RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 TEKT2Q9UIF3 430 aa13.32□□□□□ -0.28
LINC00339-208ENST00000634934 ANAPC2Q9UJX6 822 aa13.32□□□□□ -0.28
LINC00339-208ENST00000634934 USP22Q9UPT9 525 aa13.32□□□□□ -0.28
LINC00339-208ENST00000634934 YARS2Q9Y2Z4 477 aaKnown RBP13.32□□□□□ -0.28
LINC00339-208ENST00000634934 ZFYVE26Q68DK2 2539 aa13.32□□□□□ -0.28
LINC00339-208ENST00000634934 IGSF10Q6WRI0 2623 aa13.31□□□□□ -0.28
LINC00339-208ENST00000634934 C5orf58C9J3I9 102 aa13.31□□□□□ -0.28
LINC00339-208ENST00000634934 TO15178 435 aa13.31□□□□□ -0.28
LINC00339-208ENST00000634934 REM1O75628 298 aa13.31□□□□□ -0.28
LINC00339-208ENST00000634934 KCNK2O95069 426 aa13.31□□□□□ -0.28
LINC00339-208ENST00000634934 BCHEP06276 602 aa13.31□□□□□ -0.28
LINC00339-208ENST00000634934 ATP6V1B1P15313 513 aa13.31□□□□□ -0.28
LINC00339-208ENST00000634934 ABCD3P28288 659 aa13.31□□□□□ -0.28
LINC00339-208ENST00000634934 PIGAP37287 484 aa13.31□□□□□ -0.28
LINC00339-208ENST00000634934 CAPGP40121 348 aa13.31□□□□□ -0.28
LINC00339-208ENST00000634934 GZMMP51124 257 aa13.31□□□□□ -0.28
LINC00339-208ENST00000634934 SOX8P57073 446 aa13.31□□□□□ -0.28
LINC00339-208ENST00000634934 HPCAP84074 193 aa13.31□□□□□ -0.28
LINC00339-208ENST00000634934 EPS8Q12929 822 aa13.31□□□□□ -0.28
LINC00339-208ENST00000634934 DCTN2Q13561 401 aaKnown RBP13.31□□□□□ -0.28
LINC00339-208ENST00000634934 SYPL1Q16563 259 aa13.31□□□□□ -0.28
LINC00339-208ENST00000634934 MEP1AQ16819 746 aa13.31□□□□□ -0.28
LINC00339-208ENST00000634934 ACER2Q5QJU3 275 aa13.31□□□□□ -0.28
LINC00339-208ENST00000634934 DCST2Q5T1A1 773 aa13.31□□□□□ -0.28
LINC00339-208ENST00000634934 ABHD17BQ5VST6 288 aa13.31□□□□□ -0.28
LINC00339-208ENST00000634934 CYP2R1Q6VVX0 501 aa13.31□□□□□ -0.28
LINC00339-208ENST00000634934 OLIG3Q7RTU3 272 aa13.31□□□□□ -0.28
LINC00339-208ENST00000634934 PTOV1Q86YD1 416 aa13.31□□□□□ -0.28
LINC00339-208ENST00000634934 ZZZ3Q8IYH5 903 aa13.31□□□□□ -0.28
LINC00339-208ENST00000634934 SLC34A3Q8N130 599 aa13.31□□□□□ -0.28
LINC00339-208ENST00000634934 CBR4Q8N4T8 237 aa13.31□□□□□ -0.28
LINC00339-208ENST00000634934 BCORP1Q8N888 145 aa13.31□□□□□ -0.28
LINC00339-208ENST00000634934 C11orf65Q8NCR3 313 aa13.31□□□□□ -0.28
LINC00339-208ENST00000634934 NFKBIDQ8NI38 313 aa13.31□□□□□ -0.28
LINC00339-208ENST00000634934 SLC38A5Q8WUX1 472 aa13.31□□□□□ -0.28
LINC00339-208ENST00000634934 APOBEC4Q8WW27 367 aaKnown RBP13.31□□□□□ -0.28
LINC00339-208ENST00000634934 EFHD2Q96C19 240 aaPredicted RBP13.31□□□□□ -0.28
LINC00339-208ENST00000634934 OMA1Q96E52 524 aa13.31□□□□□ -0.28
LINC00339-208ENST00000634934 REXO5Q96IC2 774 aaKnown RBP13.31□□□□□ -0.28
LINC00339-208ENST00000634934 RASL10BQ96S79 203 aa13.31□□□□□ -0.28
LINC00339-208ENST00000634934 SPATA9Q9BWV2 254 aa13.31□□□□□ -0.28
LINC00339-208ENST00000634934 SEMA6AQ9H2E6 1030 aa13.31□□□□□ -0.28
LINC00339-208ENST00000634934 A4GALTQ9NPC4 353 aa13.31□□□□□ -0.28
LINC00339-208ENST00000634934 SMPD3Q9NY59 655 aaPredicted RBP13.31□□□□□ -0.28
LINC00339-208ENST00000634934 STMN3Q9NZ72 180 aa13.31□□□□□ -0.28
LINC00339-208ENST00000634934 MRTO4Q9UKD2 239 aaKnown RBP13.31□□□□□ -0.28
LINC00339-208ENST00000634934 RALYQ9UKM9 306 aaKnown RBP13.31□□□□□ -0.28
LINC00339-208ENST00000634934 LIPT1Q9Y234 373 aa13.31□□□□□ -0.28
LINC00339-208ENST00000634934 NPFFR2Q9Y5X5 522 aa13.31□□□□□ -0.28
LINC00339-208ENST00000634934 CHD6Q8TD26 2715 aa13.3□□□□□ -0.28
LINC00339-208ENST00000634934 PRAMEF27A3QJZ7 478 aa13.3□□□□□ -0.28
LINC00339-208ENST00000634934 FAM220BPB1ANY3 271 aa13.3□□□□□ -0.28
LINC00339-208ENST00000634934 ZNF354AO60765 605 aaPredicted RBP13.3□□□□□ -0.28
LINC00339-208ENST00000634934 NADKO95544 446 aaPredicted RBP13.3□□□□□ -0.28
LINC00339-208ENST00000634934 AK1P00568 194 aa13.3□□□□□ -0.28
LINC00339-208ENST00000634934 TFPTP0C1Z6 253 aa13.3□□□□□ -0.28
LINC00339-208ENST00000634934 ARAFP10398 606 aa13.3□□□□□ -0.28
LINC00339-208ENST00000634934 ETS2P15036 469 aa13.3□□□□□ -0.28
LINC00339-208ENST00000634934 IL12BP29460 328 aa13.3□□□□□ -0.28
LINC00339-208ENST00000634934 SSR4P51571 173 aa13.3□□□□□ -0.28
LINC00339-208ENST00000634934 CDK6Q00534 326 aa13.3□□□□□ -0.28
LINC00339-208ENST00000634934 FUT5Q11128 374 aa13.3□□□□□ -0.28
LINC00339-208ENST00000634934 SCARB2Q14108 478 aa13.3□□□□□ -0.28
LINC00339-208ENST00000634934 ZNF630Q2M218 657 aaPredicted RBP13.3□□□□□ -0.28
LINC00339-208ENST00000634934 VMACQ2NL98 169 aa13.3□□□□□ -0.28
LINC00339-208ENST00000634934 ARHGAP11BQ3KRB8 267 aa13.3□□□□□ -0.28
LINC00339-208ENST00000634934 LRRC23Q53EV4 343 aaPredicted RBP13.3□□□□□ -0.28
LINC00339-208ENST00000634934 CRB2Q5IJ48 1285 aa13.3□□□□□ -0.28
LINC00339-208ENST00000634934 AGAP7PQ5VUJ5 663 aa13.3□□□□□ -0.28
LINC00339-208ENST00000634934 HEPHL1Q6MZM0 1159 aa13.3□□□□□ -0.28
LINC00339-208ENST00000634934 LINC00696Q6ZRV3 163 aa13.3□□□□□ -0.28
LINC00339-208ENST00000634934 TMEM156Q8N614 296 aa13.3□□□□□ -0.28
LINC00339-208ENST00000634934 FAM81AQ8TBF8 368 aa13.3□□□□□ -0.28
LINC00339-208ENST00000634934 SNRNP27Q8WVK2 155 aaKnown RBP13.3□□□□□ -0.28
LINC00339-208ENST00000634934 ASB15Q8WXK1 588 aa13.3□□□□□ -0.28
LINC00339-208ENST00000634934 TMEM19Q96HH6 336 aa13.3□□□□□ -0.28
LINC00339-208ENST00000634934 AGAP4Q96P64 663 aa13.3□□□□□ -0.28
LINC00339-208ENST00000634934 BDH2Q9BUT1 245 aa13.3□□□□□ -0.28
LINC00339-208ENST00000634934 TMEM38AQ9H6F2 299 aa13.3□□□□□ -0.28
LINC00339-208ENST00000634934 ZBTB20Q9HC78 741 aaPredicted RBP13.3□□□□□ -0.28
LINC00339-208ENST00000634934 FBXO34Q9NWN3 711 aa13.3□□□□□ -0.28
LINC00339-208ENST00000634934 ABI3Q9P2A4 366 aa13.3□□□□□ -0.28
LINC00339-208ENST00000634934 LHX6Q9UPM6 363 aa13.3□□□□□ -0.28
LINC00339-208ENST00000634934 ELOVL7A1L3X0 281 aa13.29□□□□□ -0.28
LINC00339-208ENST00000634934 GSTA4O15217 222 aa13.29□□□□□ -0.28
LINC00339-208ENST00000634934 LDLRP01130 860 aa13.29□□□□□ -0.28
LINC00339-208ENST00000634934 IGKV1D-16P01601 117 aa13.29□□□□□ -0.28
LINC00339-208ENST00000634934 ALPPP05187 535 aa13.29□□□□□ -0.28
LINC00339-208ENST00000634934 CHRM4P08173 479 aa13.29□□□□□ -0.28
LINC00339-208ENST00000634934 JUNBP17275 347 aaPredicted RBP13.29□□□□□ -0.28
LINC00339-208ENST00000634934 SOX3P41225 446 aa13.29□□□□□ -0.28
LINC00339-208ENST00000634934 PSMD4P55036 377 aaKnown RBP13.29□□□□□ -0.28
LINC00339-208ENST00000634934 PSPHP78330 225 aa13.29□□□□□ -0.28
LINC00339-208ENST00000634934 ADARB1P78563 741 aaKnown RBP13.29□□□□□ -0.28
LINC00339-208ENST00000634934 RBBP4Q09028 425 aa13.29□□□□□ -0.28
LINC00339-208ENST00000634934 GNA13Q14344 377 aa13.29□□□□□ -0.28
LINC00339-208ENST00000634934 RPS26P11Q5JNZ5 115 aaPredicted RBP13.29□□□□□ -0.28
LINC00339-208ENST00000634934 ERICH5Q6P6B1 374 aa13.29□□□□□ -0.28
LINC00339-208ENST00000634934 ISLR2Q6UXK2 745 aa13.29□□□□□ -0.28
LINC00339-208ENST00000634934 MICU2Q8IYU8 434 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms