RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 CT45A8P0DMV1 189 aa21.52■■□□□ 1.04
MSX2-201ENST00000239243 CT45A9P0DMV2 189 aa21.52■■□□□ 1.04
MSX2-201ENST00000239243 EPHA8P29322 1005 aaPredicted RBP21.52■■□□□ 1.04
MSX2-201ENST00000239243 GCGRP47871 477 aa21.52■■□□□ 1.04
MSX2-201ENST00000239243 RHAGQ02094 409 aa21.52■■□□□ 1.04
MSX2-201ENST00000239243 CT45A2Q5DJT8 189 aa21.52■■□□□ 1.04
MSX2-201ENST00000239243 ARMCX4Q5H9R4 360 aa21.52■■□□□ 1.04
MSX2-201ENST00000239243 PMS2CLQ68D20 193 aa21.52■■□□□ 1.04
MSX2-201ENST00000239243 CDK20Q8IZL9 346 aa21.52■■□□□ 1.04
MSX2-201ENST00000239243 FGF11Q92914 225 aa21.52■■□□□ 1.04
MSX2-201ENST00000239243 LGALS12Q96DT0 336 aa21.52■■□□□ 1.04
MSX2-201ENST00000239243 HS6ST2Q96MM7 605 aa21.52■■□□□ 1.04
MSX2-201ENST00000239243 TRIM2Q9C040 744 aa21.52■■□□□ 1.04
MSX2-201ENST00000239243 OR2W5A6NFC9 320 aa21.51■■□□□ 1.03
MSX2-201ENST00000239243 C17orf105B2RV13 164 aa21.51■■□□□ 1.03
MSX2-201ENST00000239243 PIP5K1CO60331 668 aa21.51■■□□□ 1.03
MSX2-201ENST00000239243 SERPINB10P48595 397 aa21.51■■□□□ 1.03
MSX2-201ENST00000239243 ATP12AP54707 1039 aa21.51■■□□□ 1.03
MSX2-201ENST00000239243 BNC1Q01954 994 aa21.51■■□□□ 1.03
MSX2-201ENST00000239243 KLHL22Q53GT1 634 aa21.51■■□□□ 1.03
MSX2-201ENST00000239243 LINC00299Q6ZSB3 139 aa21.51■■□□□ 1.03
MSX2-201ENST00000239243 ZNF550Q7Z398 422 aa21.51■■□□□ 1.03
MSX2-201ENST00000239243 CROCCP3Q8IVE0 287 aa21.51■■□□□ 1.03
MSX2-201ENST00000239243 OIT3Q8WWZ8 545 aa21.51■■□□□ 1.03
MSX2-201ENST00000239243 CNOT9Q92600 299 aaKnown RBP21.51■■□□□ 1.03
MSX2-201ENST00000239243 ZNF582Q96NG8 517 aaPredicted RBP21.51■■□□□ 1.03
MSX2-201ENST00000239243 ZNF768Q9H5H4 540 aaKnown RBP21.51■■□□□ 1.03
MSX2-201ENST00000239243 CFL2Q9Y281 166 aa21.51■■□□□ 1.03
MSX2-201ENST00000239243 EFCAB9A8MZ26 197 aa21.51■■□□□ 1.03
MSX2-201ENST00000239243 PRODHO43272 600 aa21.51■■□□□ 1.03
MSX2-201ENST00000239243 AIREO43918 545 aa21.51■■□□□ 1.03
MSX2-201ENST00000239243 NTN1O95631 604 aa21.51■■□□□ 1.03
MSX2-201ENST00000239243 OR1D4P47884 311 aa21.51■■□□□ 1.03
MSX2-201ENST00000239243 CLK1P49759 484 aaKnown RBP21.51■■□□□ 1.03
MSX2-201ENST00000239243 VBP1P61758 197 aa21.51■■□□□ 1.03
MSX2-201ENST00000239243 FGFBP1Q14512 234 aa21.51■■□□□ 1.03
MSX2-201ENST00000239243 MED22Q15528 200 aa21.51■■□□□ 1.03
MSX2-201ENST00000239243 DGUOKQ16854 277 aa21.51■■□□□ 1.03
MSX2-201ENST00000239243 CPEB4Q17RY0 729 aaKnown RBP eCLIP21.51■■□□□ 1.03
MSX2-201ENST00000239243 RNF217Q8TC41 542 aa21.51■■□□□ 1.03
MSX2-201ENST00000239243 CCDC74AQ96AQ1 378 aa21.51■■□□□ 1.03
MSX2-201ENST00000239243 DNAJB12Q9NXW2 375 aaKnown RBP21.51■■□□□ 1.03
MSX2-201ENST00000239243 NPIPB9F8W1W9 429 aa21.5■■□□□ 1.03
MSX2-201ENST00000239243 DSCR3O14972 297 aa21.5■■□□□ 1.03
MSX2-201ENST00000239243 CHP2O43745 196 aa21.5■■□□□ 1.03
MSX2-201ENST00000239243 LYPD3O95274 346 aa21.5■■□□□ 1.03
MSX2-201ENST00000239243 FOLR1P15328 257 aa21.5■■□□□ 1.03
MSX2-201ENST00000239243 LSM3P62310 102 aaKnown RBP21.5■■□□□ 1.03
MSX2-201ENST00000239243 PRKCDQ05655 676 aa21.5■■□□□ 1.03
MSX2-201ENST00000239243 RPL13AP3Q6NVV1 102 aa21.5■■□□□ 1.03
MSX2-201ENST00000239243 OR2T33Q8NG76 320 aa21.5■■□□□ 1.03
MSX2-201ENST00000239243 PLEKHA8Q96JA3 519 aa21.5■■□□□ 1.03
MSX2-201ENST00000239243 MND1Q9BWT6 205 aa21.5■■□□□ 1.03
MSX2-201ENST00000239243 ZNF304Q9HCX3 659 aa21.5■■□□□ 1.03
MSX2-201ENST00000239243 DHCR7Q9UBM7 475 aaKnown RBP21.5■■□□□ 1.03
MSX2-201ENST00000239243 ZNF223Q9UK11 482 aaPredicted RBP21.5■■□□□ 1.03
MSX2-201ENST00000239243 MED31Q9Y3C7 131 aa21.5■■□□□ 1.03
MSX2-201ENST00000239243 A8MU76 341 aa21.49■■□□□ 1.03
MSX2-201ENST00000239243 HMGN1P05114 100 aa21.49■■□□□ 1.03
MSX2-201ENST00000239243 RPLP0P05388 317 aaKnown RBP21.49■■□□□ 1.03
MSX2-201ENST00000239243 FBLP22087 321 aaKnown RBP21.49■■□□□ 1.03
MSX2-201ENST00000239243 RGS6P49758 472 aa21.49■■□□□ 1.03
MSX2-201ENST00000239243 PLAURQ03405 335 aa21.49■■□□□ 1.03
MSX2-201ENST00000239243 CLEC12AQ5QGZ9 265 aa21.49■■□□□ 1.03
MSX2-201ENST00000239243 BCORP1Q8N888 145 aa21.49■■□□□ 1.03
MSX2-201ENST00000239243 MGLLQ99685 303 aa21.49■■□□□ 1.03
MSX2-201ENST00000239243 DIMT1Q9UNQ2 313 aaKnown RBP21.49■■□□□ 1.03
MSX2-201ENST00000239243 A0A0B4J2E0 115 aa21.49■■□□□ 1.03
MSX2-201ENST00000239243 A0A1B0GX12 115 aa21.49■■□□□ 1.03
MSX2-201ENST00000239243 UNC119BA6NIH7 251 aa21.49■■□□□ 1.03
MSX2-201ENST00000239243 POLR1CO15160 346 aaPredicted RBP21.49■■□□□ 1.03
MSX2-201ENST00000239243 HSMCR30P0CW71 290 aa21.49■■□□□ 1.03
MSX2-201ENST00000239243 ENTPD1P49961 510 aa21.49■■□□□ 1.03
MSX2-201ENST00000239243 PGGHGQ32M88 737 aa21.49■■□□□ 1.03
MSX2-201ENST00000239243 TIMM50Q3ZCQ8 353 aa21.49■■□□□ 1.03
MSX2-201ENST00000239243 LSMEM1Q8N8F7 131 aa21.49■■□□□ 1.03
MSX2-201ENST00000239243 NDNFQ8TB73 568 aa21.49■■□□□ 1.03
MSX2-201ENST00000239243 BRIX1Q8TDN6 353 aaKnown RBP21.49■■□□□ 1.03
MSX2-201ENST00000239243 RFKQ969G6 155 aa21.49■■□□□ 1.03
MSX2-201ENST00000239243 SENP5Q96HI0 755 aaPredicted RBP21.49■■□□□ 1.03
MSX2-201ENST00000239243 PRMT8Q9NR22 394 aaPredicted RBP21.49■■□□□ 1.03
MSX2-201ENST00000239243 PNO1Q9NRX1 252 aaKnown RBP21.49■■□□□ 1.03
MSX2-201ENST00000239243 MRPS18AQ9NVS2 196 aaKnown RBP21.49■■□□□ 1.03
MSX2-201ENST00000239243 TAS2R16Q9NYV7 291 aa21.49■■□□□ 1.03
MSX2-201ENST00000239243 IGKV3D-11A0A0A0MRZ8 115 aa21.48■■□□□ 1.03
MSX2-201ENST00000239243 A0A1B0GTQ1 180 aa21.48■■□□□ 1.03
MSX2-201ENST00000239243 A0A1B0GX78 115 aa21.48■■□□□ 1.03
MSX2-201ENST00000239243 RAB36O95755 333 aa21.48■■□□□ 1.03
MSX2-201ENST00000239243 CLPSP04118 112 aa21.48■■□□□ 1.03
MSX2-201ENST00000239243 RBM34P42696 430 aaKnown RBP21.48■■□□□ 1.03
MSX2-201ENST00000239243 RNF144AP50876 292 aaPredicted RBP21.48■■□□□ 1.03
MSX2-201ENST00000239243 NCS1P62166 190 aa21.48■■□□□ 1.03
MSX2-201ENST00000239243 KHDRBS1Q07666 443 aaKnown RBP eCLIP21.48■■□□□ 1.03
MSX2-201ENST00000239243 ZNF829Q3KNS6 432 aaPredicted RBP21.48■■□□□ 1.03
MSX2-201ENST00000239243 MINDY4Q4G0A6 757 aa21.48■■□□□ 1.03
MSX2-201ENST00000239243 WDR88Q6ZMY6 472 aa21.48■■□□□ 1.03
MSX2-201ENST00000239243 BCDIN3DQ7Z5W3 292 aaKnown RBP21.48■■□□□ 1.03
MSX2-201ENST00000239243 SLC34A3Q8N130 599 aa21.48■■□□□ 1.03
MSX2-201ENST00000239243 PTPMT1Q8WUK0 201 aaPredicted RBP21.48■■□□□ 1.03
MSX2-201ENST00000239243 ZHX1-C8orf76Q96EF9 292 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms