RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 CSTF3Q12996 717 aaKnown RBP17.91■□□□□ 0.46
TARDBP-228ENST00000629725 TCHHL1Q5QJ38 904 aaPredicted RBP17.91■□□□□ 0.46
TARDBP-228ENST00000629725 TMEM201Q5SNT2 666 aa17.91■□□□□ 0.46
TARDBP-228ENST00000629725 PDSS1Q5T2R2 415 aa17.91■□□□□ 0.46
TARDBP-228ENST00000629725 HBMQ6B0K9 141 aa17.91■□□□□ 0.46
TARDBP-228ENST00000629725 TMEM107Q6UX40 140 aa17.91■□□□□ 0.46
TARDBP-228ENST00000629725 TFAP2EQ6VUC0 442 aa17.91■□□□□ 0.46
TARDBP-228ENST00000629725 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.91■□□□□ 0.46
TARDBP-228ENST00000629725 PIWIL2Q8TC59 973 aaKnown RBP17.91■□□□□ 0.46
TARDBP-228ENST00000629725 FBXO25Q8TCJ0 367 aa17.91■□□□□ 0.46
TARDBP-228ENST00000629725 ZNF483Q8TF39 744 aaPredicted RBP17.91■□□□□ 0.46
TARDBP-228ENST00000629725 C16orf78Q8WTQ4 265 aa17.91■□□□□ 0.46
TARDBP-228ENST00000629725 NPAS1Q99742 590 aa17.91■□□□□ 0.46
TARDBP-228ENST00000629725 C19orf24Q9BVV8 132 aa17.91■□□□□ 0.46
TARDBP-228ENST00000629725 SHCBP1LQ9BZQ2 653 aa17.91■□□□□ 0.46
TARDBP-228ENST00000629725 LPAR3Q9UBY5 353 aa17.91■□□□□ 0.46
TARDBP-228ENST00000629725 A0A096LNT2 108 aa17.9■□□□□ 0.46
TARDBP-228ENST00000629725 A0A0J9YW62 118 aa17.9■□□□□ 0.46
TARDBP-228ENST00000629725 DPRXA6NFQ7 191 aa17.9■□□□□ 0.46
TARDBP-228ENST00000629725 UPK1AO00322 258 aa17.9■□□□□ 0.46
TARDBP-228ENST00000629725 RAD51CO43502 376 aa17.9■□□□□ 0.46
TARDBP-228ENST00000629725 DLX3O60479 287 aa17.9■□□□□ 0.46
TARDBP-228ENST00000629725 SLITRK5O94991 958 aa17.9■□□□□ 0.46
TARDBP-228ENST00000629725 OR4F21O95013 312 aa17.9■□□□□ 0.46
TARDBP-228ENST00000629725 NTN1O95631 604 aa17.9■□□□□ 0.46
TARDBP-228ENST00000629725 KRT6AP02538 564 aa17.9■□□□□ 0.46
TARDBP-228ENST00000629725 KRT6BP04259 564 aa17.9■□□□□ 0.46
TARDBP-228ENST00000629725 PABPC4LP0CB38 370 aaKnown RBP17.9■□□□□ 0.46
TARDBP-228ENST00000629725 ME2P23368 584 aa17.9■□□□□ 0.46
TARDBP-228ENST00000629725 KRT6CP48668 564 aa17.9■□□□□ 0.46
TARDBP-228ENST00000629725 NUDT6P53370 316 aa17.9■□□□□ 0.46
TARDBP-228ENST00000629725 CAV1Q03135 178 aa17.9■□□□□ 0.46
TARDBP-228ENST00000629725 GRAMD1BQ3KR37 738 aa17.9■□□□□ 0.46
TARDBP-228ENST00000629725 SPIN4Q56A73 249 aa17.9■□□□□ 0.46
TARDBP-228ENST00000629725 DTX2Q86UW9 622 aa17.9■□□□□ 0.46
TARDBP-228ENST00000629725 CDYL2Q8N8U2 506 aa17.9■□□□□ 0.46
TARDBP-228ENST00000629725 OR10H5Q8NGA6 315 aa17.9■□□□□ 0.46
TARDBP-228ENST00000629725 OSTF1Q92882 214 aa17.9■□□□□ 0.46
TARDBP-228ENST00000629725 KISS1RQ969F8 398 aaPredicted RBP17.9■□□□□ 0.46
TARDBP-228ENST00000629725 ZBTB8AQ96BR9 441 aa17.9■□□□□ 0.46
TARDBP-228ENST00000629725 REXO5Q96IC2 774 aaKnown RBP17.9■□□□□ 0.46
TARDBP-228ENST00000629725 RNF145Q96MT1 663 aa17.9■□□□□ 0.46
TARDBP-228ENST00000629725 USB1Q9BQ65 265 aaKnown RBP17.9■□□□□ 0.46
TARDBP-228ENST00000629725 TMEM185BQ9H7F4 350 aa17.9■□□□□ 0.46
TARDBP-228ENST00000629725 DDX18Q9NVP1 670 aaKnown RBP17.9■□□□□ 0.46
TARDBP-228ENST00000629725 RNF14Q9UBS8 474 aa17.9■□□□□ 0.46
TARDBP-228ENST00000629725 B3GALT5Q9Y2C3 310 aa17.9■□□□□ 0.46
TARDBP-228ENST00000629725 MYO1GB0I1T2 1018 aa17.89■□□□□ 0.45
TARDBP-228ENST00000629725 MANBAO00462 879 aa17.89■□□□□ 0.45
TARDBP-228ENST00000629725 NDUFB5O43674 189 aa17.89■□□□□ 0.45
TARDBP-228ENST00000629725 KCNH1O95259 989 aa17.89■□□□□ 0.45
TARDBP-228ENST00000629725 PSMG1O95456 288 aa17.89■□□□□ 0.45
TARDBP-228ENST00000629725 PYGBP11216 843 aa17.89■□□□□ 0.45
TARDBP-228ENST00000629725 CHN1P15882 459 aa17.89■□□□□ 0.45
TARDBP-228ENST00000629725 PSMA4P25789 261 aaKnown RBP17.89■□□□□ 0.45
TARDBP-228ENST00000629725 CASP9P55211 416 aa17.89■□□□□ 0.45
TARDBP-228ENST00000629725 CARD18P57730 90 aa17.89■□□□□ 0.45
TARDBP-228ENST00000629725 VLDLRP98155 873 aa17.89■□□□□ 0.45
TARDBP-228ENST00000629725 ACSM2AQ08AH3 577 aa17.89■□□□□ 0.45
TARDBP-228ENST00000629725 CPTPQ5TA50 214 aa17.89■□□□□ 0.45
TARDBP-228ENST00000629725 ACSM2BQ68CK6 577 aa17.89■□□□□ 0.45
TARDBP-228ENST00000629725 CLEC2AQ6UVW9 174 aa17.89■□□□□ 0.45
TARDBP-228ENST00000629725 OR2L13Q8N349 312 aa17.89■□□□□ 0.45
TARDBP-228ENST00000629725 BANPQ8N9N5 519 aa17.89■□□□□ 0.45
TARDBP-228ENST00000629725 ABHD3Q8WU67 409 aa17.89■□□□□ 0.45
TARDBP-228ENST00000629725 ROBO4Q8WZ75 1007 aa17.89■□□□□ 0.45
TARDBP-228ENST00000629725 APIPQ96GX9 242 aa17.89■□□□□ 0.45
TARDBP-228ENST00000629725 LMF2Q9BU23 707 aaKnown RBP17.89■□□□□ 0.45
TARDBP-228ENST00000629725 EBPLQ9BY08 206 aa17.89■□□□□ 0.45
TARDBP-228ENST00000629725 POTEKPQ9BYX7 375 aa17.89■□□□□ 0.45
TARDBP-228ENST00000629725 ACPTQ9BZG2 426 aa17.89■□□□□ 0.45
TARDBP-228ENST00000629725 SHARPINQ9H0F6 387 aa17.89■□□□□ 0.45
TARDBP-228ENST00000629725 C3orf14Q9HBI5 128 aa17.89■□□□□ 0.45
TARDBP-228ENST00000629725 HHATLQ9HCP6 504 aa17.89■□□□□ 0.45
TARDBP-228ENST00000629725 C7orf72A4D263 438 aa17.88■□□□□ 0.45
TARDBP-228ENST00000629725 RAMP1O60894 148 aa17.88■□□□□ 0.45
TARDBP-228ENST00000629725 ULK1O75385 1050 aa17.88■□□□□ 0.45
TARDBP-228ENST00000629725 ADAP00813 363 aa17.88■□□□□ 0.45
TARDBP-228ENST00000629725 DDCP20711 480 aa17.88■□□□□ 0.45
TARDBP-228ENST00000629725 TIA1P31483 386 aaKnown RBP eCLIP17.88■□□□□ 0.451e-8■■□□□ 14.3
TARDBP-228ENST00000629725 GABRA3P34903 492 aa17.88■□□□□ 0.45
TARDBP-228ENST00000629725 THBS2P35442 1172 aa17.88■□□□□ 0.45
TARDBP-228ENST00000629725 ZNF41P51814 821 aaPredicted RBP17.88■□□□□ 0.45
TARDBP-228ENST00000629725 C21orf58P58505 322 aa17.88■□□□□ 0.45
TARDBP-228ENST00000629725 DSCR9P59020 149 aa17.88■□□□□ 0.45
TARDBP-228ENST00000629725 GUCY2DQ02846 1103 aa17.88■□□□□ 0.45
TARDBP-228ENST00000629725 LOXL1Q08397 574 aaPredicted RBP17.88■□□□□ 0.45
TARDBP-228ENST00000629725 ITGADQ13349 1161 aa17.88■□□□□ 0.45
TARDBP-228ENST00000629725 P2RY6Q15077 328 aa17.88■□□□□ 0.45
TARDBP-228ENST00000629725 RNPS1Q15287 305 aaKnown RBP17.88■□□□□ 0.45
TARDBP-228ENST00000629725 TSNAXIP1Q2TAA8 658 aa17.88■□□□□ 0.45
TARDBP-228ENST00000629725 PLPPR5Q32ZL2 321 aa17.88■□□□□ 0.45
TARDBP-228ENST00000629725 SEZ6L2Q6UXD5 910 aa17.88■□□□□ 0.45
TARDBP-228ENST00000629725 NUFIP2Q7Z417 695 aaKnown RBP17.88■□□□□ 0.45
TARDBP-228ENST00000629725 TUSC5Q8IXB3 177 aa17.88■□□□□ 0.45
TARDBP-228ENST00000629725 RNF128Q8TEB7 428 aa17.88■□□□□ 0.45
TARDBP-228ENST00000629725 ADAD1Q96M93 576 aaKnown RBP17.88■□□□□ 0.45
TARDBP-228ENST00000629725 C1QTNF3Q9BXJ4 246 aa17.88■□□□□ 0.45
TARDBP-228ENST00000629725 KLHL13Q9P2N7 655 aa17.88■□□□□ 0.45
TARDBP-228ENST00000629725 UTP11Q9Y3A2 253 aaKnown RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms