RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 CHAF1BQ13112 559 aa12.56□□□□□ -0.4
PRPF38A-201ENST00000257181 MAD2L1BPQ15013 274 aaPredicted RBP12.56□□□□□ -0.4
PRPF38A-201ENST00000257181 TBC1D28Q2M2D7 210 aa12.56□□□□□ -0.4
PRPF38A-201ENST00000257181 PGBD5Q8N414 524 aa12.56□□□□□ -0.4
PRPF38A-201ENST00000257181 TRUB1Q8WWH5 349 aaKnown RBP12.56□□□□□ -0.4
PRPF38A-201ENST00000257181 PRRC1Q96M27 445 aa12.56□□□□□ -0.4
PRPF38A-201ENST00000257181 ZNF226Q9NYT6 803 aa12.56□□□□□ -0.4
PRPF38A-201ENST00000257181 SERINC4A6NH21 518 aa12.56□□□□□ -0.4
PRPF38A-201ENST00000257181 PIAS1O75925 651 aa12.56□□□□□ -0.4
PRPF38A-201ENST00000257181 HPP00738 406 aa12.56□□□□□ -0.4
PRPF38A-201ENST00000257181 SLC1A3P43003 542 aa12.56□□□□□ -0.4
PRPF38A-201ENST00000257181 PPP2CBP62714 309 aa12.56□□□□□ -0.4
PRPF38A-201ENST00000257181 PPP2CAP67775 309 aa12.56□□□□□ -0.4
PRPF38A-201ENST00000257181 ELF3P78545 371 aaPredicted RBP12.56□□□□□ -0.4
PRPF38A-201ENST00000257181 RGNQ15493 299 aa12.56□□□□□ -0.4
PRPF38A-201ENST00000257181 ABHD17CQ6PCB6 329 aa12.56□□□□□ -0.4
PRPF38A-201ENST00000257181 PIANPQ8IYJ0 282 aa12.56□□□□□ -0.4
PRPF38A-201ENST00000257181 DTX3Q8N9I9 347 aa12.56□□□□□ -0.4
PRPF38A-201ENST00000257181 FOXRED1Q96CU9 486 aaPredicted RBP12.56□□□□□ -0.4
PRPF38A-201ENST00000257181 SLC30A3Q99726 388 aa12.56□□□□□ -0.4
PRPF38A-201ENST00000257181 NUDT9Q9BW91 350 aa12.56□□□□□ -0.4
PRPF38A-201ENST00000257181 NDRG4Q9ULP0 352 aaKnown RBP12.56□□□□□ -0.4
PRPF38A-201ENST00000257181 PPIAP62937 165 aaKnown RBP12.56□□□□□ -0.4
PRPF38A-201ENST00000257181 RELAQ04206 551 aa12.56□□□□□ -0.4
PRPF38A-201ENST00000257181 OLIG2Q13516 323 aa12.56□□□□□ -0.4
PRPF38A-201ENST00000257181 DDI2Q5TDH0 399 aa12.56□□□□□ -0.4
PRPF38A-201ENST00000257181 ABI3BPQ7Z7G0 1075 aa12.56□□□□□ -0.4
PRPF38A-201ENST00000257181 MYOTQ9UBF9 498 aa12.56□□□□□ -0.4
PRPF38A-201ENST00000257181 SH3D21A4FU49 640 aa12.56□□□□□ -0.4
PRPF38A-201ENST00000257181 CCDC182A6NF36 153 aa12.56□□□□□ -0.4
PRPF38A-201ENST00000257181 MECP2P51608 486 aaKnown RBP12.56□□□□□ -0.4
PRPF38A-201ENST00000257181 SELENBP1Q13228 472 aa12.56□□□□□ -0.4
PRPF38A-201ENST00000257181 SLC6A19Q695T7 634 aa12.56□□□□□ -0.4
PRPF38A-201ENST00000257181 OR4N5Q8IXE1 308 aa12.56□□□□□ -0.4
PRPF38A-201ENST00000257181 HDAC2Q92769 488 aaKnown RBP12.56□□□□□ -0.4
PRPF38A-201ENST00000257181 HPS1Q92902 700 aa12.56□□□□□ -0.4
PRPF38A-201ENST00000257181 APH1AQ96BI3 265 aa12.56□□□□□ -0.4
PRPF38A-201ENST00000257181 ZNF419Q96HQ0 510 aaPredicted RBP12.56□□□□□ -0.4
PRPF38A-201ENST00000257181 RBM24Q9BX46 236 aaKnown RBP12.56□□□□□ -0.4
PRPF38A-201ENST00000257181 PLA2G2FQ9BZM2 168 aa12.56□□□□□ -0.4
PRPF38A-201ENST00000257181 MKRN2Q9H000 416 aaKnown RBP12.56□□□□□ -0.4
PRPF38A-201ENST00000257181 DECR2Q9NUI1 292 aa12.56□□□□□ -0.4
PRPF38A-201ENST00000257181 MOKQ9UQ07 419 aa12.56□□□□□ -0.4
PRPF38A-201ENST00000257181 DISC1C4P0D8 188 aa12.55□□□□□ -0.4
PRPF38A-201ENST00000257181 CHP2O43745 196 aa12.55□□□□□ -0.4
PRPF38A-201ENST00000257181 DGCR6Q14129 220 aa12.55□□□□□ -0.4
PRPF38A-201ENST00000257181 TNFAIP8L3Q5GJ75 292 aa12.55□□□□□ -0.4
PRPF38A-201ENST00000257181 SLC48A1Q6P1K1 146 aa12.55□□□□□ -0.4
PRPF38A-201ENST00000257181 MS4A15Q8N5U1 240 aa12.55□□□□□ -0.4
PRPF38A-201ENST00000257181 OR9K2Q8NGE7 335 aa12.55□□□□□ -0.4
PRPF38A-201ENST00000257181 FGF11Q92914 225 aa12.55□□□□□ -0.4
PRPF38A-201ENST00000257181 SLC17A6Q9P2U8 582 aa12.55□□□□□ -0.4
PRPF38A-201ENST00000257181 GNG8Q9UK08 70 aa12.55□□□□□ -0.4
PRPF38A-201ENST00000257181 ZNF443Q9Y2A4 671 aaPredicted RBP12.55□□□□□ -0.4
PRPF38A-201ENST00000257181 ENPP4Q9Y6X5 453 aa12.55□□□□□ -0.4
PRPF38A-201ENST00000257181 ALDOBP05062 364 aa12.55□□□□□ -0.4
PRPF38A-201ENST00000257181 CEACAM5P06731 702 aa12.55□□□□□ -0.4
PRPF38A-201ENST00000257181 CD3GP09693 182 aa12.55□□□□□ -0.4
PRPF38A-201ENST00000257181 CHRNB1P11230 501 aa12.55□□□□□ -0.4
PRPF38A-201ENST00000257181 ARR3P36575 388 aa12.55□□□□□ -0.4
PRPF38A-201ENST00000257181 MNX1P50219 401 aaPredicted RBP12.55□□□□□ -0.4
PRPF38A-201ENST00000257181 CARD17Q5XLA6 110 aa12.55□□□□□ -0.4
PRPF38A-201ENST00000257181 GLB1L2Q8IW92 636 aa12.55□□□□□ -0.4
PRPF38A-201ENST00000257181 DNAAF1Q8NEP3 725 aa12.55□□□□□ -0.4
PRPF38A-201ENST00000257181 SECISBP2Q96T21 854 aaKnown RBP12.55□□□□□ -0.4
PRPF38A-201ENST00000257181 SMURF1Q9HCE7 757 aa12.55□□□□□ -0.4
PRPF38A-201ENST00000257181 TBC1D29Q9UFV1 150 aa12.55□□□□□ -0.4
PRPF38A-201ENST00000257181 TCRBV5S1A1TA0A578 114 aa12.55□□□□□ -0.4
PRPF38A-201ENST00000257181 ZNF806P0C7X5 589 aa12.55□□□□□ -0.4
PRPF38A-201ENST00000257181 YAP1P46937 504 aaKnown RBP12.55□□□□□ -0.4
PRPF38A-201ENST00000257181 CTXN1P60606 82 aa12.55□□□□□ -0.4
PRPF38A-201ENST00000257181 NDUFA5Q16718 116 aa12.55□□□□□ -0.4
PRPF38A-201ENST00000257181 Q6ZS52 159 aa12.55□□□□□ -0.4
PRPF38A-201ENST00000257181 KCTD20Q7Z5Y7 419 aa12.55□□□□□ -0.4
PRPF38A-201ENST00000257181 A0A087WV62 115 aa12.55□□□□□ -0.4
PRPF38A-201ENST00000257181 TRBV5-4A0A0C4DH59 114 aa12.55□□□□□ -0.4
PRPF38A-201ENST00000257181 ITM2AO43736 263 aa12.55□□□□□ -0.4
PRPF38A-201ENST00000257181 PGAM2P15259 253 aa12.55□□□□□ -0.4
PRPF38A-201ENST00000257181 BORAQ6PGQ7 559 aa12.55□□□□□ -0.4
PRPF38A-201ENST00000257181 DDA1Q9BW61 102 aa12.55□□□□□ -0.4
PRPF38A-201ENST00000257181 DNTTIP1Q9H147 329 aa12.55□□□□□ -0.4
PRPF38A-201ENST00000257181 P2RY12Q9H244 342 aa12.55□□□□□ -0.4
PRPF38A-201ENST00000257181 ANKRA2Q9H9E1 313 aa12.55□□□□□ -0.4
PRPF38A-201ENST00000257181 PAIP2BQ9ULR5 123 aaKnown RBP12.55□□□□□ -0.4
PRPF38A-201ENST00000257181 A0A0X1KG70 313 aa12.54□□□□□ -0.4
PRPF38A-201ENST00000257181 TYROBPO43914 113 aa12.54□□□□□ -0.4
PRPF38A-201ENST00000257181 DIRAS3O95661 229 aa12.54□□□□□ -0.4
PRPF38A-201ENST00000257181 GNG2P59768 71 aa12.54□□□□□ -0.4
PRPF38A-201ENST00000257181 GAB1Q13480 694 aa12.54□□□□□ -0.4
PRPF38A-201ENST00000257181 SIX1Q15475 284 aaPredicted RBP12.54□□□□□ -0.4
PRPF38A-201ENST00000257181 STK11Q15831 433 aa12.54□□□□□ -0.4
PRPF38A-201ENST00000257181 TSSK4Q6SA08 328 aa12.54□□□□□ -0.4
PRPF38A-201ENST00000257181 IGDCC3Q8IVU1 814 aa12.54□□□□□ -0.4
PRPF38A-201ENST00000257181 OPA3Q9H6K4 179 aa12.54□□□□□ -0.4
PRPF38A-201ENST00000257181 PFDN2Q9UHV9 154 aa12.54□□□□□ -0.4
PRPF38A-201ENST00000257181 TRPM7Q96QT4 1865 aa12.54□□□□□ -0.4
PRPF38A-201ENST00000257181 TRGV8A0A0C4DH27 118 aa12.54□□□□□ -0.4
PRPF38A-201ENST00000257181 EEF1E1-BLOC1S5C9J1V9 151 aa12.54□□□□□ -0.4
PRPF38A-201ENST00000257181 EEF1E1O43324 174 aaKnown RBP12.54□□□□□ -0.4
PRPF38A-201ENST00000257181 EDIL3O43854 480 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms