RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 CD40LGP29965 261 aa11.27□□□□□ -0.61
CHPF2-201ENST00000035307 NSDHLQ15738 373 aa11.27□□□□□ -0.61
CHPF2-201ENST00000035307 TP53I3Q53FA7 332 aa11.27□□□□□ -0.61
CHPF2-201ENST00000035307 OTPQ5XKR4 325 aa11.27□□□□□ -0.61
CHPF2-201ENST00000035307 MSANTD1Q6ZTZ1 278 aa11.27□□□□□ -0.61
CHPF2-201ENST00000035307 RIMKLAQ8IXN7 391 aa11.27□□□□□ -0.61
CHPF2-201ENST00000035307 SLC7A5P1Q8MH63 180 aa11.27□□□□□ -0.61
CHPF2-201ENST00000035307 CHCHD4Q8N4Q1 142 aa11.27□□□□□ -0.61
CHPF2-201ENST00000035307 SDR9C7Q8NEX9 313 aa11.27□□□□□ -0.61
CHPF2-201ENST00000035307 METTL21AQ8WXB1 218 aa11.27□□□□□ -0.61
CHPF2-201ENST00000035307 MS4A8Q9BY19 250 aa11.27□□□□□ -0.61
CHPF2-201ENST00000035307 SLC22A4Q9H015 551 aa11.27□□□□□ -0.61
CHPF2-201ENST00000035307 TRIM36Q9NQ86 728 aa11.27□□□□□ -0.61
CHPF2-201ENST00000035307 NANSQ9NR45 359 aa11.27□□□□□ -0.61
CHPF2-201ENST00000035307 HSPB11Q9Y547 144 aa11.27□□□□□ -0.61
CHPF2-201ENST00000035307 PCDHGA6Q9Y5G7 932 aa11.27□□□□□ -0.61
CHPF2-201ENST00000035307 FAM47E-STBD1D6RA91 191 aa11.27□□□□□ -0.61
CHPF2-201ENST00000035307 CASC3O15234 703 aaKnown RBP11.27□□□□□ -0.61
CHPF2-201ENST00000035307 PRR35P0CG20 571 aa11.27□□□□□ -0.61
CHPF2-201ENST00000035307 CXCR1P25024 350 aa11.27□□□□□ -0.61
CHPF2-201ENST00000035307 PSMB10P40306 273 aa11.27□□□□□ -0.61
CHPF2-201ENST00000035307 SMU1Q2TAY7 513 aa11.27□□□□□ -0.61
CHPF2-201ENST00000035307 ZNF544Q6NX49 715 aa11.27□□□□□ -0.61
CHPF2-201ENST00000035307 SERPINA12Q8IW75 414 aa11.27□□□□□ -0.61
CHPF2-201ENST00000035307 KLHDC8BQ8IXV7 354 aa11.27□□□□□ -0.61
CHPF2-201ENST00000035307 RHBDD1Q8TEB9 315 aa11.27□□□□□ -0.61
CHPF2-201ENST00000035307 SEC61A2Q9H9S3 476 aa11.27□□□□□ -0.61
CHPF2-201ENST00000035307 PATJQ8NI35 1801 aa11.26□□□□□ -0.61
CHPF2-201ENST00000035307 ZC3H12DA2A288 527 aaKnown RBP11.26□□□□□ -0.61
CHPF2-201ENST00000035307 FCMRO60667 390 aa11.26□□□□□ -0.61
CHPF2-201ENST00000035307 DRD5P21918 477 aa11.26□□□□□ -0.61
CHPF2-201ENST00000035307 GBX2P52951 348 aaPredicted RBP11.26□□□□□ -0.61
CHPF2-201ENST00000035307 KIAA0040Q15053 153 aa11.26□□□□□ -0.61
CHPF2-201ENST00000035307 AKIRIN2Q53H80 203 aa11.26□□□□□ -0.61
CHPF2-201ENST00000035307 HDDC2Q7Z4H3 204 aa11.26□□□□□ -0.61
CHPF2-201ENST00000035307 ACBD7Q8N6N7 88 aa11.26□□□□□ -0.61
CHPF2-201ENST00000035307 NLGN4YQ8NFZ3 816 aaPredicted RBP11.26□□□□□ -0.61
CHPF2-201ENST00000035307 RMI1Q9H9A7 625 aa11.26□□□□□ -0.61
CHPF2-201ENST00000035307 FKBP7Q9Y680 259 aa11.26□□□□□ -0.61
CHPF2-201ENST00000035307 SCDO00767 359 aa11.26□□□□□ -0.61
CHPF2-201ENST00000035307 ANKRD28O15084 1053 aa11.26□□□□□ -0.61
CHPF2-201ENST00000035307 LRIF1Q5T3J3 769 aa11.26□□□□□ -0.61
CHPF2-201ENST00000035307 KDM4DQ6B0I6 523 aa11.26□□□□□ -0.61
CHPF2-201ENST00000035307 CDH24Q86UP0 819 aa11.26□□□□□ -0.61
CHPF2-201ENST00000035307 OR10H5Q8NGA6 315 aa11.26□□□□□ -0.61
CHPF2-201ENST00000035307 KLF15Q9UIH9 416 aa11.26□□□□□ -0.61
CHPF2-201ENST00000035307 BOLA1Q9Y3E2 137 aa11.26□□□□□ -0.61
CHPF2-201ENST00000035307 MAOAP21397 527 aa11.26□□□□□ -0.61
CHPF2-201ENST00000035307 ATP5A1P25705 553 aaKnown RBP11.26□□□□□ -0.61
CHPF2-201ENST00000035307 RPS15AP62244 130 aaKnown RBP11.26□□□□□ -0.61
CHPF2-201ENST00000035307 ENTPD8Q5MY95 495 aa11.26□□□□□ -0.61
CHPF2-201ENST00000035307 FAM71E1Q6IPT2 247 aa11.26□□□□□ -0.61
CHPF2-201ENST00000035307 GALNTL5Q7Z4T8 443 aa11.26□□□□□ -0.61
CHPF2-201ENST00000035307 SYT14Q8NB59 555 aa11.26□□□□□ -0.61
CHPF2-201ENST00000035307 OR2L8Q8NGY9 312 aa11.26□□□□□ -0.61
CHPF2-201ENST00000035307 RIT1Q92963 219 aa11.26□□□□□ -0.61
CHPF2-201ENST00000035307 GINS4Q9BRT9 223 aa11.26□□□□□ -0.61
CHPF2-201ENST00000035307 PDCD10Q9BUL8 212 aa11.26□□□□□ -0.61
CHPF2-201ENST00000035307 ACTRT3Q9BYD9 372 aa11.26□□□□□ -0.61
CHPF2-201ENST00000035307 ALOXE3Q9BYJ1 711 aa11.26□□□□□ -0.61
CHPF2-201ENST00000035307 KIR3DX1Q9H7L2 352 aa11.26□□□□□ -0.61
CHPF2-201ENST00000035307 AKAP7Q9P0M2 348 aaPredicted RBP11.26□□□□□ -0.61
CHPF2-201ENST00000035307 KLHL42Q9P2K6 505 aa11.26□□□□□ -0.61
CHPF2-201ENST00000035307 COPS7AQ9UBW8 275 aa11.26□□□□□ -0.61
CHPF2-201ENST00000035307 SERTAD3Q9UJW9 196 aa11.26□□□□□ -0.61
CHPF2-201ENST00000035307 UNC119BA6NIH7 251 aa11.26□□□□□ -0.61
CHPF2-201ENST00000035307 ITGAMP11215 1152 aa11.26□□□□□ -0.61
CHPF2-201ENST00000035307 CPMP14384 443 aa11.26□□□□□ -0.61
CHPF2-201ENST00000035307 AFF3P51826 1226 aaKnown RBP11.26□□□□□ -0.61
CHPF2-201ENST00000035307 KCNJ10P78508 379 aa11.26□□□□□ -0.61
CHPF2-201ENST00000035307 GAS6Q14393 721 aa11.26□□□□□ -0.61
CHPF2-201ENST00000035307 LAX1Q8IWV1 398 aa11.26□□□□□ -0.61
CHPF2-201ENST00000035307 NATD1Q8N6N6 113 aa11.26□□□□□ -0.61
CHPF2-201ENST00000035307 MR1Q95460 341 aa11.26□□□□□ -0.61
CHPF2-201ENST00000035307 ZDHHC12Q96GR4 267 aa11.26□□□□□ -0.61
CHPF2-201ENST00000035307 GPER1Q99527 375 aa11.26□□□□□ -0.61
CHPF2-201ENST00000035307 ZNF559Q9BR84 538 aa11.26□□□□□ -0.61
CHPF2-201ENST00000035307 LRRC61Q9BV99 259 aa11.26□□□□□ -0.61
CHPF2-201ENST00000035307 NUFIP1Q9UHK0 495 aaKnown RBP11.26□□□□□ -0.61
CHPF2-201ENST00000035307 ERVK-19Q9WJR5 959 aa11.26□□□□□ -0.61
CHPF2-201ENST00000035307 MRPS2Q9Y399 296 aaKnown RBP11.26□□□□□ -0.61
CHPF2-201ENST00000035307 DUX1O43812 170 aa11.25□□□□□ -0.61
CHPF2-201ENST00000035307 DOK2O60496 412 aa11.25□□□□□ -0.61
CHPF2-201ENST00000035307 CTSVO60911 334 aa11.25□□□□□ -0.61
CHPF2-201ENST00000035307 CHRNB1P11230 501 aa11.25□□□□□ -0.61
CHPF2-201ENST00000035307 DMWDQ09019 674 aa11.25□□□□□ -0.61
CHPF2-201ENST00000035307 TMEM35AQ53FP2 167 aa11.25□□□□□ -0.61
CHPF2-201ENST00000035307 UBE2UQ5VVX9 321 aa11.25□□□□□ -0.61
CHPF2-201ENST00000035307 IKBIPQ70UQ0 350 aa11.25□□□□□ -0.61
CHPF2-201ENST00000035307 SLC37A3Q8NCC5 494 aa11.25□□□□□ -0.61
CHPF2-201ENST00000035307 AMDHD1Q96NU7 426 aa11.25□□□□□ -0.61
CHPF2-201ENST00000035307 B3GNT4Q9C0J1 378 aa11.25□□□□□ -0.61
CHPF2-201ENST00000035307 TMEM185BQ9H7F4 350 aa11.25□□□□□ -0.61
CHPF2-201ENST00000035307 FBRSQ9HAH7 460 aa11.25□□□□□ -0.61
CHPF2-201ENST00000035307 TRPV4Q9HBA0 871 aa11.25□□□□□ -0.61
CHPF2-201ENST00000035307 SLC6A20Q9NP91 592 aa11.25□□□□□ -0.61
CHPF2-201ENST00000035307 PAQR5Q9NXK6 330 aaPredicted RBP11.25□□□□□ -0.61
CHPF2-201ENST00000035307 ICE1Q9Y2F5 2266 aa11.25□□□□□ -0.61
CHPF2-201ENST00000035307 A0A1W2PR48 441 aa11.25□□□□□ -0.61
CHPF2-201ENST00000035307 OR5K4A6NMS3 321 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms