RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 NR1H2P55055 460 aa12.2□□□□□ -0.46
SLIRP-201ENST00000238688 TPD52P55327 224 aaPredicted RBP12.2□□□□□ -0.46
SLIRP-201ENST00000238688 RGS8P57771 180 aaPredicted RBP12.2□□□□□ -0.46
SLIRP-201ENST00000238688 EEF1A1P68104 462 aaKnown RBP12.2□□□□□ -0.46
SLIRP-201ENST00000238688 MYBPC1Q00872 1141 aa12.2□□□□□ -0.46
SLIRP-201ENST00000238688 ALDH6A1Q02252 535 aaKnown RBP12.2□□□□□ -0.46
SLIRP-201ENST00000238688 NPRL3Q12980 569 aa12.2□□□□□ -0.46
SLIRP-201ENST00000238688 ZNF267Q14586 743 aaPredicted RBP12.2□□□□□ -0.46
SLIRP-201ENST00000238688 TRAM2Q15035 370 aa12.2□□□□□ -0.46
SLIRP-201ENST00000238688 DECR1Q16698 335 aa12.2□□□□□ -0.46
SLIRP-201ENST00000238688 EXOC3L2Q2M3D2 409 aa12.2□□□□□ -0.46
SLIRP-201ENST00000238688 NKAIN1Q4KMZ8 207 aa12.2□□□□□ -0.46
SLIRP-201ENST00000238688 TMEM151BQ8IW70 566 aa12.2□□□□□ -0.46
SLIRP-201ENST00000238688 ZNF527Q8NB42 609 aa12.2□□□□□ -0.46
SLIRP-201ENST00000238688 C16orf52Q8NHV5 167 aa12.2□□□□□ -0.46
SLIRP-201ENST00000238688 SENP5Q96HI0 755 aaPredicted RBP12.2□□□□□ -0.46
SLIRP-201ENST00000238688 OR6C1Q96RD1 312 aa12.2□□□□□ -0.46
SLIRP-201ENST00000238688 MBOAT4Q96T53 435 aa12.2□□□□□ -0.46
SLIRP-201ENST00000238688 FEVQ99581 238 aa12.2□□□□□ -0.46
SLIRP-201ENST00000238688 FUZQ9BT04 418 aa12.2□□□□□ -0.46
SLIRP-201ENST00000238688 SMURF2Q9HAU4 748 aa12.2□□□□□ -0.46
SLIRP-201ENST00000238688 NECTIN3Q9NQS3 549 aa12.2□□□□□ -0.46
SLIRP-201ENST00000238688 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.2□□□□□ -0.46
SLIRP-201ENST00000238688 C19orf25Q9UFG5 118 aaPredicted RBP12.2□□□□□ -0.46
SLIRP-201ENST00000238688 A4GNTQ9UNA3 340 aa12.2□□□□□ -0.46
SLIRP-201ENST00000238688 SLC35A3Q9Y2D2 325 aa12.2□□□□□ -0.46
SLIRP-201ENST00000238688 GPR55Q9Y2T6 319 aaPredicted RBP12.2□□□□□ -0.46
SLIRP-201ENST00000238688 KCNE3Q9Y6H6 103 aa12.2□□□□□ -0.46
SLIRP-201ENST00000238688 NBASA2RRP1 2371 aa12.2□□□□□ -0.46
SLIRP-201ENST00000238688 MYO18BQ8IUG5 2567 aa12.2□□□□□ -0.46
SLIRP-201ENST00000238688 FLNBO75369 2602 aaKnown RBP12.19□□□□□ -0.46
SLIRP-201ENST00000238688 SMIM31A0A1B0GVY4 71 aa12.19□□□□□ -0.46
SLIRP-201ENST00000238688 SH3PXD2BA1X283 911 aa12.19□□□□□ -0.46
SLIRP-201ENST00000238688 CDHR4A6H8M9 788 aa12.19□□□□□ -0.46
SLIRP-201ENST00000238688 A6NHS1 94 aa12.19□□□□□ -0.46
SLIRP-201ENST00000238688 VSTM2BA6NLU5 285 aa12.19□□□□□ -0.46
SLIRP-201ENST00000238688 TO15178 435 aa12.19□□□□□ -0.46
SLIRP-201ENST00000238688 ZIC2O95409 532 aaPredicted RBP12.19□□□□□ -0.46
SLIRP-201ENST00000238688 CLPTM1O96005 669 aa12.19□□□□□ -0.46
SLIRP-201ENST00000238688 NGFRP08138 427 aa12.19□□□□□ -0.46
SLIRP-201ENST00000238688 CCNYL3P0C7X3 344 aa12.19□□□□□ -0.46
SLIRP-201ENST00000238688 ZNF28P17035 718 aa12.19□□□□□ -0.46
SLIRP-201ENST00000238688 MAOAP21397 527 aa12.19□□□□□ -0.46
SLIRP-201ENST00000238688 TTKP33981 857 aa12.19□□□□□ -0.46
SLIRP-201ENST00000238688 OR1D4P47884 311 aa12.19□□□□□ -0.46
SLIRP-201ENST00000238688 GTF2A1P52655 376 aaPredicted RBP12.19□□□□□ -0.46
SLIRP-201ENST00000238688 UGT2B15P54855 530 aa12.19□□□□□ -0.46
SLIRP-201ENST00000238688 SLC37A1P57057 533 aa12.19□□□□□ -0.46
SLIRP-201ENST00000238688 BTG2P78543 158 aa12.19□□□□□ -0.46
SLIRP-201ENST00000238688 APOFQ13790 326 aa12.19□□□□□ -0.46
SLIRP-201ENST00000238688 EXOSC7Q15024 291 aaKnown RBP12.19□□□□□ -0.46
SLIRP-201ENST00000238688 NSDHLQ15738 373 aa12.19□□□□□ -0.46
SLIRP-201ENST00000238688 MINDY4Q4G0A6 757 aa12.19□□□□□ -0.46
SLIRP-201ENST00000238688 FLYWCH1Q4VC44 716 aa12.19□□□□□ -0.46
SLIRP-201ENST00000238688 ZNF385CQ66K41 422 aaPredicted RBP12.19□□□□□ -0.46
SLIRP-201ENST00000238688 ZNF770Q6IQ21 691 aaPredicted RBP12.19□□□□□ -0.46
SLIRP-201ENST00000238688 DEF8Q6ZN54 512 aa12.19□□□□□ -0.46
SLIRP-201ENST00000238688 OVCH1Q7RTY7 1134 aa12.19□□□□□ -0.46
SLIRP-201ENST00000238688 ZNF550Q7Z398 422 aa12.19□□□□□ -0.46
SLIRP-201ENST00000238688 RNF113BQ8IZP6 322 aaKnown RBP12.19□□□□□ -0.46
SLIRP-201ENST00000238688 SLC43A2Q8N370 569 aa12.19□□□□□ -0.46
SLIRP-201ENST00000238688 OR6T1Q8NGN1 323 aa12.19□□□□□ -0.46
SLIRP-201ENST00000238688 OR8K3Q8NH51 312 aa12.19□□□□□ -0.46
SLIRP-201ENST00000238688 ADAMTS16Q8TE57 1224 aa12.19□□□□□ -0.46
SLIRP-201ENST00000238688 PTPMT1Q8WUK0 201 aaPredicted RBP12.19□□□□□ -0.46
SLIRP-201ENST00000238688 RNF31Q96EP0 1072 aa12.19□□□□□ -0.46
SLIRP-201ENST00000238688 HSPBAP1Q96EW2 488 aa12.19□□□□□ -0.46
SLIRP-201ENST00000238688 ZNF559Q9BR84 538 aa12.19□□□□□ -0.46
SLIRP-201ENST00000238688 CNPPD1Q9BV87 410 aa12.19□□□□□ -0.46
SLIRP-201ENST00000238688 VCX3AQ9NNX9 186 aa12.19□□□□□ -0.46
SLIRP-201ENST00000238688 CCNB1IP1Q9NPC3 277 aa12.19□□□□□ -0.46
SLIRP-201ENST00000238688 DHCR7Q9UBM7 475 aaKnown RBP12.19□□□□□ -0.46
SLIRP-201ENST00000238688 CBLCQ9ULV8 474 aa12.19□□□□□ -0.46
SLIRP-201ENST00000238688 ERVK-19Q9WJR5 959 aa12.19□□□□□ -0.46
SLIRP-201ENST00000238688 MAGED1Q9Y5V3 778 aaPredicted RBP12.19□□□□□ -0.46
SLIRP-201ENST00000238688 NPIPB9F8W1W9 429 aa12.18□□□□□ -0.46
SLIRP-201ENST00000238688 FFAR1O14842 300 aa12.18□□□□□ -0.46
SLIRP-201ENST00000238688 FCMRO60667 390 aa12.18□□□□□ -0.46
SLIRP-201ENST00000238688 CDC123O75794 336 aaPredicted RBP12.18□□□□□ -0.46
SLIRP-201ENST00000238688 STK17BO94768 372 aa12.18□□□□□ -0.46
SLIRP-201ENST00000238688 DIRAS1O95057 198 aa12.18□□□□□ -0.46
SLIRP-201ENST00000238688 KLK3P07288 261 aaPredicted RBP12.18□□□□□ -0.46
SLIRP-201ENST00000238688 FAM87AP0C7U9 286 aa12.18□□□□□ -0.46
SLIRP-201ENST00000238688 CT45A8P0DMV1 189 aa12.18□□□□□ -0.46
SLIRP-201ENST00000238688 CT45A9P0DMV2 189 aa12.18□□□□□ -0.46
SLIRP-201ENST00000238688 F8A1P23610 371 aa12.18□□□□□ -0.46
SLIRP-201ENST00000238688 HLCSP50747 726 aa12.18□□□□□ -0.46
SLIRP-201ENST00000238688 ATP12AP54707 1039 aa12.18□□□□□ -0.46
SLIRP-201ENST00000238688 TAS2R41P59536 307 aa12.18□□□□□ -0.46
SLIRP-201ENST00000238688 SYT16Q17RD7 645 aa12.18□□□□□ -0.46
SLIRP-201ENST00000238688 CT45A2Q5DJT8 189 aa12.18□□□□□ -0.46
SLIRP-201ENST00000238688 ZNF613Q6PF04 617 aa12.18□□□□□ -0.46
SLIRP-201ENST00000238688 HS3ST5Q8IZT8 346 aa12.18□□□□□ -0.46
SLIRP-201ENST00000238688 NLGN4XQ8N0W4 816 aa12.18□□□□□ -0.46
SLIRP-201ENST00000238688 SLC5A8Q8N695 610 aa12.18□□□□□ -0.46
SLIRP-201ENST00000238688 IL22RA1Q8N6P7 574 aa12.18□□□□□ -0.46
SLIRP-201ENST00000238688 NLGN4YQ8NFZ3 816 aaPredicted RBP12.18□□□□□ -0.46
SLIRP-201ENST00000238688 TSPAN14Q8NG11 270 aa12.18□□□□□ -0.46
SLIRP-201ENST00000238688 OR1N1Q8NGS0 311 aa12.18□□□□□ -0.46
SLIRP-201ENST00000238688 STT3BQ8TCJ2 826 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms