RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 OR7G2Q8NG99 324 aa16.08■□□□□ 0.17
USB1-201ENST00000219281 ACOT12Q8WYK0 555 aa16.08■□□□□ 0.17
USB1-201ENST00000219281 SNAPC3Q92966 411 aa16.08■□□□□ 0.17
USB1-201ENST00000219281 JAM3Q9BX67 310 aa16.08■□□□□ 0.17
USB1-201ENST00000219281 KCNN2Q9H2S1 579 aa16.08■□□□□ 0.17
USB1-201ENST00000219281 IGFLR1Q9H665 355 aa16.08■□□□□ 0.17
USB1-201ENST00000219281 NUMA1Q14980 2115 aa16.08■□□□□ 0.16
USB1-201ENST00000219281 EPOPA6NHQ4 379 aa16.08■□□□□ 0.16
USB1-201ENST00000219281 PRICKLE3O43900 615 aaPredicted RBP16.08■□□□□ 0.16
USB1-201ENST00000219281 PAHP00439 452 aa16.08■□□□□ 0.16
USB1-201ENST00000219281 ASGR2P07307 311 aa16.08■□□□□ 0.16
USB1-201ENST00000219281 MAB21L1Q13394 359 aa16.08■□□□□ 0.16
USB1-201ENST00000219281 RUNX3Q13761 415 aa16.08■□□□□ 0.16
USB1-201ENST00000219281 CEBPEQ15744 281 aa16.08■□□□□ 0.16
USB1-201ENST00000219281 ZNF836Q6ZNA1 936 aa16.08■□□□□ 0.16
USB1-201ENST00000219281 NRROSQ86YC3 692 aa16.08■□□□□ 0.16
USB1-201ENST00000219281 AKAP1Q92667 903 aaKnown RBP eCLIP16.08■□□□□ 0.16
USB1-201ENST00000219281 TIMP4Q99727 224 aa16.08■□□□□ 0.16
USB1-201ENST00000219281 DPH1Q9BZG8 443 aa16.08■□□□□ 0.16
USB1-201ENST00000219281 PPIL3Q9H2H8 161 aaKnown RBP16.08■□□□□ 0.16
USB1-201ENST00000219281 SYNDIG1Q9H7V2 258 aa16.08■□□□□ 0.16
USB1-201ENST00000219281 SLC28A3Q9HAS3 691 aa16.08■□□□□ 0.16
USB1-201ENST00000219281 TRPV5Q9NQA5 729 aa16.08■□□□□ 0.16
USB1-201ENST00000219281 OBP2AQ9NY56 170 aa16.08■□□□□ 0.16
USB1-201ENST00000219281 THAP10Q9P2Z0 257 aaPredicted RBP16.08■□□□□ 0.16
USB1-201ENST00000219281 MYO10Q9HD67 2058 aa16.08■□□□□ 0.16
USB1-201ENST00000219281 CENPVL1A0A0U1RR11 272 aa16.07■□□□□ 0.16
USB1-201ENST00000219281 TNFRSF10AO00220 468 aa16.07■□□□□ 0.16
USB1-201ENST00000219281 OR2B3O76000 313 aa16.07■□□□□ 0.16
USB1-201ENST00000219281 EIF4EP06730 217 aaKnown RBP16.07■□□□□ 0.16
USB1-201ENST00000219281 SHC1P29353 583 aa16.07■□□□□ 0.16
USB1-201ENST00000219281 WASP42768 502 aa16.07■□□□□ 0.16
USB1-201ENST00000219281 ARFIP1P53367 373 aa16.07■□□□□ 0.16
USB1-201ENST00000219281 MRPL28Q13084 256 aaKnown RBP16.07■□□□□ 0.16
USB1-201ENST00000219281 HBMQ6B0K9 141 aa16.07■□□□□ 0.16
USB1-201ENST00000219281 HEPHL1Q6MZM0 1159 aa16.07■□□□□ 0.16
USB1-201ENST00000219281 SRFBP1Q8NEF9 429 aaKnown RBP16.07■□□□□ 0.16
USB1-201ENST00000219281 OR5M3Q8NGP4 307 aa16.07■□□□□ 0.16
USB1-201ENST00000219281 CREB3L1Q96BA8 519 aa16.07■□□□□ 0.16
USB1-201ENST00000219281 RAB11FIP5Q9BXF6 653 aa16.07■□□□□ 0.16
USB1-201ENST00000219281 ENKD1Q9H0I2 346 aa16.07■□□□□ 0.16
USB1-201ENST00000219281 OR52D1Q9H346 318 aa16.07■□□□□ 0.16
USB1-201ENST00000219281 GOLGA4Q13439 2230 aaKnown RBP16.07■□□□□ 0.16
USB1-201ENST00000219281 GSAPA4D1B5 854 aa16.07■□□□□ 0.16
USB1-201ENST00000219281 UNC119BA6NIH7 251 aa16.07■□□□□ 0.16
USB1-201ENST00000219281 TFPIP10646 304 aa16.07■□□□□ 0.16
USB1-201ENST00000219281 TBXA2RP21731 343 aa16.07■□□□□ 0.16
USB1-201ENST00000219281 GALP22466 123 aa16.07■□□□□ 0.16
USB1-201ENST00000219281 BDH1Q02338 343 aa16.07■□□□□ 0.16
USB1-201ENST00000219281 KLHL12Q53G59 568 aa16.07■□□□□ 0.16
USB1-201ENST00000219281 FAM27D1Q5T7N8 215 aa16.07■□□□□ 0.16
USB1-201ENST00000219281 AGBL4Q5VU57 503 aa16.07■□□□□ 0.16
USB1-201ENST00000219281 LAMTOR1Q6IAA8 161 aa16.07■□□□□ 0.16
USB1-201ENST00000219281 MFSD12Q6NUT3 480 aa16.07■□□□□ 0.16
USB1-201ENST00000219281 NIPAL3Q6P499 406 aa16.07■□□□□ 0.16
USB1-201ENST00000219281 MEPCEQ7L2J0 689 aaKnown RBP16.07■□□□□ 0.16
USB1-201ENST00000219281 GID4Q8IVV7 300 aa16.07■□□□□ 0.16
USB1-201ENST00000219281 MFSD9Q8NBP5 474 aa16.07■□□□□ 0.16
USB1-201ENST00000219281 KCT2Q8NC54 265 aa16.07■□□□□ 0.16
USB1-201ENST00000219281 OR4M1Q8NGD0 313 aa16.07■□□□□ 0.16
USB1-201ENST00000219281 THAP7Q9BT49 309 aaPredicted RBP16.07■□□□□ 0.16
USB1-201ENST00000219281 GTPBP2Q9BX10 602 aaKnown RBP16.07■□□□□ 0.16
USB1-201ENST00000219281 HCAR1Q9BXC0 346 aa16.07■□□□□ 0.16
USB1-201ENST00000219281 C1QTNF2Q9BXJ5 285 aa16.07■□□□□ 0.16
USB1-201ENST00000219281 MTHFD2LQ9H903 347 aaPredicted RBP16.07■□□□□ 0.16
USB1-201ENST00000219281 ENAMQ9NRM1 1142 aa16.07■□□□□ 0.16
USB1-201ENST00000219281 CYSLTR2Q9NS75 346 aa16.07■□□□□ 0.16
USB1-201ENST00000219281 WDR45Q9Y484 360 aa16.07■□□□□ 0.16
USB1-201ENST00000219281 HSPB11Q9Y547 144 aa16.07■□□□□ 0.16
USB1-201ENST00000219281 DAPL1A0PJW8 107 aa16.06■□□□□ 0.16
USB1-201ENST00000219281 DUXAA6NLW8 204 aa16.06■□□□□ 0.16
USB1-201ENST00000219281 REM1O75628 298 aa16.06■□□□□ 0.16
USB1-201ENST00000219281 ATP12AP54707 1039 aa16.06■□□□□ 0.16
USB1-201ENST00000219281 FXYD6P3P58550 94 aa16.06■□□□□ 0.16
USB1-201ENST00000219281 SNRPNP63162 240 aaKnown RBP16.06■□□□□ 0.16
USB1-201ENST00000219281 FGL2Q14314 439 aa16.06■□□□□ 0.16
USB1-201ENST00000219281 ARL9Q6T311 187 aa16.06■□□□□ 0.16
USB1-201ENST00000219281 MTSS1LQ765P7 747 aa16.06■□□□□ 0.16
USB1-201ENST00000219281 SAMD12Q8N8I0 201 aa16.06■□□□□ 0.16
USB1-201ENST00000219281 OR5W2Q8NH69 310 aa16.06■□□□□ 0.16
USB1-201ENST00000219281 PFN4Q8NHR9 129 aa16.06■□□□□ 0.16
USB1-201ENST00000219281 FANK1Q8TC84 345 aa16.06■□□□□ 0.16
USB1-201ENST00000219281 UBL7Q96S82 380 aaPredicted RBP16.06■□□□□ 0.16
USB1-201ENST00000219281 PBX4Q9BYU1 374 aa16.06■□□□□ 0.16
USB1-201ENST00000219281 KRCC1Q9NPI7 259 aaPredicted RBP16.06■□□□□ 0.16
USB1-201ENST00000219281 SERGEFQ9UGK8 458 aa16.06■□□□□ 0.16
USB1-201ENST00000219281 GPSM3Q9Y4H4 160 aa16.06■□□□□ 0.16
USB1-201ENST00000219281 PRR23AA6NEV1 266 aa16.06■□□□□ 0.16
USB1-201ENST00000219281 KAT7O95251 611 aa16.06■□□□□ 0.16
USB1-201ENST00000219281 PRG2P13727 222 aa16.06■□□□□ 0.16
USB1-201ENST00000219281 SLC6A1P30531 599 aa16.06■□□□□ 0.16
USB1-201ENST00000219281 TALDO1P37837 337 aa16.06■□□□□ 0.16
USB1-201ENST00000219281 ZNF136P52737 540 aa16.06■□□□□ 0.16
USB1-201ENST00000219281 OR10A3P58181 314 aa16.06■□□□□ 0.16
USB1-201ENST00000219281 GPR68Q15743 365 aa16.06■□□□□ 0.16
USB1-201ENST00000219281 TJAP1Q5JTD0 557 aa16.06■□□□□ 0.16
USB1-201ENST00000219281 CCNJQ5T5M9 372 aa16.06■□□□□ 0.16
USB1-201ENST00000219281 CDC73Q6P1J9 531 aa16.06■□□□□ 0.16
USB1-201ENST00000219281 LRRC28Q86X40 367 aaPredicted RBP16.06■□□□□ 0.16
USB1-201ENST00000219281 OR4N5Q8IXE1 308 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms