RNA–Protein interactions for RNA: ENST00000620916.2

MATR3-228, Transcript of matrin 3, humanhuman

TSL 5 BASIC

Gene MATR3, Length 3,134 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-228ENST00000620916 CLIC1O00299 241 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 SRPX2O60687 465 aaPredicted RBP4.78□□□□□ -1.64
MATR3-228ENST00000620916 PQBP1O60828 265 aaKnown RBP4.78□□□□□ -1.64
MATR3-228ENST00000620916 STBD1O95210 358 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 CYBBP04839 570 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 UQCRFS1P1P0C7P4 283 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 ZNF865P0CJ78 1059 aaPredicted RBP4.78□□□□□ -1.64
MATR3-228ENST00000620916 FGF3P11487 239 aaPredicted RBP4.78□□□□□ -1.64
MATR3-228ENST00000620916 HSD17B1P14061 328 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 ABOP16442 354 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 EFNA1P20827 205 aaPredicted RBP4.78□□□□□ -1.64
MATR3-228ENST00000620916 SFNP31947 248 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 ARSEP51690 589 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 DLX5P56178 289 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 ERVS71-1P61550 626 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 NPRL3Q12980 569 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 SLBPQ14493 270 aaKnown RBP eCLIP4.78□□□□□ -1.64
MATR3-228ENST00000620916 SF3A2Q15428 464 aaKnown RBP4.78□□□□□ -1.64
MATR3-228ENST00000620916 TIMM50Q3ZCQ8 353 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 RFTN2Q52LD8 501 aaPredicted RBP4.78□□□□□ -1.64
MATR3-228ENST00000620916 PLA1AQ53H76 456 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 MRM1Q6IN84 353 aaKnown RBP4.78□□□□□ -1.64
MATR3-228ENST00000620916 VHLLQ6RSH7 139 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 C6orf15Q6UXA7 325 aaPredicted RBP4.78□□□□□ -1.64
MATR3-228ENST00000620916 CLEC9AQ6UXN8 241 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 ABI3BPQ7Z7G0 1075 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 ZNF573Q86YE8 665 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 FUNDC1Q8IVP5 155 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 WDFY1Q8IWB7 410 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 PLD6Q8N2A8 252 aaKnown RBP4.78□□□□□ -1.64
MATR3-228ENST00000620916 BHLHE23Q8NDY6 225 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 BPIFCQ8NFQ6 507 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 OR51A7Q8NH64 312 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 TSEN15Q8WW01 171 aaKnown RBP4.78□□□□□ -1.64
MATR3-228ENST00000620916 KCNE4Q8WWG9 221 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 UPRTQ96BW1 309 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 SCRN2Q96FV2 425 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 TCTN2Q96GX1 697 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 FCRL1Q96LA6 429 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 MTERF1Q99551 399 aaKnown RBP4.78□□□□□ -1.64
MATR3-228ENST00000620916 BARX1Q9HBU1 254 aaPredicted RBP4.78□□□□□ -1.64
MATR3-228ENST00000620916 OSGEPQ9NPF4 335 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 ACP6Q9NPH0 428 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 SMCO4Q9NRQ5 59 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 GPR173Q9NS66 373 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 GAR1Q9NY12 217 aaKnown RBP4.78□□□□□ -1.64
MATR3-228ENST00000620916 ZNF225Q9UK10 706 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 PSG11Q9UQ72 335 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 CDH10Q9Y6N8 788 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 SZT2Q5T011 3432 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 MKI67P46013 3256 aaKnown RBP4.78□□□□□ -1.64
MATR3-228ENST00000620916 TCRBV7S2A1N4TA0A589 114 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 C5orf58C9J3I9 102 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 INMT-MINDY4F8WBC2 141 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 DFFAO00273 331 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 NR5A2O00482 541 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 ZMPSTE24O75844 475 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 CLDN9O95484 217 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 F13BP05160 661 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 SULT1A3P0DMM9 295 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 SULT1A4P0DMN0 295 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 KITP10721 976 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 PNLIPP16233 465 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 IL7RP16871 459 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 TYMPP19971 482 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 PTPN3P26045 913 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 APEX1P27695 318 aaKnown RBP4.78□□□□□ -1.64
MATR3-228ENST00000620916 C21orf33P30042 268 aaPredicted RBP4.78□□□□□ -1.64
MATR3-228ENST00000620916 GGT2P36268 569 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 KCNQ1P51787 676 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 LSM3P62310 102 aaKnown RBP4.78□□□□□ -1.64
MATR3-228ENST00000620916 CD47Q08722 323 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 SLC10A2Q12908 348 aaPredicted RBP4.78□□□□□ -1.64
MATR3-228ENST00000620916 FCN2Q15485 313 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 SURF2Q15527 256 aaPredicted RBP4.78□□□□□ -1.64
MATR3-228ENST00000620916 GUK1Q16774 197 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 CTU2Q2VPK5 515 aaKnown RBP4.78□□□□□ -1.64
MATR3-228ENST00000620916 HNRNPA1L2Q32P51 320 aaKnown RBP4.78□□□□□ -1.64
MATR3-228ENST00000620916 SIRPB2Q5JXA9 342 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 PIP5KL1Q5T9C9 394 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 LGSNQ5TDP6 509 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 B3GNT9Q6UX72 402 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 ARMCX2Q7L311 632 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 LINGO2Q7L985 606 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 GRINAQ7Z429 371 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 UNC93AQ86WB7 457 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 CBLN2Q8IUK8 224 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 SERPINA12Q8IW75 414 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 NPAS3Q8IXF0 933 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 MMP21Q8N119 569 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 ACBD7Q8N6N7 88 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 ZNF555Q8NEP9 628 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 DUSP19Q8WTR2 217 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 KCNJ9Q92806 393 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 CDS1Q92903 461 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 NSUN4Q96CB9 384 aaKnown RBP4.78□□□□□ -1.64
MATR3-228ENST00000620916 P2RY11Q96G91 374 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 SENP8Q96LD8 212 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 MS4A4EQ96PG1 132 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 WRAP53Q9BUR4 548 aaKnown RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms