RNA–Protein interactions for RNA: ENST00000640313.1

VPS35-212, Transcript of VPS35, retromer complex component, humanhuman

TSL 5 BASIC

Gene VPS35, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35-212ENST00000640313 TESK2Q96S53 571 aa0.21□□□□□ -2.38
VPS35-212ENST00000640313 TSPAN18Q96SJ8 248 aa0.21□□□□□ -2.38
VPS35-212ENST00000640313 ATP6V0BQ99437 205 aa0.21□□□□□ -2.38
VPS35-212ENST00000640313 TXN2Q99757 166 aa0.21□□□□□ -2.38
VPS35-212ENST00000640313 KLHDC3Q9BQ90 382 aa0.21□□□□□ -2.38
VPS35-212ENST00000640313 CBWD1Q9BRT8 395 aa0.21□□□□□ -2.38
VPS35-212ENST00000640313 FAM213AQ9BRX8 229 aa0.21□□□□□ -2.38
VPS35-212ENST00000640313 NICN1Q9BSH3 213 aa0.21□□□□□ -2.38
VPS35-212ENST00000640313 DESI2Q9BSY9 194 aa0.21□□□□□ -2.38
VPS35-212ENST00000640313 NDUFAF3Q9BU61 184 aa0.21□□□□□ -2.38
VPS35-212ENST00000640313 CARD6Q9BX69 1037 aa0.21□□□□□ -2.38
VPS35-212ENST00000640313 TBC1D10AQ9BXI6 508 aa0.21□□□□□ -2.38
VPS35-212ENST00000640313 SLC17A9Q9BYT1 436 aa0.21□□□□□ -2.38
VPS35-212ENST00000640313 SLC5A7Q9GZV3 580 aa0.21□□□□□ -2.38
VPS35-212ENST00000640313 GLT8D2Q9H1C3 349 aa0.21□□□□□ -2.38
VPS35-212ENST00000640313 TRPV6Q9H1D0 765 aa0.21□□□□□ -2.38
VPS35-212ENST00000640313 ABCG8Q9H221 673 aa0.21□□□□□ -2.38
VPS35-212ENST00000640313 PNNQ9H307 717 aaKnown RBP0.21□□□□□ -2.38
VPS35-212ENST00000640313 FAM124BQ9H5Z6 455 aaPredicted RBP0.21□□□□□ -2.38
VPS35-212ENST00000640313 ZDHHC11Q9H8X9 412 aa0.21□□□□□ -2.38
VPS35-212ENST00000640313 ZWILCHQ9H900 591 aa0.21□□□□□ -2.38
VPS35-212ENST00000640313 AKIRIN1Q9H9L7 192 aaPredicted RBP0.21□□□□□ -2.38
VPS35-212ENST00000640313 CAB39LQ9H9S4 337 aa0.21□□□□□ -2.38
VPS35-212ENST00000640313 PATZ1Q9HBE1 687 aaKnown RBP0.21□□□□□ -2.38
VPS35-212ENST00000640313 ZCCHC3Q9NUD5 404 aaKnown RBP0.21□□□□□ -2.38
VPS35-212ENST00000640313 NECAP2Q9NVZ3 263 aa0.21□□□□□ -2.38
VPS35-212ENST00000640313 DUS2Q9NX74 493 aaKnown RBP0.21□□□□□ -2.38
VPS35-212ENST00000640313 ELOVL2Q9NXB9 296 aa0.21□□□□□ -2.38
VPS35-212ENST00000640313 B3GNT2Q9NY97 397 aa0.21□□□□□ -2.38
VPS35-212ENST00000640313 RBAKQ9NYW8 714 aaPredicted RBP0.21□□□□□ -2.38
VPS35-212ENST00000640313 AKAP7Q9P0M2 348 aaPredicted RBP0.21□□□□□ -2.38
VPS35-212ENST00000640313 C6orf203Q9P0P8 240 aaPredicted RBP0.21□□□□□ -2.38
VPS35-212ENST00000640313 VPS54Q9P1Q0 977 aa0.21□□□□□ -2.38
VPS35-212ENST00000640313 OR1A1Q9P1Q5 309 aa0.21□□□□□ -2.38
VPS35-212ENST00000640313 WRAP73Q9P2S5 460 aaPredicted RBP0.21□□□□□ -2.38
VPS35-212ENST00000640313 TRIM10Q9UDY6 481 aa0.21□□□□□ -2.38
VPS35-212ENST00000640313 IL20RAQ9UHF4 553 aa0.21□□□□□ -2.38
VPS35-212ENST00000640313 CYTH4Q9UIA0 394 aa0.21□□□□□ -2.38
VPS35-212ENST00000640313 ZNF225Q9UK10 706 aa0.21□□□□□ -2.38
VPS35-212ENST00000640313 APPL1Q9UKG1 709 aa0.21□□□□□ -2.38
VPS35-212ENST00000640313 FBXW2Q9UKT8 454 aa0.21□□□□□ -2.38
VPS35-212ENST00000640313 ANGPTL2Q9UKU9 493 aa0.21□□□□□ -2.38
VPS35-212ENST00000640313 NAP1L2Q9ULW6 460 aaPredicted RBP0.21□□□□□ -2.38
VPS35-212ENST00000640313 STX8Q9UNK0 236 aa0.21□□□□□ -2.38
VPS35-212ENST00000640313 SAMD4AQ9UPU9 718 aaKnown RBP0.21□□□□□ -2.38
VPS35-212ENST00000640313 PSG11Q9UQ72 335 aa0.21□□□□□ -2.38
VPS35-212ENST00000640313 DHRS7Q9Y394 339 aa0.21□□□□□ -2.38
VPS35-212ENST00000640313 PPIAL4AQ9Y536 164 aa0.21□□□□□ -2.38
VPS35-212ENST00000640313 CDH10Q9Y6N8 788 aa0.21□□□□□ -2.38
VPS35-212ENST00000640313 ARHGAP21Q5T5U3 1957 aa0.21□□□□□ -2.38
VPS35-212ENST00000640313 USP6P35125 1406 aa0.21□□□□□ -2.38
VPS35-212ENST00000640313 PARD3Q8TEW0 1356 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 PLEKHG1Q9ULL1 1385 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 IGLV3-16A0A075B6K0 115 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 A0A096LNJ9 63 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 TRBV6-6A0A0A6YYG2 114 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 A0A0G2JRQ6 117 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 A0A0J9YVX5 310 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 TRBV2A0A0J9YWF9 115 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 A0A0J9YXY3 114 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 HSFX4A0A1B0GTS1 333 aaPredicted RBP0.2□□□□□ -2.38
VPS35-212ENST00000640313 A0A1B0GUA9 196 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 A0A1B0GWB2 263 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 HSFX3A0A1B0GWH4 333 aaPredicted RBP0.2□□□□□ -2.38
VPS35-212ENST00000640313 TTC26A0AVF1 554 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 MACROD2A1Z1Q3 448 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 LRRD1A4D1F6 860 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 DHRS7CA6NNS2 312 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 WASHC1A8K0Z3 465 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 COLCA2A8K830 154 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 FAM166BA8MTA8 275 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 A8MUA0 341 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 WASH3PC4AMC7 463 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 TRIM49D1C9J1S8 452 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 E9PLD3 99 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 PDXKO00764 312 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 ABCD4O14678 606 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 PSMA7O14818 248 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 RIPK2O43353 540 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 PPIHO43447 177 aaKnown RBP0.2□□□□□ -2.38
VPS35-212ENST00000640313 LANCL1O43813 399 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 ZBTB14O43829 449 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 FAM189A1O60320 539 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 TPST2O60704 377 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 TBL1XO60907 577 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 GMNNO75496 209 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 B3GAT3O94766 335 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 MMP1P03956 469 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 OPN1LWP04000 364 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 PCCAP05165 728 aaPredicted RBP0.2□□□□□ -2.38
VPS35-212ENST00000640313 IGHV4-34P06331 123 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 PGK2P07205 417 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 IGFBP1P08833 259 aaPredicted RBP0.2□□□□□ -2.38
VPS35-212ENST00000640313 HIST1H2AGP0C0S8 130 aaPredicted RBP0.2□□□□□ -2.38
VPS35-212ENST00000640313 OR8U8P0C7N1 319 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 PDHBP11177 359 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 BCKDHAP12694 445 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 CPA3P15088 417 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 GNSP15586 552 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 ZNF823P16415 610 aa0.2□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms