RNA–Protein interactions for RNA: ENST00000623052.1

C9orf170-201, Transcript of chromosome 9 open reading frame 170, humanhuman

TSL 1 (best) BASIC

Gene C9orf170, Length 3,239 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf170-201ENST00000623052 TRIM45Q9H8W5 580 aaPredicted RBP12.43□□□□□ -0.42
C9orf170-201ENST00000623052 LYARQ9NX58 379 aaKnown RBP12.43□□□□□ -0.42
C9orf170-201ENST00000623052 FANCMQ8IYD8 2048 aa12.43□□□□□ -0.42
C9orf170-201ENST00000623052 CCDC182A6NF36 153 aa12.43□□□□□ -0.42
C9orf170-201ENST00000623052 SNTNA6NMZ2 147 aa12.43□□□□□ -0.42
C9orf170-201ENST00000623052 CTSVO60911 334 aa12.43□□□□□ -0.42
C9orf170-201ENST00000623052 EVX1P49640 407 aa12.43□□□□□ -0.42
C9orf170-201ENST00000623052 RPS21P63220 83 aaKnown RBP12.43□□□□□ -0.42
C9orf170-201ENST00000623052 TRMT12Q53H54 448 aaKnown RBP12.43□□□□□ -0.42
C9orf170-201ENST00000623052 EXOSC6Q5RKV6 272 aaKnown RBP12.43□□□□□ -0.42
C9orf170-201ENST00000623052 C1QTNF12Q5T7M4 302 aa12.43□□□□□ -0.42
C9orf170-201ENST00000623052 FBXO42Q6P3S6 717 aa12.43□□□□□ -0.42
C9orf170-201ENST00000623052 TRIM48Q8IWZ4 208 aa12.43□□□□□ -0.42
C9orf170-201ENST00000623052 GJD3Q8N144 294 aa12.43□□□□□ -0.42
C9orf170-201ENST00000623052 KLHL36Q8N4N3 616 aa12.43□□□□□ -0.42
C9orf170-201ENST00000623052 AP3S1Q92572 193 aa12.43□□□□□ -0.42
C9orf170-201ENST00000623052 COL26A1Q96A83 441 aa12.43□□□□□ -0.42
C9orf170-201ENST00000623052 UPRTQ96BW1 309 aa12.43□□□□□ -0.42
C9orf170-201ENST00000623052 ATP13A2Q9NQ11 1180 aa12.43□□□□□ -0.42
C9orf170-201ENST00000623052 MED17Q9NVC6 651 aa12.43□□□□□ -0.42
C9orf170-201ENST00000623052 CALML5Q9NZT1 146 aa12.43□□□□□ -0.42
C9orf170-201ENST00000623052 ZNF624Q9P2J8 865 aaPredicted RBP12.43□□□□□ -0.42
C9orf170-201ENST00000623052 SLC13A4Q9UKG4 626 aa12.43□□□□□ -0.42
C9orf170-201ENST00000623052 CA5BQ9Y2D0 317 aa12.43□□□□□ -0.42
C9orf170-201ENST00000623052 MRPS2Q9Y399 296 aaKnown RBP12.43□□□□□ -0.42
C9orf170-201ENST00000623052 NPIPA5A0A0B4J1W7 369 aa12.42□□□□□ -0.42
C9orf170-201ENST00000623052 FAM172BPA6NC97 362 aa12.42□□□□□ -0.42
C9orf170-201ENST00000623052 NPIPA7E9PJI5 369 aa12.42□□□□□ -0.42
C9orf170-201ENST00000623052 BHLHE40O14503 412 aa12.42□□□□□ -0.42
C9orf170-201ENST00000623052 GKN3PP0CG01 181 aa12.42□□□□□ -0.42
C9orf170-201ENST00000623052 NPIPA8P0DM63 369 aa12.42□□□□□ -0.42
C9orf170-201ENST00000623052 SMIM10L1P0DMW3 83 aa12.42□□□□□ -0.42
C9orf170-201ENST00000623052 TFPIP10646 304 aa12.42□□□□□ -0.42
C9orf170-201ENST00000623052 IL9P15248 144 aa12.42□□□□□ -0.42
C9orf170-201ENST00000623052 RPS4Y1P22090 263 aaKnown RBP12.42□□□□□ -0.42
C9orf170-201ENST00000623052 KIR2DL1P43626 348 aaPredicted RBP12.42□□□□□ -0.42
C9orf170-201ENST00000623052 ARHGAP11BQ3KRB8 267 aa12.42□□□□□ -0.42
C9orf170-201ENST00000623052 NIPAL3Q6P499 406 aa12.42□□□□□ -0.42
C9orf170-201ENST00000623052 PLBD1Q6P4A8 553 aa12.42□□□□□ -0.42
C9orf170-201ENST00000623052 SMARCD3Q6STE5 483 aa12.42□□□□□ -0.42
C9orf170-201ENST00000623052 AMIGO1Q86WK6 493 aa12.42□□□□□ -0.42
C9orf170-201ENST00000623052 TMEFF1Q8IYR6 380 aa12.42□□□□□ -0.42
C9orf170-201ENST00000623052 Q8N402 240 aa12.42□□□□□ -0.42
C9orf170-201ENST00000623052 OR51G2Q8NGK0 314 aa12.42□□□□□ -0.42
C9orf170-201ENST00000623052 ZCCHC10Q8TBK6 192 aa12.42□□□□□ -0.42
C9orf170-201ENST00000623052 HERVK_113Q902F9 699 aa12.42□□□□□ -0.42
C9orf170-201ENST00000623052 SMIM10Q96HG1 83 aa12.42□□□□□ -0.42
C9orf170-201ENST00000623052 SDF2Q99470 211 aa12.42□□□□□ -0.42
C9orf170-201ENST00000623052 KXD1Q9BQD3 176 aa12.42□□□□□ -0.42
C9orf170-201ENST00000623052 CD93Q9NPY3 652 aa12.42□□□□□ -0.42
C9orf170-201ENST00000623052 OBP2AQ9NY56 170 aa12.42□□□□□ -0.42
C9orf170-201ENST00000623052 GSTK1Q9Y2Q3 226 aa12.42□□□□□ -0.42
C9orf170-201ENST00000623052 A0A0C4DFX4 3053 aa12.42□□□□□ -0.42
C9orf170-201ENST00000623052 PRSS38A1L453 326 aa12.42□□□□□ -0.42
C9orf170-201ENST00000623052 POM121BA6NF01 834 aa12.42□□□□□ -0.42
C9orf170-201ENST00000623052 K7EQS6 105 aa12.42□□□□□ -0.42
C9orf170-201ENST00000623052 NDUFV2P19404 249 aa12.42□□□□□ -0.42
C9orf170-201ENST00000623052 ADPRHP54922 357 aa12.42□□□□□ -0.42
C9orf170-201ENST00000623052 ID2Q02363 134 aa12.42□□□□□ -0.42
C9orf170-201ENST00000623052 CXXC5Q7LFL8 322 aaKnown RBP12.42□□□□□ -0.42
C9orf170-201ENST00000623052 PRSS41Q7RTY9 318 aa12.42□□□□□ -0.42
C9orf170-201ENST00000623052 BMPERQ8N8U9 685 aa12.42□□□□□ -0.42
C9orf170-201ENST00000623052 TMEM52Q8NDY8 209 aa12.42□□□□□ -0.42
C9orf170-201ENST00000623052 OR2T33Q8NG76 320 aa12.42□□□□□ -0.42
C9orf170-201ENST00000623052 OR14C36Q8NHC7 312 aa12.42□□□□□ -0.42
C9orf170-201ENST00000623052 NT5CQ8TCD5 201 aa12.42□□□□□ -0.42
C9orf170-201ENST00000623052 RFKQ969G6 155 aa12.42□□□□□ -0.42
C9orf170-201ENST00000623052 TM4SF19Q96DZ7 209 aa12.42□□□□□ -0.42
C9orf170-201ENST00000623052 KCNJ15Q99712 375 aa12.42□□□□□ -0.42
C9orf170-201ENST00000623052 RMI1Q9H9A7 625 aa12.42□□□□□ -0.42
C9orf170-201ENST00000623052 WDR45Q9Y484 360 aa12.42□□□□□ -0.42
C9orf170-201ENST00000623052 H0Y8X5 98 aa12.41□□□□□ -0.42
C9orf170-201ENST00000623052 PEX12O00623 359 aa12.41□□□□□ -0.42
C9orf170-201ENST00000623052 AKAP8O43823 692 aaKnown RBP12.41□□□□□ -0.42
C9orf170-201ENST00000623052 SLC2A2P11168 524 aaPredicted RBP12.41□□□□□ -0.42
C9orf170-201ENST00000623052 THSD4Q6ZMP0 1018 aa12.41□□□□□ -0.42
C9orf170-201ENST00000623052 ASPGQ86U10 573 aa12.41□□□□□ -0.42
C9orf170-201ENST00000623052 BRIX1Q8TDN6 353 aaKnown RBP12.41□□□□□ -0.42
C9orf170-201ENST00000623052 FRMD6Q96NE9 622 aa12.41□□□□□ -0.42
C9orf170-201ENST00000623052 RPP25Q9BUL9 199 aaKnown RBP12.41□□□□□ -0.42
C9orf170-201ENST00000623052 ZNF350Q9GZX5 532 aa12.41□□□□□ -0.42
C9orf170-201ENST00000623052 TWSG1Q9GZX9 223 aa12.41□□□□□ -0.42
C9orf170-201ENST00000623052 OR52D1Q9H346 318 aa12.41□□□□□ -0.42
C9orf170-201ENST00000623052 PAQR5Q9NXK6 330 aaPredicted RBP12.41□□□□□ -0.42
C9orf170-201ENST00000623052 LRP4O75096 1905 aa12.41□□□□□ -0.42
C9orf170-201ENST00000623052 TICRRQ7Z2Z1 1910 aa12.41□□□□□ -0.42
C9orf170-201ENST00000623052 E9PI62 339 aa12.41□□□□□ -0.42
C9orf170-201ENST00000623052 RNF13O43567 381 aa12.41□□□□□ -0.42
C9orf170-201ENST00000623052 CHRNB1P11230 501 aa12.41□□□□□ -0.42
C9orf170-201ENST00000623052 MLLT3P42568 568 aaPredicted RBP12.41□□□□□ -0.42
C9orf170-201ENST00000623052 AGFG1P52594 562 aaKnown RBP12.41□□□□□ -0.42
C9orf170-201ENST00000623052 CTBP2P56545 445 aa12.41□□□□□ -0.42
C9orf170-201ENST00000623052 CSTF1Q05048 431 aaKnown RBP12.41□□□□□ -0.42
C9orf170-201ENST00000623052 SGCGQ13326 291 aa12.41□□□□□ -0.42
C9orf170-201ENST00000623052 RIN1Q13671 783 aa12.41□□□□□ -0.42
C9orf170-201ENST00000623052 DEFB134Q4QY38 66 aa12.41□□□□□ -0.42
C9orf170-201ENST00000623052 LCN1P1Q5VSP4 162 aa12.41□□□□□ -0.42
C9orf170-201ENST00000623052 RRM2BQ7LG56 351 aa12.41□□□□□ -0.42
C9orf170-201ENST00000623052 SRFBP1Q8NEF9 429 aaKnown RBP12.41□□□□□ -0.42
C9orf170-201ENST00000623052 OR1E3Q8WZA6 343 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms