RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 RNGTTO60942 597 aaKnown RBP9.43□□□□□ -0.9
COPB1-201ENST00000249923 TFPIP10646 304 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 HTR2AP28223 471 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 FGF9P31371 208 aaPredicted RBP9.43□□□□□ -0.9
COPB1-201ENST00000249923 GABRA5P31644 462 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 SLC9A3P48764 834 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 RPE65Q16518 533 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 DUSP6Q16828 381 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 SLC35F1Q5T1Q4 408 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 BCL2L15Q5TBC7 163 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 GET4Q7L5D6 327 aaPredicted RBP9.43□□□□□ -0.9
COPB1-201ENST00000249923 LUZP2Q86TE4 346 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 RDH10Q8IZV5 341 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 CCL4L1Q8NHW4 92 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 HMGB4Q8WW32 186 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 CDS1Q92903 461 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 NARS2Q96I59 477 aaKnown RBP9.43□□□□□ -0.9
COPB1-201ENST00000249923 HINT3Q9NQE9 182 aaKnown RBP9.43□□□□□ -0.9
COPB1-201ENST00000249923 H0YC42 278 aa9.42□□□□□ -0.9
COPB1-201ENST00000249923 IGHA1P01876 353 aa9.42□□□□□ -0.9
COPB1-201ENST00000249923 PRKAR1AP10644 381 aa9.42□□□□□ -0.9
COPB1-201ENST00000249923 DRD5P21918 477 aa9.42□□□□□ -0.9
COPB1-201ENST00000249923 CPN2P22792 545 aa9.42□□□□□ -0.9
COPB1-201ENST00000249923 ZNF81P51508 661 aa9.42□□□□□ -0.9
COPB1-201ENST00000249923 ZNF620Q6ZNG0 422 aa9.42□□□□□ -0.9
COPB1-201ENST00000249923 PEX5LQ8IYB4 626 aa9.42□□□□□ -0.9
COPB1-201ENST00000249923 HDDC3Q8N4P3 179 aa9.42□□□□□ -0.9
COPB1-201ENST00000249923 LRRC17Q8N6Y2 441 aa9.42□□□□□ -0.9
COPB1-201ENST00000249923 KCTD7Q96MP8 289 aa9.42□□□□□ -0.9
COPB1-201ENST00000249923 RPP25Q9BUL9 199 aaKnown RBP9.42□□□□□ -0.9
COPB1-201ENST00000249923 MED28Q9H204 178 aa9.42□□□□□ -0.9
COPB1-201ENST00000249923 MED20Q9H944 212 aa9.42□□□□□ -0.9
COPB1-201ENST00000249923 KCMF1Q9P0J7 381 aa9.42□□□□□ -0.9
COPB1-201ENST00000249923 H2AFY2Q9P0M6 372 aaPredicted RBP9.42□□□□□ -0.9
COPB1-201ENST00000249923 TBC1D29Q9UFV1 150 aa9.42□□□□□ -0.9
COPB1-201ENST00000249923 KLF15Q9UIH9 416 aa9.42□□□□□ -0.9
COPB1-201ENST00000249923 SYT5O00445 386 aa9.42□□□□□ -0.9
COPB1-201ENST00000249923 LYPD3O95274 346 aa9.42□□□□□ -0.9
COPB1-201ENST00000249923 ASGR2P07307 311 aa9.42□□□□□ -0.9
COPB1-201ENST00000249923 NR2F6P10588 404 aa9.42□□□□□ -0.9
COPB1-201ENST00000249923 IL9P15248 144 aa9.42□□□□□ -0.9
COPB1-201ENST00000249923 MAT2AP31153 395 aaKnown RBP9.42□□□□□ -0.9
COPB1-201ENST00000249923 EVI2BP34910 448 aa9.42□□□□□ -0.9
COPB1-201ENST00000249923 MLLT3P42568 568 aaPredicted RBP9.42□□□□□ -0.9
COPB1-201ENST00000249923 GALK2Q01415 458 aa9.42□□□□□ -0.9
COPB1-201ENST00000249923 PDGFRLQ15198 375 aa9.42□□□□□ -0.9
COPB1-201ENST00000249923 HYAL4Q2M3T9 481 aa9.42□□□□□ -0.9
COPB1-201ENST00000249923 MZT2BQ6NZ67 158 aa9.42□□□□□ -0.9
COPB1-201ENST00000249923 XKRXQ6PP77 449 aa9.42□□□□□ -0.9
COPB1-201ENST00000249923 ZNF836Q6ZNA1 936 aa9.42□□□□□ -0.9
COPB1-201ENST00000249923 TMEFF1Q8IYR6 380 aa9.42□□□□□ -0.9
COPB1-201ENST00000249923 ZNF614Q8N883 585 aa9.42□□□□□ -0.9
COPB1-201ENST00000249923 TEX47Q8TBZ9 253 aa9.42□□□□□ -0.9
COPB1-201ENST00000249923 SMAP2Q8WU79 429 aaPredicted RBP9.42□□□□□ -0.9
COPB1-201ENST00000249923 RIT1Q92963 219 aa9.42□□□□□ -0.9
COPB1-201ENST00000249923 KISS1RQ969F8 398 aaPredicted RBP9.42□□□□□ -0.9
COPB1-201ENST00000249923 C1QTNF6Q9BXI9 259 aa9.42□□□□□ -0.9
COPB1-201ENST00000249923 CLEC4MQ9H2X3 399 aaPredicted RBP9.42□□□□□ -0.9
COPB1-201ENST00000249923 CA5BQ9Y2D0 317 aa9.42□□□□□ -0.9
COPB1-201ENST00000249923 H0Y8X5 98 aa9.41□□□□□ -0.9
COPB1-201ENST00000249923 EMC8O43402 210 aa9.41□□□□□ -0.9
COPB1-201ENST00000249923 ZNF888P0CJ79 500 aaPredicted RBP9.41□□□□□ -0.9
COPB1-201ENST00000249923 ALAS2P22557 587 aa9.41□□□□□ -0.9
COPB1-201ENST00000249923 DDOSTP39656 456 aa9.41□□□□□ -0.9
COPB1-201ENST00000249923 CDH11P55287 796 aa9.41□□□□□ -0.9
COPB1-201ENST00000249923 CTBP2P56545 445 aa9.41□□□□□ -0.9
COPB1-201ENST00000249923 PPP2CBP62714 309 aa9.41□□□□□ -0.9
COPB1-201ENST00000249923 PPP2CAP67775 309 aa9.41□□□□□ -0.9
COPB1-201ENST00000249923 BTN3A2P78410 334 aa9.41□□□□□ -0.9
COPB1-201ENST00000249923 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.41□□□□□ -0.9
COPB1-201ENST00000249923 FAM205BPQ63HN1 556 aa9.41□□□□□ -0.9
COPB1-201ENST00000249923 PRSS41Q7RTY9 318 aa9.41□□□□□ -0.9
COPB1-201ENST00000249923 GALNT6Q8NCL4 622 aa9.41□□□□□ -0.9
COPB1-201ENST00000249923 GNPDA2Q8TDQ7 276 aa9.41□□□□□ -0.9
COPB1-201ENST00000249923 GAL3ST1Q99999 423 aa9.41□□□□□ -0.9
COPB1-201ENST00000249923 FAIM2Q9BWQ8 316 aa9.41□□□□□ -0.9
COPB1-201ENST00000249923 RNF121Q9H920 327 aa9.41□□□□□ -0.9
COPB1-201ENST00000249923 EVA1BQ9NVM1 165 aa9.41□□□□□ -0.9
COPB1-201ENST00000249923 MRPS2Q9Y399 296 aaKnown RBP9.41□□□□□ -0.9
COPB1-201ENST00000249923 ARHGEF17Q96PE2 2063 aaPredicted RBP9.41□□□□□ -0.9
COPB1-201ENST00000249923 F5P12259 2224 aa9.41□□□□□ -0.9
COPB1-201ENST00000249923 CTSVO60911 334 aa9.41□□□□□ -0.9
COPB1-201ENST00000249923 HLA-DQB1P01920 261 aa9.41□□□□□ -0.9
COPB1-201ENST00000249923 HRGP04196 525 aa9.41□□□□□ -0.9
COPB1-201ENST00000249923 ALPPP05187 535 aa9.41□□□□□ -0.9
COPB1-201ENST00000249923 FPR3P25089 353 aa9.41□□□□□ -0.9
COPB1-201ENST00000249923 AK4P27144 223 aaPredicted RBP9.41□□□□□ -0.9
COPB1-201ENST00000249923 AHRP35869 848 aa9.41□□□□□ -0.9
COPB1-201ENST00000249923 TALDO1P37837 337 aa9.41□□□□□ -0.9
COPB1-201ENST00000249923 OR3A3P47888 321 aa9.41□□□□□ -0.9
COPB1-201ENST00000249923 AP2S1P53680 142 aaPredicted RBP9.41□□□□□ -0.9
COPB1-201ENST00000249923 TGM3Q08188 693 aa9.41□□□□□ -0.9
COPB1-201ENST00000249923 TRAM2Q15035 370 aa9.41□□□□□ -0.9
COPB1-201ENST00000249923 DUSP5Q16690 384 aa9.41□□□□□ -0.9
COPB1-201ENST00000249923 KLHL22Q53GT1 634 aa9.41□□□□□ -0.9
COPB1-201ENST00000249923 MFSD12Q6NUT3 480 aa9.41□□□□□ -0.9
COPB1-201ENST00000249923 CNIH2Q6PI25 160 aa9.41□□□□□ -0.9
COPB1-201ENST00000249923 MARCH9Q86YJ5 346 aa9.41□□□□□ -0.9
COPB1-201ENST00000249923 MFSD9Q8NBP5 474 aa9.41□□□□□ -0.9
COPB1-201ENST00000249923 TMEM52Q8NDY8 209 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms