RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 H2AFY2Q9P0M6 372 aaPredicted RBP23.18■■□□□ 1.3
RUNDC3A-201ENST00000225441 PTGFRNQ9P2B2 879 aa23.18■■□□□ 1.3
RUNDC3A-201ENST00000225441 CHST2Q9Y4C5 530 aa23.18■■□□□ 1.3
RUNDC3A-201ENST00000225441 TRIM3O75382 744 aaPredicted RBP23.17■■□□□ 1.3
RUNDC3A-201ENST00000225441 RNF144AP50876 292 aaPredicted RBP23.17■■□□□ 1.3
RUNDC3A-201ENST00000225441 ZNF750Q32MQ0 723 aa23.17■■□□□ 1.3
RUNDC3A-201ENST00000225441 GDF7Q7Z4P5 450 aa23.17■■□□□ 1.3
RUNDC3A-201ENST00000225441 BRIX1Q8TDN6 353 aaKnown RBP23.17■■□□□ 1.3
RUNDC3A-201ENST00000225441 ACOT12Q8WYK0 555 aa23.17■■□□□ 1.3
RUNDC3A-201ENST00000225441 ST6GAL2Q96JF0 529 aa23.17■■□□□ 1.3
RUNDC3A-201ENST00000225441 TP63Q9H3D4 680 aaPredicted RBP23.17■■□□□ 1.3
RUNDC3A-201ENST00000225441 CNIH4Q9P003 139 aa23.17■■□□□ 1.3
RUNDC3A-201ENST00000225441 TBC1D29Q9UFV1 150 aa23.17■■□□□ 1.3
RUNDC3A-201ENST00000225441 KLF15Q9UIH9 416 aa23.17■■□□□ 1.3
RUNDC3A-201ENST00000225441 ZNF443Q9Y2A4 671 aaPredicted RBP23.17■■□□□ 1.3
RUNDC3A-201ENST00000225441 GPR55Q9Y2T6 319 aaPredicted RBP23.17■■□□□ 1.3
RUNDC3A-201ENST00000225441 CENPXA8MT69 81 aa23.17■■□□□ 1.3
RUNDC3A-201ENST00000225441 C8orf89P0DMQ9 161 aa23.17■■□□□ 1.3
RUNDC3A-201ENST00000225441 GNSP15586 552 aa23.17■■□□□ 1.3
RUNDC3A-201ENST00000225441 CD53P19397 219 aa23.17■■□□□ 1.3
RUNDC3A-201ENST00000225441 HLA-DMAP28067 261 aa23.17■■□□□ 1.3
RUNDC3A-201ENST00000225441 ACTR1BP42025 376 aa23.17■■□□□ 1.3
RUNDC3A-201ENST00000225441 NR4A2P43354 598 aa23.17■■□□□ 1.3
RUNDC3A-201ENST00000225441 ACTR1AP61163 376 aa23.17■■□□□ 1.3
RUNDC3A-201ENST00000225441 DUSP8Q13202 625 aa23.17■■□□□ 1.3
RUNDC3A-201ENST00000225441 TCEA2Q15560 299 aa23.17■■□□□ 1.3
RUNDC3A-201ENST00000225441 ZFP69Q49AA0 526 aa23.17■■□□□ 1.3
RUNDC3A-201ENST00000225441 PYDC2Q56P42 97 aa23.17■■□□□ 1.3
RUNDC3A-201ENST00000225441 FRRS1Q6ZNA5 592 aa23.17■■□□□ 1.3
RUNDC3A-201ENST00000225441 PARGQ86W56 976 aa23.17■■□□□ 1.3
RUNDC3A-201ENST00000225441 OR4Q3Q8NH05 313 aa23.17■■□□□ 1.3
RUNDC3A-201ENST00000225441 C1orf216Q8TAB5 229 aa23.17■■□□□ 1.3
RUNDC3A-201ENST00000225441 CAPSLQ8WWF8 208 aa23.17■■□□□ 1.3
RUNDC3A-201ENST00000225441 CTPS2Q9NRF8 586 aa23.17■■□□□ 1.3
RUNDC3A-201ENST00000225441 CASKO14936 926 aa23.16■■□□□ 1.3
RUNDC3A-201ENST00000225441 ALPPL2P10696 532 aa23.16■■□□□ 1.3
RUNDC3A-201ENST00000225441 TRHRP34981 398 aaPredicted RBP23.16■■□□□ 1.3
RUNDC3A-201ENST00000225441 RAB8AP61006 207 aa23.16■■□□□ 1.3
RUNDC3A-201ENST00000225441 BTN3A2P78410 334 aa23.16■■□□□ 1.3
RUNDC3A-201ENST00000225441 TNFRSF17Q02223 184 aa23.16■■□□□ 1.3
RUNDC3A-201ENST00000225441 ILF3Q12906 894 aaKnown RBP eCLIP23.16■■□□□ 1.3
RUNDC3A-201ENST00000225441 TYW3Q6IPR3 259 aaKnown RBP23.16■■□□□ 1.3
RUNDC3A-201ENST00000225441 RPL13AP3Q6NVV1 102 aa23.16■■□□□ 1.3
RUNDC3A-201ENST00000225441 MZT2BQ6NZ67 158 aa23.16■■□□□ 1.3
RUNDC3A-201ENST00000225441 ASPGQ86U10 573 aa23.16■■□□□ 1.3
RUNDC3A-201ENST00000225441 OR2L13Q8N349 312 aa23.16■■□□□ 1.3
RUNDC3A-201ENST00000225441 DNAJA4Q8WW22 397 aaPredicted RBP23.16■■□□□ 1.3
RUNDC3A-201ENST00000225441 DNASE2BQ8WZ79 361 aa23.16■■□□□ 1.3
RUNDC3A-201ENST00000225441 SERINC2Q96SA4 455 aa23.16■■□□□ 1.3
RUNDC3A-201ENST00000225441 ZNF649Q9BS31 505 aa23.16■■□□□ 1.3
RUNDC3A-201ENST00000225441 QRSL1Q9H0R6 528 aaKnown RBP23.16■■□□□ 1.3
RUNDC3A-201ENST00000225441 TCEAL2Q9H3H9 227 aaPredicted RBP23.16■■□□□ 1.3
RUNDC3A-201ENST00000225441 SPHK1Q9NYA1 384 aa23.16■■□□□ 1.3
RUNDC3A-201ENST00000225441 GPR52Q9Y2T5 361 aa23.16■■□□□ 1.3
RUNDC3A-201ENST00000225441 URADA6NGE7 173 aa23.15■■□□□ 1.3
RUNDC3A-201ENST00000225441 FAM47E-STBD1D6RA91 191 aa23.15■■□□□ 1.3
RUNDC3A-201ENST00000225441 SLC19A2O60779 497 aa23.15■■□□□ 1.3
RUNDC3A-201ENST00000225441 CHRM5P08912 532 aaPredicted RBP23.15■■□□□ 1.3
RUNDC3A-201ENST00000225441 AZGP1P25311 298 aaKnown RBP23.15■■□□□ 1.3
RUNDC3A-201ENST00000225441 MLLT3P42568 568 aaPredicted RBP23.15■■□□□ 1.3
RUNDC3A-201ENST00000225441 CAPZA2P47755 286 aa23.15■■□□□ 1.3
RUNDC3A-201ENST00000225441 SF3B4Q15427 424 aaKnown RBP eCLIP23.15■■□□□ 1.3
RUNDC3A-201ENST00000225441 ZNF542PQ5EBM4 170 aa23.15■■□□□ 1.3
RUNDC3A-201ENST00000225441 RANBP3LQ86VV4 465 aaPredicted RBP23.15■■□□□ 1.3
RUNDC3A-201ENST00000225441 AMIGO1Q86WK6 493 aa23.15■■□□□ 1.3
RUNDC3A-201ENST00000225441 C1orf210Q8IVY1 113 aa23.15■■□□□ 1.3
RUNDC3A-201ENST00000225441 MAML2Q8IZL2 1156 aaPredicted RBP23.15■■□□□ 1.3
RUNDC3A-201ENST00000225441 FRMD6Q96NE9 622 aa23.15■■□□□ 1.3
RUNDC3A-201ENST00000225441 INPP5EQ9NRR6 644 aa23.15■■□□□ 1.3
RUNDC3A-201ENST00000225441 PCOLCE2Q9UKZ9 415 aa23.15■■□□□ 1.3
RUNDC3A-201ENST00000225441 OR52A4PA6NMU1 304 aa23.15■■□□□ 1.3
RUNDC3A-201ENST00000225441 TLX1P31314 330 aaPredicted RBP23.15■■□□□ 1.3
RUNDC3A-201ENST00000225441 AVPR1BP47901 424 aa23.15■■□□□ 1.3
RUNDC3A-201ENST00000225441 PDX1P52945 283 aa23.15■■□□□ 1.3
RUNDC3A-201ENST00000225441 ZNF155Q12901 538 aaPredicted RBP23.15■■□□□ 1.3
RUNDC3A-201ENST00000225441 C6orf132Q5T0Z8 1188 aa23.15■■□□□ 1.3
RUNDC3A-201ENST00000225441 TMEM105Q8N8V8 129 aa23.15■■□□□ 1.3
RUNDC3A-201ENST00000225441 OR4K14Q8NGD5 310 aa23.15■■□□□ 1.3
RUNDC3A-201ENST00000225441 GPBAR1Q8TDU6 330 aa23.15■■□□□ 1.3
RUNDC3A-201ENST00000225441 ZG16BQ96DA0 208 aa23.15■■□□□ 1.3
RUNDC3A-201ENST00000225441 TM9SF2Q99805 663 aa23.15■■□□□ 1.3
RUNDC3A-201ENST00000225441 MACROD1Q9BQ69 325 aa23.15■■□□□ 1.3
RUNDC3A-201ENST00000225441 PPP1R3EQ9H7J1 279 aa23.15■■□□□ 1.3
RUNDC3A-201ENST00000225441 RNF121Q9H920 327 aa23.15■■□□□ 1.3
RUNDC3A-201ENST00000225441 EQTNQ9NQ60 294 aa23.15■■□□□ 1.3
RUNDC3A-201ENST00000225441 TOR4AQ9NXH8 423 aa23.15■■□□□ 1.3
RUNDC3A-201ENST00000225441 WDR45Q9Y484 360 aa23.15■■□□□ 1.3
RUNDC3A-201ENST00000225441 ISM1B1AKI9 464 aa23.14■■□□□ 1.29
RUNDC3A-201ENST00000225441 B4DXG7 233 aa23.14■■□□□ 1.29
RUNDC3A-201ENST00000225441 J3QRE1 110 aa23.14■■□□□ 1.29
RUNDC3A-201ENST00000225441 FMO6PO60774 539 aa23.14■■□□□ 1.29
RUNDC3A-201ENST00000225441 EML2O95834 649 aa23.14■■□□□ 1.29
RUNDC3A-201ENST00000225441 SMIM10L1P0DMW3 83 aa23.14■■□□□ 1.29
RUNDC3A-201ENST00000225441 ZNF10P21506 573 aaPredicted RBP23.14■■□□□ 1.29
RUNDC3A-201ENST00000225441 TGM4P49221 684 aa23.14■■□□□ 1.29
RUNDC3A-201ENST00000225441 BLKP51451 505 aa23.14■■□□□ 1.29
RUNDC3A-201ENST00000225441 CSTF1Q05048 431 aaKnown RBP23.14■■□□□ 1.29
RUNDC3A-201ENST00000225441 SUZ12Q15022 739 aaKnown RBP23.14■■□□□ 1.29
RUNDC3A-201ENST00000225441 WDR45BQ5MNZ6 344 aa23.14■■□□□ 1.29
RUNDC3A-201ENST00000225441 NKAIN4Q8IVV8 208 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms