RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 FKTNO75072 461 aa11.55□□□□□ -0.56
NUP88-201ENST00000225696 TOXO94900 526 aa11.55□□□□□ -0.56
NUP88-201ENST00000225696 NFATC1O95644 943 aa11.55□□□□□ -0.56
NUP88-201ENST00000225696 MT-ND4P03905 459 aa11.55□□□□□ -0.56
NUP88-201ENST00000225696 TPOP07202 933 aa11.55□□□□□ -0.56
NUP88-201ENST00000225696 CFL1P23528 166 aaKnown RBP11.55□□□□□ -0.56
NUP88-201ENST00000225696 CERS1P27544 350 aa11.55□□□□□ -0.56
NUP88-201ENST00000225696 NTSP30990 170 aa11.55□□□□□ -0.56
NUP88-201ENST00000225696 IFNGR2P38484 337 aa11.55□□□□□ -0.56
NUP88-201ENST00000225696 STAT5AP42229 794 aa11.55□□□□□ -0.56
NUP88-201ENST00000225696 VEGFBP49765 207 aa11.55□□□□□ -0.56
NUP88-201ENST00000225696 CLCNKAP51800 687 aa11.55□□□□□ -0.56
NUP88-201ENST00000225696 RGS8P57771 180 aaPredicted RBP11.55□□□□□ -0.56
NUP88-201ENST00000225696 POU6F2P78424 691 aaPredicted RBP11.55□□□□□ -0.56
NUP88-201ENST00000225696 RGS1Q08116 209 aa11.55□□□□□ -0.56
NUP88-201ENST00000225696 RPA4Q13156 261 aa11.55□□□□□ -0.56
NUP88-201ENST00000225696 MLF2Q15773 248 aaPredicted RBP11.55□□□□□ -0.56
NUP88-201ENST00000225696 KLHL12Q53G59 568 aa11.55□□□□□ -0.56
NUP88-201ENST00000225696 BICRALQ6AI39 1079 aa11.55□□□□□ -0.56
NUP88-201ENST00000225696 NIPAL3Q6P499 406 aa11.55□□□□□ -0.56
NUP88-201ENST00000225696 PRSS45Q7RTY3 260 aa11.55□□□□□ -0.56
NUP88-201ENST00000225696 ACOT4Q8N9L9 421 aa11.55□□□□□ -0.56
NUP88-201ENST00000225696 SPERTQ8NA61 448 aa11.55□□□□□ -0.56
NUP88-201ENST00000225696 SLC16A11Q8NCK7 471 aa11.55□□□□□ -0.56
NUP88-201ENST00000225696 PFN4Q8NHR9 129 aa11.55□□□□□ -0.56
NUP88-201ENST00000225696 THAP4Q8WY91 577 aa11.55□□□□□ -0.56
NUP88-201ENST00000225696 ACOT12Q8WYK0 555 aa11.55□□□□□ -0.56
NUP88-201ENST00000225696 PTP4A1Q93096 173 aa11.55□□□□□ -0.56
NUP88-201ENST00000225696 YIPF5Q969M3 257 aa11.55□□□□□ -0.56
NUP88-201ENST00000225696 OMA1Q96E52 524 aa11.55□□□□□ -0.56
NUP88-201ENST00000225696 KLHL1Q9NR64 748 aa11.55□□□□□ -0.56
NUP88-201ENST00000225696 NLGN3Q9NZ94 848 aa11.55□□□□□ -0.56
NUP88-201ENST00000225696 H2AFY2Q9P0M6 372 aaPredicted RBP11.55□□□□□ -0.56
NUP88-201ENST00000225696 CHD9Q3L8U1 2897 aa11.55□□□□□ -0.56
NUP88-201ENST00000225696 G3V3Q6 166 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 I3L521 148 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 HPXP02790 462 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 CISD3P0C7P0 127 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 DRD2P14416 443 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 NDUFV2P19404 249 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 MAKP20794 623 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 DRD5P21918 477 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 PRKACBP22694 351 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 NOS3P29474 1203 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 RBMS1P29558 406 aaKnown RBP11.54□□□□□ -0.56
NUP88-201ENST00000225696 ACSL1P33121 698 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 TALDO1P37837 337 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 HCCSP53701 268 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 VSX2P58304 361 aaPredicted RBP11.54□□□□□ -0.56
NUP88-201ENST00000225696 ZP1P60852 638 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 CAMK2DQ13557 499 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 GNA13Q14344 377 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 ZNF77Q15935 545 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 DECR1Q16698 335 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 PXDC1Q5TGL8 231 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 IDO2Q6ZQW0 420 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 MBOAT2Q6ZWT7 520 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 CACUL1Q86Y37 369 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 IZUMO1Q8IYV9 350 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 NUP43Q8NFH3 380 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 OR2A1Q8NGT9 310 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 SLC35A4Q96G79 324 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 ZNF764Q96H86 408 aaPredicted RBP11.54□□□□□ -0.56
NUP88-201ENST00000225696 C12orf66Q96MD2 445 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 CAMK1GQ96NX5 476 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 SORCS2Q96PQ0 1159 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 PRDM7Q9NQW5 492 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 SLC13A4Q9UKG4 626 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 CES1P1Q9UKY3 287 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 TMEM5Q9Y2B1 443 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 AUP1Q9Y679 476 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 DAPL1A0PJW8 107 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 A8MUA0 341 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 B8ZZF3 427 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 SYT5O00445 386 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 GPR171O14626 319 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 DHFRP00374 187 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 UBL4AP11441 157 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 ADRB3P13945 408 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 SNRPBP14678 240 aaKnown RBP11.54□□□□□ -0.56
NUP88-201ENST00000225696 SOX9P48436 509 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 OR12D2P58182 307 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 EXOSC2Q13868 293 aaKnown RBP11.54□□□□□ -0.56
NUP88-201ENST00000225696 CAMK1Q14012 370 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 SLC9A5Q14940 896 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 METRNLQ641Q3 311 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 FAM111BQ6SJ93 734 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 THSD4Q6ZMP0 1018 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 SSX6Q7RTT6 188 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 SLAIN1Q8ND83 568 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 OR51Q1Q8NH59 317 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 CEP76Q8TAP6 659 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 ABHD4Q8TB40 342 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 ING5Q8WYH8 240 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 GCDHQ92947 438 aaPredicted RBP11.54□□□□□ -0.56
NUP88-201ENST00000225696 MS4A6EQ96DS6 147 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 ELP4Q96EB1 424 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 GIMAP5Q96F15 307 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 AHCYL2Q96HN2 611 aaKnown RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 695.3 ms