RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 FAM240BA0A1B0GVZ2 78 aa12.23□□□□□ -0.45
CTNS-201ENST00000046640 SLC30A4O14863 429 aa12.23□□□□□ -0.45
CTNS-201ENST00000046640 HRO43593 1189 aa12.23□□□□□ -0.45
CTNS-201ENST00000046640 SCO2O43819 266 aa12.23□□□□□ -0.45
CTNS-201ENST00000046640 NT5EP21589 574 aa12.23□□□□□ -0.45
CTNS-201ENST00000046640 SMSP52788 366 aa12.23□□□□□ -0.45
CTNS-201ENST00000046640 CTBP2P56545 445 aa12.23□□□□□ -0.45
CTNS-201ENST00000046640 GPLD1P80108 840 aa12.23□□□□□ -0.45
CTNS-201ENST00000046640 MAPK14Q16539 360 aa12.23□□□□□ -0.45
CTNS-201ENST00000046640 PUS10Q3MIT2 529 aaKnown RBP12.23□□□□□ -0.45
CTNS-201ENST00000046640 LCN1P1Q5VSP4 162 aa12.23□□□□□ -0.45
CTNS-201ENST00000046640 SLC27A4Q6P1M0 643 aa12.23□□□□□ -0.45
CTNS-201ENST00000046640 HSDL2Q6YN16 418 aa12.23□□□□□ -0.45
CTNS-201ENST00000046640 FRRS1Q6ZNA5 592 aa12.23□□□□□ -0.45
CTNS-201ENST00000046640 BBS1Q8NFJ9 593 aa12.23□□□□□ -0.45
CTNS-201ENST00000046640 OR13H1Q8NG92 308 aa12.23□□□□□ -0.45
CTNS-201ENST00000046640 TBX5Q99593 518 aa12.23□□□□□ -0.45
CTNS-201ENST00000046640 EVA1BQ9NVM1 165 aa12.23□□□□□ -0.45
CTNS-201ENST00000046640 MSRAQ9UJ68 235 aa12.23□□□□□ -0.45
CTNS-201ENST00000046640 ALG5Q9Y673 324 aa12.23□□□□□ -0.45
CTNS-201ENST00000046640 FAM25AB3EWG3 89 aa12.23□□□□□ -0.45
CTNS-201ENST00000046640 FAM25CB3EWG5 89 aa12.23□□□□□ -0.45
CTNS-201ENST00000046640 FAM25GB3EWG6 89 aa12.23□□□□□ -0.45
CTNS-201ENST00000046640 H0YGG7 62 aa12.23□□□□□ -0.45
CTNS-201ENST00000046640 PEX12O00623 359 aa12.23□□□□□ -0.45
CTNS-201ENST00000046640 PPM1FP49593 454 aaPredicted RBP12.23□□□□□ -0.45
CTNS-201ENST00000046640 ARF3P61204 181 aaPredicted RBP12.23□□□□□ -0.45
CTNS-201ENST00000046640 SHC2P98077 582 aa12.23□□□□□ -0.45
CTNS-201ENST00000046640 CDK5Q00535 292 aa12.23□□□□□ -0.45
CTNS-201ENST00000046640 TNFRSF17Q02223 184 aa12.23□□□□□ -0.45
CTNS-201ENST00000046640 RNASE12Q5GAN4 147 aaKnown RBP12.23□□□□□ -0.45
CTNS-201ENST00000046640 GDPGP1Q6ZNW5 385 aa12.23□□□□□ -0.45
CTNS-201ENST00000046640 ASB18Q6ZVZ8 466 aa12.23□□□□□ -0.45
CTNS-201ENST00000046640 FLVCR1-AS1Q8TAF5 88 aa12.23□□□□□ -0.45
CTNS-201ENST00000046640 DIO2Q92813 273 aa12.23□□□□□ -0.45
CTNS-201ENST00000046640 RNF170Q96K19 258 aa12.23□□□□□ -0.45
CTNS-201ENST00000046640 CDCA3Q99618 268 aaPredicted RBP12.23□□□□□ -0.45
CTNS-201ENST00000046640 POLDIP3Q9BY77 421 aaKnown RBP12.23□□□□□ -0.45
CTNS-201ENST00000046640 S1PR5Q9H228 398 aa12.23□□□□□ -0.45
CTNS-201ENST00000046640 B3GAT2Q9NPZ5 323 aa12.23□□□□□ -0.45
CTNS-201ENST00000046640 HRASLS2Q9NWW9 162 aa12.23□□□□□ -0.45
CTNS-201ENST00000046640 DAPP1Q9UN19 280 aa12.23□□□□□ -0.45
CTNS-201ENST00000046640 SLCO1B1Q9Y6L6 691 aa12.23□□□□□ -0.45
CTNS-201ENST00000046640 CDC42EP2O14613 210 aa12.22□□□□□ -0.45
CTNS-201ENST00000046640 CASC3O15234 703 aaKnown RBP12.22□□□□□ -0.45
CTNS-201ENST00000046640 B3GALT2O43825 422 aa12.22□□□□□ -0.45
CTNS-201ENST00000046640 FGF17O60258 216 aa12.22□□□□□ -0.45
CTNS-201ENST00000046640 CDC123O75794 336 aaPredicted RBP12.22□□□□□ -0.45
CTNS-201ENST00000046640 IL1AP01583 271 aa12.22□□□□□ -0.45
CTNS-201ENST00000046640 CPEP16870 476 aa12.22□□□□□ -0.45
CTNS-201ENST00000046640 HNRNPA2B1P22626 353 aaKnown RBP12.22□□□□□ -0.45
CTNS-201ENST00000046640 ST3GAL3Q11203 375 aa12.22□□□□□ -0.45
CTNS-201ENST00000046640 COX10Q12887 443 aa12.22□□□□□ -0.45
CTNS-201ENST00000046640 ASAH1Q13510 395 aa12.22□□□□□ -0.45
CTNS-201ENST00000046640 SUZ12Q15022 739 aaKnown RBP12.22□□□□□ -0.45
CTNS-201ENST00000046640 TRAM2Q15035 370 aa12.22□□□□□ -0.45
CTNS-201ENST00000046640 IL20RBQ6UXL0 311 aa12.22□□□□□ -0.45
CTNS-201ENST00000046640 GDF7Q7Z4P5 450 aa12.22□□□□□ -0.45
CTNS-201ENST00000046640 MARCH9Q86YJ5 346 aa12.22□□□□□ -0.45
CTNS-201ENST00000046640 FAM26EQ8N5C1 309 aa12.22□□□□□ -0.45
CTNS-201ENST00000046640 ANKK1Q8NFD2 765 aa12.22□□□□□ -0.45
CTNS-201ENST00000046640 SCARF2Q96GP6 870 aaPredicted RBP12.22□□□□□ -0.45
CTNS-201ENST00000046640 KLHL28Q9NXS3 571 aa12.22□□□□□ -0.45
CTNS-201ENST00000046640 DIMT1Q9UNQ2 313 aaKnown RBP12.22□□□□□ -0.45
CTNS-201ENST00000046640 SHISA3A0PJX4 238 aa12.22□□□□□ -0.45
CTNS-201ENST00000046640 ZC3H12DA2A288 527 aaKnown RBP12.22□□□□□ -0.45
CTNS-201ENST00000046640 ACP2P11117 423 aa12.22□□□□□ -0.45
CTNS-201ENST00000046640 VSX2P58304 361 aaPredicted RBP12.22□□□□□ -0.45
CTNS-201ENST00000046640 EFR3AQ14156 821 aa12.22□□□□□ -0.45
CTNS-201ENST00000046640 TMEM201Q5SNT2 666 aa12.22□□□□□ -0.45
CTNS-201ENST00000046640 GHDCQ8N2G8 530 aa12.22□□□□□ -0.45
CTNS-201ENST00000046640 DEFB119Q8N690 84 aa12.22□□□□□ -0.45
CTNS-201ENST00000046640 OR4Q3Q8NH05 313 aa12.22□□□□□ -0.45
CTNS-201ENST00000046640 UFD1Q92890 307 aa12.22□□□□□ -0.45
CTNS-201ENST00000046640 SNAPC3Q92966 411 aa12.22□□□□□ -0.45
CTNS-201ENST00000046640 SLC41A3Q96GZ6 507 aa12.22□□□□□ -0.45
CTNS-201ENST00000046640 GALNT9Q9HCQ5 603 aa12.22□□□□□ -0.45
CTNS-201ENST00000046640 LYARQ9NX58 379 aaKnown RBP12.22□□□□□ -0.45
CTNS-201ENST00000046640 NDOR1Q9UHB4 597 aa12.22□□□□□ -0.45
CTNS-201ENST00000046640 CLEC4AQ9UMR7 237 aa12.22□□□□□ -0.45
CTNS-201ENST00000046640 SGK494L7N484 410 aa12.21□□□□□ -0.45
CTNS-201ENST00000046640 ERVH48-1M5A8F1 160 aa12.21□□□□□ -0.45
CTNS-201ENST00000046640 PLOD3O60568 738 aa12.21□□□□□ -0.45
CTNS-201ENST00000046640 KCNJ13O60928 360 aa12.21□□□□□ -0.45
CTNS-201ENST00000046640 ENDOUP21128 410 aaKnown RBP12.21□□□□□ -0.45
CTNS-201ENST00000046640 MAP2K3P46734 347 aa12.21□□□□□ -0.45
CTNS-201ENST00000046640 MTNR1AP48039 350 aa12.21□□□□□ -0.45
CTNS-201ENST00000046640 OCLNQ16625 522 aa12.21□□□□□ -0.45
CTNS-201ENST00000046640 BTBD16Q32M84 506 aa12.21□□□□□ -0.45
CTNS-201ENST00000046640 FCRLBQ6BAA4 426 aa12.21□□□□□ -0.45
CTNS-201ENST00000046640 CDC73Q6P1J9 531 aa12.21□□□□□ -0.45
CTNS-201ENST00000046640 ZNF836Q6ZNA1 936 aa12.21□□□□□ -0.45
CTNS-201ENST00000046640 RDH10Q8IZV5 341 aa12.21□□□□□ -0.45
CTNS-201ENST00000046640 PIGXQ8TBF5 258 aa12.21□□□□□ -0.45
CTNS-201ENST00000046640 RERGQ96A58 199 aaPredicted RBP12.21□□□□□ -0.45
CTNS-201ENST00000046640 WDFY2Q96P53 400 aa12.21□□□□□ -0.45
CTNS-201ENST00000046640 HDHD2Q9H0R4 259 aa12.21□□□□□ -0.45
CTNS-201ENST00000046640 MED20Q9H944 212 aa12.21□□□□□ -0.45
CTNS-201ENST00000046640 ZNF443Q9Y2A4 671 aaPredicted RBP12.21□□□□□ -0.45
CTNS-201ENST00000046640 GSTK1Q9Y2Q3 226 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms