -0.23
TRAFD1-201ENST00000257604 PI4KAP42356 2102 aa13.6□□□□□ -0.23
TRAFD1-201ENST00000257604 GIPRP48546 466 aa13.6□□□□□ -0.23
TRAFD1-201ENST00000257604 DCST2Q5T1A1 773 aa13.6□□□□□ -0.23
TRAFD1-201ENST00000257604 ZNF770Q6IQ21 691 aaPredicted RBP13.6□□□□□ -0.23
TRAFD1-201ENST00000257604 FAM131AQ6UXB0 335 aa13.6□□□□□ -0.23
TRAFD1-201ENST00000257604 OR9Q1Q8NGQ5 310 aa13.6□□□□□ -0.23
TRAFD1-201ENST00000257604 PFN4Q8NHR9 129 aa13.6□□□□□ -0.23
TRAFD1-201ENST00000257604 APOBEC4Q8WW27 367 aaKnown RBP13.6□□□□□ -0.23
TRAFD1-201ENST00000257604 GAL3ST4Q96RP7 486 aa13.6□□□□□ -0.23
TRAFD1-201ENST00000257604 LMF1Q96S06 567 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms