RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 IDNKQ5T6J7 187 aa18.76■□□□□ 0.59
SYNGAP1-227ENST00000638142 CDC73Q6P1J9 531 aa18.76■□□□□ 0.59
SYNGAP1-227ENST00000638142 FRRS1Q6ZNA5 592 aa18.76■□□□□ 0.59
SYNGAP1-227ENST00000638142 ELMOD2Q8IZ81 293 aa18.76■□□□□ 0.59
SYNGAP1-227ENST00000638142 OR4M2Q8NGB6 313 aa18.76■□□□□ 0.59
SYNGAP1-227ENST00000638142 BRIX1Q8TDN6 353 aaKnown RBP18.76■□□□□ 0.59
SYNGAP1-227ENST00000638142 SLC35A4Q96G79 324 aa18.76■□□□□ 0.59
SYNGAP1-227ENST00000638142 HDHD2Q9H0R4 259 aa18.76■□□□□ 0.59
SYNGAP1-227ENST00000638142 FN3KQ9H479 309 aa18.76■□□□□ 0.59
SYNGAP1-227ENST00000638142 ISG20L2Q9H9L3 353 aaKnown RBP18.76■□□□□ 0.59
SYNGAP1-227ENST00000638142 CACYBPQ9HB71 228 aaKnown RBP18.76■□□□□ 0.59
SYNGAP1-227ENST00000638142 IL20RAQ9UHF4 553 aa18.76■□□□□ 0.59
SYNGAP1-227ENST00000638142 C12orf71A8MTZ7 269 aa18.76■□□□□ 0.59
SYNGAP1-227ENST00000638142 CDC42EP2O14613 210 aa18.76■□□□□ 0.59
SYNGAP1-227ENST00000638142 PRICKLE3O43900 615 aaPredicted RBP18.76■□□□□ 0.59
SYNGAP1-227ENST00000638142 AGR2O95994 175 aa18.76■□□□□ 0.59
SYNGAP1-227ENST00000638142 TIMP1P01033 207 aa18.76■□□□□ 0.59
SYNGAP1-227ENST00000638142 VIPR2P41587 438 aa18.76■□□□□ 0.59
SYNGAP1-227ENST00000638142 MRPL28Q13084 256 aaKnown RBP18.76■□□□□ 0.59
SYNGAP1-227ENST00000638142 KRT33BQ14525 404 aa18.76■□□□□ 0.59
SYNGAP1-227ENST00000638142 PUS10Q3MIT2 529 aaKnown RBP18.76■□□□□ 0.59
SYNGAP1-227ENST00000638142 NR2C2APQ86WQ0 139 aa18.76■□□□□ 0.59
SYNGAP1-227ENST00000638142 NRROSQ86YC3 692 aa18.76■□□□□ 0.59
SYNGAP1-227ENST00000638142 OR2L3Q8NG85 312 aa18.76■□□□□ 0.59
SYNGAP1-227ENST00000638142 KAT2AQ92830 837 aa18.76■□□□□ 0.59
SYNGAP1-227ENST00000638142 GFM1Q96RP9 751 aaKnown RBP18.76■□□□□ 0.59
SYNGAP1-227ENST00000638142 ALG8Q9BVK2 526 aa18.76■□□□□ 0.59
SYNGAP1-227ENST00000638142 MTHFD2LQ9H903 347 aaPredicted RBP18.76■□□□□ 0.59
SYNGAP1-227ENST00000638142 FOLH1BQ9HBA9 442 aa18.76■□□□□ 0.59
SYNGAP1-227ENST00000638142 PRSS16Q9NQE7 514 aa18.76■□□□□ 0.59
SYNGAP1-227ENST00000638142 LYARQ9NX58 379 aaKnown RBP18.76■□□□□ 0.59
SYNGAP1-227ENST00000638142 ZFR2Q9UPR6 939 aaKnown RBP18.76■□□□□ 0.59
SYNGAP1-227ENST00000638142 OR1A2Q9Y585 309 aa18.76■□□□□ 0.59
SYNGAP1-227ENST00000638142 ANTXRLA6NF34 631 aa18.75■□□□□ 0.59
SYNGAP1-227ENST00000638142 F8A1P23610 371 aa18.75■□□□□ 0.59
SYNGAP1-227ENST00000638142 RAB8AP61006 207 aa18.75■□□□□ 0.59
SYNGAP1-227ENST00000638142 NIPAL3Q6P499 406 aa18.75■□□□□ 0.59
SYNGAP1-227ENST00000638142 TIMM29Q9BSF4 260 aa18.75■□□□□ 0.59
SYNGAP1-227ENST00000638142 C1QTNF2Q9BXJ5 285 aa18.75■□□□□ 0.59
SYNGAP1-227ENST00000638142 SLC28A3Q9HAS3 691 aa18.75■□□□□ 0.59
SYNGAP1-227ENST00000638142 GALNT9Q9HCQ5 603 aa18.75■□□□□ 0.59
SYNGAP1-227ENST00000638142 MBNL1Q9NR56 388 aaKnown RBP18.75■□□□□ 0.59
SYNGAP1-227ENST00000638142 SLC7A7Q9UM01 511 aa18.75■□□□□ 0.59
SYNGAP1-227ENST00000638142 OTOL1A6NHN0 477 aaPredicted RBP18.75■□□□□ 0.59
SYNGAP1-227ENST00000638142 FAM183AA6NL82 134 aa18.75■□□□□ 0.59
SYNGAP1-227ENST00000638142 HK1P19367 917 aa18.75■□□□□ 0.59
SYNGAP1-227ENST00000638142 CD53P19397 219 aa18.75■□□□□ 0.59
SYNGAP1-227ENST00000638142 STXBP1P61764 594 aaKnown RBP18.75■□□□□ 0.59
SYNGAP1-227ENST00000638142 GPR176Q14439 515 aa18.75■□□□□ 0.59
SYNGAP1-227ENST00000638142 LTB4RQ15722 352 aa18.75■□□□□ 0.59
SYNGAP1-227ENST00000638142 PLBD1Q6P4A8 553 aa18.75■□□□□ 0.59
SYNGAP1-227ENST00000638142 MEPCEQ7L2J0 689 aaKnown RBP18.75■□□□□ 0.59
SYNGAP1-227ENST00000638142 CCDC28AQ8IWP9 274 aa18.75■□□□□ 0.59
SYNGAP1-227ENST00000638142 FBXL6Q8N531 539 aa18.75■□□□□ 0.59
SYNGAP1-227ENST00000638142 SLC37A3Q8NCC5 494 aa18.75■□□□□ 0.59
SYNGAP1-227ENST00000638142 OR52E1Q8NGJ3 308 aa18.75■□□□□ 0.59
SYNGAP1-227ENST00000638142 POF1BQ8WVV4 589 aa18.75■□□□□ 0.59
SYNGAP1-227ENST00000638142 MS4A4EQ96PG1 132 aa18.75■□□□□ 0.59
SYNGAP1-227ENST00000638142 TRIM36Q9NQ86 728 aa18.75■□□□□ 0.59
SYNGAP1-227ENST00000638142 APOBEC3BQ9UH17 382 aaKnown RBP18.75■□□□□ 0.59
SYNGAP1-227ENST00000638142 HSPB11Q9Y547 144 aa18.75■□□□□ 0.59
SYNGAP1-227ENST00000638142 DVL2O14641 736 aa18.74■□□□□ 0.59
SYNGAP1-227ENST00000638142 PCDH8O95206 1070 aa18.74■□□□□ 0.59
SYNGAP1-227ENST00000638142 RBMS1P29558 406 aaKnown RBP18.74■□□□□ 0.59
SYNGAP1-227ENST00000638142 HOXD11P31277 338 aaPredicted RBP18.74■□□□□ 0.59
SYNGAP1-227ENST00000638142 RFX3P48380 749 aa18.74■□□□□ 0.59
SYNGAP1-227ENST00000638142 AGFG1P52594 562 aaKnown RBP18.74■□□□□ 0.59
SYNGAP1-227ENST00000638142 SNRPD2P62316 118 aaKnown RBP18.74■□□□□ 0.59
SYNGAP1-227ENST00000638142 SHC2P98077 582 aa18.74■□□□□ 0.59
SYNGAP1-227ENST00000638142 MFSD12Q6NUT3 480 aa18.74■□□□□ 0.59
SYNGAP1-227ENST00000638142 MFSD9Q8NBP5 474 aa18.74■□□□□ 0.59
SYNGAP1-227ENST00000638142 RFT1Q96AA3 541 aa18.74■□□□□ 0.59
SYNGAP1-227ENST00000638142 HYLS1Q96M11 299 aa18.74■□□□□ 0.59
SYNGAP1-227ENST00000638142 NECTIN4Q96NY8 510 aa18.74■□□□□ 0.59
SYNGAP1-227ENST00000638142 TRPM6Q9BX84 2022 aa18.74■□□□□ 0.59
SYNGAP1-227ENST00000638142 NTMQ9P121 344 aa18.74■□□□□ 0.59
SYNGAP1-227ENST00000638142 KCNK6Q9Y257 313 aa18.74■□□□□ 0.59
SYNGAP1-227ENST00000638142 RFXAPO00287 272 aa18.74■□□□□ 0.59
SYNGAP1-227ENST00000638142 ZGLP1P0C6A0 271 aa18.74■□□□□ 0.59
SYNGAP1-227ENST00000638142 TEAD1P28347 426 aa18.74■□□□□ 0.59
SYNGAP1-227ENST00000638142 DRD3P35462 400 aa18.74■□□□□ 0.59
SYNGAP1-227ENST00000638142 CCDC85BQ15834 202 aaPredicted RBP18.74■□□□□ 0.59
SYNGAP1-227ENST00000638142 SLC16A11Q8NCK7 471 aa18.74■□□□□ 0.59
SYNGAP1-227ENST00000638142 OR52L1Q8NGH7 329 aa18.74■□□□□ 0.59
SYNGAP1-227ENST00000638142 AHCYL2Q96HN2 611 aaKnown RBP18.74■□□□□ 0.59
SYNGAP1-227ENST00000638142 OR52D1Q9H346 318 aa18.74■□□□□ 0.59
SYNGAP1-227ENST00000638142 INPP5EQ9NRR6 644 aa18.74■□□□□ 0.59
SYNGAP1-227ENST00000638142 SIRT4Q9Y6E7 314 aaPredicted RBP18.74■□□□□ 0.59
SYNGAP1-227ENST00000638142 TBC1D3KA0A087X1G2 549 aa18.73■□□□□ 0.59
SYNGAP1-227ENST00000638142 TBC1D3BA6NDS4 549 aa18.73■□□□□ 0.59
SYNGAP1-227ENST00000638142 TBC1D3FA6NER0 549 aaPredicted RBP18.73■□□□□ 0.59
SYNGAP1-227ENST00000638142 UNC119BA6NIH7 251 aa18.73■□□□□ 0.59
SYNGAP1-227ENST00000638142 LATO43561 262 aa18.73■□□□□ 0.59
SYNGAP1-227ENST00000638142 PLOD3O60568 738 aa18.73■□□□□ 0.59
SYNGAP1-227ENST00000638142 NOS1APO75052 506 aaPredicted RBP18.73■□□□□ 0.59
SYNGAP1-227ENST00000638142 ASGR2P07307 311 aa18.73■□□□□ 0.59
SYNGAP1-227ENST00000638142 EVI2BP34910 448 aa18.73■□□□□ 0.59
SYNGAP1-227ENST00000638142 AGERQ15109 404 aa18.73■□□□□ 0.59
SYNGAP1-227ENST00000638142 TRAM1Q15629 374 aa18.73■□□□□ 0.59
SYNGAP1-227ENST00000638142 PLA1AQ53H76 456 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms