RNA–Protein interactions for RNA: ENST00000636958.1

ARID1A-215, Transcript of AT-rich interaction domain 1A, human

TSL 5

Gene ARID1A, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARID1A-215	ENST00000636958	EIF4E1B	A6NMX2	242 aa	Known RBP	13.6	□□□□□ -0.23
ARID1A-215	ENST00000636958		B2RBV5	119 aa		13.6	□□□□□ -0.23
ARID1A-215	ENST00000636958	HNRNPCL2	B2RXH8	293 aa		13.6	□□□□□ -0.23
ARID1A-215	ENST00000636958	HNRNPCL3	B7ZW38	293 aa		13.6	□□□□□ -0.23
ARID1A-215	ENST00000636958	GNB5	O14775	395 aa		13.6	□□□□□ -0.23
ARID1A-215	ENST00000636958	NDUFB5	O43674	189 aa		13.6	□□□□□ -0.23
ARID1A-215	ENST00000636958	HNRNPCL1	O60812	293 aa	Known RBP	13.6	□□□□□ -0.23
ARID1A-215	ENST00000636958	ANGPTL1	O95841	491 aa		13.6	□□□□□ -0.23
ARID1A-215	ENST00000636958	PRB1	P04280	392 aa		13.6	□□□□□ -0.23
ARID1A-215	ENST00000636958	HNRNPCL4	P0DMR1	293 aa		13.6	□□□□□ -0.23
ARID1A-215	ENST00000636958	RFC3	P40938	356 aa		13.6	□□□□□ -0.23
ARID1A-215	ENST00000636958	SLC25A3	Q00325	362 aa		13.6	□□□□□ -0.23
ARID1A-215	ENST00000636958	KLHL26	Q53HC5	615 aa		13.6	□□□□□ -0.23
ARID1A-215	ENST00000636958	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	13.6	□□□□□ -0.23
ARID1A-215	ENST00000636958	PDZK1	Q5T2W1	519 aa		13.6	□□□□□ -0.23
ARID1A-215	ENST00000636958	FNDC7	Q5VTL7	733 aa		13.6	□□□□□ -0.23
ARID1A-215	ENST00000636958	REEP3	Q6NUK4	255 aa		13.6	□□□□□ -0.23
ARID1A-215	ENST00000636958	FAM180A	Q6UWF9	173 aa		13.6	□□□□□ -0.23
ARID1A-215	ENST00000636958	C16orf89	Q6UX73	402 aa		13.6	□□□□□ -0.23
ARID1A-215	ENST00000636958	CALHM3	Q86XJ0	350 aa		13.6	□□□□□ -0.23
ARID1A-215	ENST00000636958	ZZZ3	Q8IYH5	903 aa		13.6	□□□□□ -0.23
ARID1A-215	ENST00000636958	PGAM4	Q8N0Y7	254 aa		13.6	□□□□□ -0.23
ARID1A-215	ENST00000636958	CISD2	Q8N5K1	135 aa	Known RBP	13.6	□□□□□ -0.23
ARID1A-215	ENST00000636958	HIPK4	Q8NE63	616 aa		13.6	□□□□□ -0.23
ARID1A-215	ENST00000636958	OR1J4	Q8NGS1	313 aa		13.6	□□□□□ -0.23
ARID1A-215	ENST00000636958	FBXO27	Q8NI29	283 aa		13.6	□□□□□ -0.23
ARID1A-215	ENST00000636958	BBS10	Q8TAM1	723 aa		13.6	□□□□□ -0.23
ARID1A-215	ENST00000636958	OIT3	Q8WWZ8	545 aa		13.6	□□□□□ -0.23
ARID1A-215	ENST00000636958	ZG16B	Q96DA0	208 aa		13.6	□□□□□ -0.23
ARID1A-215	ENST00000636958	ZNF583	Q96ND8	569 aa		13.6	□□□□□ -0.23
ARID1A-215	ENST00000636958	TTTY12	Q9BZ98	90 aa		13.6	□□□□□ -0.23
ARID1A-215	ENST00000636958	QRSL1	Q9H0R6	528 aa	Known RBP	13.6	□□□□□ -0.23
ARID1A-215	ENST00000636958	BCL2L10	Q9HD36	194 aa		13.6	□□□□□ -0.23
ARID1A-215	ENST00000636958	ZFP64	Q9NPA5	681 aa		13.6	□□□□□ -0.23
ARID1A-215	ENST00000636958	SPAG4	Q9NPE6	437 aa		13.6	□□□□□ -0.23
ARID1A-215	ENST00000636958	PPP4R1L	Q9P1A2	415 aa		13.6	□□□□□ -0.23
ARID1A-215	ENST00000636958	SUCO	Q9UBS9	1254 aa	Known RBP	13.6	□□□□□ -0.23
ARID1A-215	ENST00000636958	FAM208B	Q5VWN6	2430 aa		13.6	□□□□□ -0.23
ARID1A-215	ENST00000636958	DSPP	Q9NZW4	1301 aa		13.6	□□□□□ -0.23
ARID1A-215	ENST00000636958	CENPVL1	A0A0U1RR11	272 aa		13.59	□□□□□ -0.23
ARID1A-215	ENST00000636958	LRRC3C	A6NJW4	275 aa		13.59	□□□□□ -0.23
ARID1A-215	ENST00000636958	FAM220BP	B1ANY3	271 aa		13.59	□□□□□ -0.23
ARID1A-215	ENST00000636958		H3BNH8	94 aa		13.59	□□□□□ -0.23
ARID1A-215	ENST00000636958	ACOT7	O00154	380 aa		13.59	□□□□□ -0.23
ARID1A-215	ENST00000636958	NME4	O00746	187 aa		13.59	□□□□□ -0.23
ARID1A-215	ENST00000636958	ADAM10	O14672	748 aa		13.59	□□□□□ -0.23
ARID1A-215	ENST00000636958	SNPH	O15079	494 aa		13.59	□□□□□ -0.23
ARID1A-215	ENST00000636958	PGM3	O95394	542 aa		13.59	□□□□□ -0.23
ARID1A-215	ENST00000636958	CRYAB	P02511	175 aa	Known RBP	13.59	□□□□□ -0.23
ARID1A-215	ENST00000636958	ZNF24	P17028	368 aa		13.59	□□□□□ -0.23
ARID1A-215	ENST00000636958	ELAVL4	P26378	380 aa	Known RBP	13.59	□□□□□ -0.23
ARID1A-215	ENST00000636958	C17orf67	Q0P5P2	114 aa		13.59	□□□□□ -0.23
ARID1A-215	ENST00000636958	MAPK14	Q16539	360 aa		13.59	□□□□□ -0.23
ARID1A-215	ENST00000636958	VMAC	Q2NL98	169 aa		13.59	□□□□□ -0.23
ARID1A-215	ENST00000636958	TIGD3	Q6B0B8	471 aa		13.59	□□□□□ -0.23
ARID1A-215	ENST00000636958	OR5M10	Q6IEU7	315 aa		13.59	□□□□□ -0.23
ARID1A-215	ENST00000636958	ERICH5	Q6P6B1	374 aa		13.59	□□□□□ -0.23
ARID1A-215	ENST00000636958	SLC22A16	Q86VW1	577 aa		13.59	□□□□□ -0.23
ARID1A-215	ENST00000636958	MISP	Q8IVT2	679 aa		13.59	□□□□□ -0.23
ARID1A-215	ENST00000636958	PEX5L	Q8IYB4	626 aa		13.59	□□□□□ -0.23
ARID1A-215	ENST00000636958	WDSUB1	Q8N9V3	476 aa		13.59	□□□□□ -0.23
ARID1A-215	ENST00000636958	GATS	Q8NAP1	163 aa		13.59	□□□□□ -0.23
ARID1A-215	ENST00000636958	PHOSPHO1	Q8TCT1	267 aa		13.59	□□□□□ -0.23
ARID1A-215	ENST00000636958	DUSP19	Q8WTR2	217 aa		13.59	□□□□□ -0.23
ARID1A-215	ENST00000636958	SNRNP40	Q96DI7	357 aa	Known RBP	13.59	□□□□□ -0.23
ARID1A-215	ENST00000636958	REXO5	Q96IC2	774 aa	Known RBP	13.59	□□□□□ -0.23
ARID1A-215	ENST00000636958	HHATL	Q9HCP6	504 aa		13.59	□□□□□ -0.23
ARID1A-215	ENST00000636958	ABCD2	Q9UBJ2	740 aa		13.59	□□□□□ -0.23
ARID1A-215	ENST00000636958	RALY	Q9UKM9	306 aa	Known RBP	13.59	□□□□□ -0.23
ARID1A-215	ENST00000636958	ANGPT4	Q9Y264	503 aa		13.59	□□□□□ -0.23
ARID1A-215	ENST00000636958	SMG1	Q96Q15	3661 aa	Known RBP	13.59	□□□□□ -0.23
ARID1A-215	ENST00000636958	SERINC4	A6NH21	518 aa		13.58	□□□□□ -0.23
ARID1A-215	ENST00000636958	AGAP5	A6NIR3	686 aa		13.58	□□□□□ -0.23
ARID1A-215	ENST00000636958	C17orf51	A8MQB3	221 aa		13.58	□□□□□ -0.23
ARID1A-215	ENST00000636958	GLS	O94925	669 aa	Predicted RBP	13.58	□□□□□ -0.23
ARID1A-215	ENST00000636958	ETS2	P15036	469 aa		13.58	□□□□□ -0.23
ARID1A-215	ENST00000636958	IL7R	P16871	459 aa		13.58	□□□□□ -0.23
ARID1A-215	ENST00000636958	RPS4Y1	P22090	263 aa	Known RBP	13.58	□□□□□ -0.23
ARID1A-215	ENST00000636958	RNF144A	P50876	292 aa	Predicted RBP	13.58	□□□□□ -0.23
ARID1A-215	ENST00000636958	PPIA	P62937	165 aa	Known RBP	13.58	□□□□□ -0.23
ARID1A-215	ENST00000636958	ALDH6A1	Q02252	535 aa	Known RBP	13.58	□□□□□ -0.23
ARID1A-215	ENST00000636958	LIPE	Q05469	1076 aa		13.58	□□□□□ -0.23
ARID1A-215	ENST00000636958	FGFBP1	Q14512	234 aa		13.58	□□□□□ -0.23
ARID1A-215	ENST00000636958	CD226	Q15762	336 aa		13.58	□□□□□ -0.23
ARID1A-215	ENST00000636958	HYAL4	Q2M3T9	481 aa		13.58	□□□□□ -0.23
ARID1A-215	ENST00000636958	RNFT1	Q5M7Z0	435 aa		13.58	□□□□□ -0.23
ARID1A-215	ENST00000636958	HMGN2P46	Q86SG4	172 aa		13.58	□□□□□ -0.23
ARID1A-215	ENST00000636958	IFNE	Q86WN2	208 aa		13.58	□□□□□ -0.23
ARID1A-215	ENST00000636958	PLCZ1	Q86YW0	608 aa		13.58	□□□□□ -0.23
ARID1A-215	ENST00000636958	SLC30A8	Q8IWU4	369 aa		13.58	□□□□□ -0.23
ARID1A-215	ENST00000636958	DEFB107A	Q8IZN7	70 aa		13.58	□□□□□ -0.23
ARID1A-215	ENST00000636958	RBM15B	Q8NDT2	890 aa	Known RBP	13.58	□□□□□ -0.23
ARID1A-215	ENST00000636958	OR2T12	Q8NG77	320 aa		13.58	□□□□□ -0.23
ARID1A-215	ENST00000636958	FAR1	Q8WVX9	515 aa		13.58	□□□□□ -0.23
ARID1A-215	ENST00000636958	GNRHR2	Q96P88	292 aa		13.58	□□□□□ -0.23
ARID1A-215	ENST00000636958	ALG2	Q9H553	416 aa		13.58	□□□□□ -0.23
ARID1A-215	ENST00000636958	CACYBP	Q9HB71	228 aa	Known RBP	13.58	□□□□□ -0.23
ARID1A-215	ENST00000636958	AGPAT4	Q9NRZ5	378 aa		13.58	□□□□□ -0.23
ARID1A-215	ENST00000636958	ADA2	Q9NZK5	511 aa		13.58	□□□□□ -0.23
ARID1A-215	ENST00000636958	TMEM181	Q9P2C4	612 aa		13.58	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms