RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 RNF145Q96MT1 663 aa13.07□□□□□ -0.32
PNKP-218ENST00000625299 NAPGQ99747 312 aaPredicted RBP13.07□□□□□ -0.32
PNKP-218ENST00000625299 HDHD5Q9BXW7 423 aa13.07□□□□□ -0.32
PNKP-218ENST00000625299 CISD1Q9NZ45 108 aaKnown RBP13.07□□□□□ -0.32
PNKP-218ENST00000625299 A0A0J9YW62 118 aa13.06□□□□□ -0.32
PNKP-218ENST00000625299 GXYLT2A0PJZ3 443 aa13.06□□□□□ -0.32
PNKP-218ENST00000625299 ADAP00813 363 aa13.06□□□□□ -0.32
PNKP-218ENST00000625299 CD8AP01732 235 aa13.06□□□□□ -0.32
PNKP-218ENST00000625299 KRT6AP02538 564 aa13.06□□□□□ -0.32
PNKP-218ENST00000625299 KRT6BP04259 564 aa13.06□□□□□ -0.32
PNKP-218ENST00000625299 ADH6P28332 368 aa13.06□□□□□ -0.32
PNKP-218ENST00000625299 TIA1P31483 386 aaKnown RBP eCLIP13.06□□□□□ -0.32
PNKP-218ENST00000625299 GABRA3P34903 492 aa13.06□□□□□ -0.32
PNKP-218ENST00000625299 KRT6CP48668 564 aa13.06□□□□□ -0.32
PNKP-218ENST00000625299 ZNF41P51814 821 aaPredicted RBP13.06□□□□□ -0.32
PNKP-218ENST00000625299 CASP9P55211 416 aa13.06□□□□□ -0.32
PNKP-218ENST00000625299 CDH11P55287 796 aa13.06□□□□□ -0.32
PNKP-218ENST00000625299 C21orf58P58505 322 aa13.06□□□□□ -0.32
PNKP-218ENST00000625299 PRR5P85299 388 aa13.06□□□□□ -0.32
PNKP-218ENST00000625299 ACSM2AQ08AH3 577 aa13.06□□□□□ -0.32
PNKP-218ENST00000625299 STK11Q15831 433 aa13.06□□□□□ -0.32
PNKP-218ENST00000625299 PDSS1Q5T2R2 415 aa13.06□□□□□ -0.32
PNKP-218ENST00000625299 ACSM2BQ68CK6 577 aa13.06□□□□□ -0.32
PNKP-218ENST00000625299 GTF2IRD2BQ6EKJ0 949 aa13.06□□□□□ -0.32
PNKP-218ENST00000625299 CLEC2AQ6UVW9 174 aa13.06□□□□□ -0.32
PNKP-218ENST00000625299 TFAP2EQ6VUC0 442 aa13.06□□□□□ -0.32
PNKP-218ENST00000625299 ESPNLQ6ZVH7 1005 aa13.06□□□□□ -0.32
PNKP-218ENST00000625299 NUFIP2Q7Z417 695 aaKnown RBP13.06□□□□□ -0.32
PNKP-218ENST00000625299 GTF2IRD2Q86UP8 949 aa13.06□□□□□ -0.32
PNKP-218ENST00000625299 GABRG1Q8N1C3 465 aa13.06□□□□□ -0.32
PNKP-218ENST00000625299 HSD17B8Q92506 261 aa13.06□□□□□ -0.32
PNKP-218ENST00000625299 OSTF1Q92882 214 aa13.06□□□□□ -0.32
PNKP-218ENST00000625299 APIPQ96GX9 242 aa13.06□□□□□ -0.32
PNKP-218ENST00000625299 SH3YL1Q96HL8 342 aaPredicted RBP13.06□□□□□ -0.32
PNKP-218ENST00000625299 POTEKPQ9BYX7 375 aa13.06□□□□□ -0.32
PNKP-218ENST00000625299 ACPTQ9BZG2 426 aa13.06□□□□□ -0.32
PNKP-218ENST00000625299 TRIM2Q9C040 744 aa13.06□□□□□ -0.32
PNKP-218ENST00000625299 SHARPINQ9H0F6 387 aa13.06□□□□□ -0.32
PNKP-218ENST00000625299 EQTNQ9NQ60 294 aa13.06□□□□□ -0.32
PNKP-218ENST00000625299 FAIMQ9NVQ4 179 aa13.06□□□□□ -0.32
PNKP-218ENST00000625299 ZNF225Q9UK10 706 aa13.06□□□□□ -0.32
PNKP-218ENST00000625299 C19orf53Q9UNZ5 99 aaPredicted RBP13.06□□□□□ -0.32
PNKP-218ENST00000625299 B3GALT5Q9Y2C3 310 aa13.06□□□□□ -0.32
PNKP-218ENST00000625299 A0A087WV62 115 aa13.05□□□□□ -0.32
PNKP-218ENST00000625299 A0A087WZY1 265 aa13.05□□□□□ -0.32
PNKP-218ENST00000625299 IGLV3-32A0A0A0MS00 114 aa13.05□□□□□ -0.32
PNKP-218ENST00000625299 A0A1W2PRB8 838 aa13.05□□□□□ -0.32
PNKP-218ENST00000625299 DPRXA6NFQ7 191 aa13.05□□□□□ -0.32
PNKP-218ENST00000625299 MYO1GB0I1T2 1018 aa13.05□□□□□ -0.32
PNKP-218ENST00000625299 UPK1AO00322 258 aa13.05□□□□□ -0.32
PNKP-218ENST00000625299 ADAMDEC1O15204 470 aa13.05□□□□□ -0.32
PNKP-218ENST00000625299 DLX3O60479 287 aa13.05□□□□□ -0.32
PNKP-218ENST00000625299 RAMP1O60894 148 aa13.05□□□□□ -0.32
PNKP-218ENST00000625299 KCNH1O95259 989 aa13.05□□□□□ -0.32
PNKP-218ENST00000625299 IGKV1D-16P01601 117 aa13.05□□□□□ -0.32
PNKP-218ENST00000625299 THBS1P07996 1170 aa13.05□□□□□ -0.32
PNKP-218ENST00000625299 HSD3B1P14060 373 aa13.05□□□□□ -0.32
PNKP-218ENST00000625299 ZNF16P17020 682 aaPredicted RBP13.05□□□□□ -0.32
PNKP-218ENST00000625299 HSD3B2P26439 372 aa13.05□□□□□ -0.32
PNKP-218ENST00000625299 HMOX2P30519 316 aa13.05□□□□□ -0.32
PNKP-218ENST00000625299 SFTPDP35247 375 aa13.05□□□□□ -0.32
PNKP-218ENST00000625299 RAC1P63000 192 aa13.05□□□□□ -0.32
PNKP-218ENST00000625299 C2orf54Q08AI8 447 aa13.05□□□□□ -0.32
PNKP-218ENST00000625299 C2orf80Q0P641 193 aa13.05□□□□□ -0.32
PNKP-218ENST00000625299 NRF1Q16656 503 aa13.05□□□□□ -0.32
PNKP-218ENST00000625299 PRSS53Q2L4Q9 553 aa13.05□□□□□ -0.32
PNKP-218ENST00000625299 SPIN4Q56A73 249 aa13.05□□□□□ -0.32
PNKP-218ENST00000625299 BHLHA15Q7RTS1 189 aaPredicted RBP13.05□□□□□ -0.32
PNKP-218ENST00000625299 TUSC5Q8IXB3 177 aa13.05□□□□□ -0.32
PNKP-218ENST00000625299 GTPBP8Q8N3Z3 284 aaPredicted RBP13.05□□□□□ -0.32
PNKP-218ENST00000625299 PIWIL2Q8TC59 973 aaKnown RBP13.05□□□□□ -0.32
PNKP-218ENST00000625299 PIK3R3Q92569 461 aa13.05□□□□□ -0.32
PNKP-218ENST00000625299 HTRA1Q92743 480 aa13.05□□□□□ -0.32
PNKP-218ENST00000625299 ADAD1Q96M93 576 aaKnown RBP13.05□□□□□ -0.32
PNKP-218ENST00000625299 TNFRSF13CQ96RJ3 184 aa13.05□□□□□ -0.32
PNKP-218ENST00000625299 MANSC1Q9H8J5 431 aa13.05□□□□□ -0.32
PNKP-218ENST00000625299 C3orf14Q9HBI5 128 aa13.05□□□□□ -0.32
PNKP-218ENST00000625299 MIEF1Q9NQG6 463 aa13.05□□□□□ -0.32
PNKP-218ENST00000625299 MED17Q9NVC6 651 aa13.05□□□□□ -0.32
PNKP-218ENST00000625299 NFU1Q9UMS0 254 aa13.05□□□□□ -0.32
PNKP-218ENST00000625299 UTP11Q9Y3A2 253 aaKnown RBP13.05□□□□□ -0.32
PNKP-218ENST00000625299 SVEP1Q4LDE5 3571 aa13.04□□□□□ -0.32
PNKP-218ENST00000625299 YLPM1P49750 1951 aaKnown RBP13.04□□□□□ -0.32
PNKP-218ENST00000625299 A8MT66 165 aa13.04□□□□□ -0.32
PNKP-218ENST00000625299 UBFD1O14562 309 aaKnown RBP13.04□□□□□ -0.32
PNKP-218ENST00000625299 ANXA4P09525 319 aaPredicted RBP13.04□□□□□ -0.32
PNKP-218ENST00000625299 PABPC4LP0CB38 370 aaKnown RBP13.04□□□□□ -0.32
PNKP-218ENST00000625299 DDCP20711 480 aa13.04□□□□□ -0.32
PNKP-218ENST00000625299 NTSP30990 170 aa13.04□□□□□ -0.32
PNKP-218ENST00000625299 HTR6P50406 440 aa13.04□□□□□ -0.32
PNKP-218ENST00000625299 CARD18P57730 90 aa13.04□□□□□ -0.32
PNKP-218ENST00000625299 CAV1Q03135 178 aa13.04□□□□□ -0.32
PNKP-218ENST00000625299 CLCQ05315 142 aa13.04□□□□□ -0.32
PNKP-218ENST00000625299 TRADDQ15628 312 aa13.04□□□□□ -0.32
PNKP-218ENST00000625299 ZNF239Q16600 458 aaKnown RBP13.04□□□□□ -0.32
PNKP-218ENST00000625299 TSNAXIP1Q2TAA8 658 aa13.04□□□□□ -0.32
PNKP-218ENST00000625299 PLPPR5Q32ZL2 321 aa13.04□□□□□ -0.32
PNKP-218ENST00000625299 TEX35Q5T0J7 233 aa13.04□□□□□ -0.32
PNKP-218ENST00000625299 ZDHHC24Q6UX98 284 aa13.04□□□□□ -0.32
PNKP-218ENST00000625299 EXOC3L1Q86VI1 746 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 158.2 ms