RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 C8orf89P0DMQ9 161 aa18.26■□□□□ 0.51
PDLIM3-212ENST00000620787 PTNP21246 168 aa18.26■□□□□ 0.51
PDLIM3-212ENST00000620787 SP3Q02447 781 aa18.26■□□□□ 0.51
PDLIM3-212ENST00000620787 TEAD2Q15562 447 aa18.26■□□□□ 0.51
PDLIM3-212ENST00000620787 COL28A1Q2UY09 1125 aa18.26■□□□□ 0.51
PDLIM3-212ENST00000620787 CDC73Q6P1J9 531 aa18.26■□□□□ 0.51
PDLIM3-212ENST00000620787 LILRA6Q6PI73 481 aa18.26■□□□□ 0.51
PDLIM3-212ENST00000620787 AMZ2Q86W34 360 aa18.26■□□□□ 0.51
PDLIM3-212ENST00000620787 GID4Q8IVV7 300 aa18.26■□□□□ 0.51
PDLIM3-212ENST00000620787 LINC01555Q8NAE3 123 aa18.26■□□□□ 0.51
PDLIM3-212ENST00000620787 HGDQ93099 445 aa18.26■□□□□ 0.51
PDLIM3-212ENST00000620787 SLC41A3Q96GZ6 507 aa18.26■□□□□ 0.51
PDLIM3-212ENST00000620787 EQTNQ9NQ60 294 aa18.26■□□□□ 0.51
PDLIM3-212ENST00000620787 IRAK3Q9Y616 596 aa18.26■□□□□ 0.51
PDLIM3-212ENST00000620787 LOC105369274A0A096LPK9 316 aa18.25■□□□□ 0.51
PDLIM3-212ENST00000620787 IGKV1-8A0A0C4DH67 115 aa18.25■□□□□ 0.51
PDLIM3-212ENST00000620787 INHAP05111 366 aa18.25■□□□□ 0.51
PDLIM3-212ENST00000620787 SYPP08247 313 aa18.25■□□□□ 0.51
PDLIM3-212ENST00000620787 ZGLP1P0C6A0 271 aa18.25■□□□□ 0.51
PDLIM3-212ENST00000620787 F8A1P23610 371 aa18.25■□□□□ 0.51
PDLIM3-212ENST00000620787 HOXD10P28358 340 aa18.25■□□□□ 0.51
PDLIM3-212ENST00000620787 HSD17B2P37059 387 aa18.25■□□□□ 0.51
PDLIM3-212ENST00000620787 EPHA5P54756 1037 aa18.25■□□□□ 0.51
PDLIM3-212ENST00000620787 RGS8P57771 180 aaPredicted RBP18.25■□□□□ 0.51
PDLIM3-212ENST00000620787 STXBP1P61764 594 aaKnown RBP18.25■□□□□ 0.51
PDLIM3-212ENST00000620787 TGM3Q08188 693 aa18.25■□□□□ 0.51
PDLIM3-212ENST00000620787 COL9A2Q14055 689 aaPredicted RBP18.25■□□□□ 0.51
PDLIM3-212ENST00000620787 ADCK2Q7Z695 626 aa18.25■□□□□ 0.51
PDLIM3-212ENST00000620787 OR4N4Q8N0Y3 316 aa18.25■□□□□ 0.51
PDLIM3-212ENST00000620787 OR5W2Q8NH69 310 aa18.25■□□□□ 0.51
PDLIM3-212ENST00000620787 MOAP1Q96BY2 351 aa18.25■□□□□ 0.51
PDLIM3-212ENST00000620787 OMA1Q96E52 524 aa18.25■□□□□ 0.51
PDLIM3-212ENST00000620787 CCDC120Q96HB5 630 aa18.25■□□□□ 0.51
PDLIM3-212ENST00000620787 MCHR1Q99705 422 aa18.25■□□□□ 0.51
PDLIM3-212ENST00000620787 E9PI62 339 aa18.25■□□□□ 0.51
PDLIM3-212ENST00000620787 FZD7O75084 574 aa18.25■□□□□ 0.51
PDLIM3-212ENST00000620787 LAG3P18627 525 aa18.25■□□□□ 0.51
PDLIM3-212ENST00000620787 PRKAR1BP31321 381 aa18.25■□□□□ 0.51
PDLIM3-212ENST00000620787 POU4F3Q15319 338 aa18.25■□□□□ 0.51
PDLIM3-212ENST00000620787 SLC25A35Q3KQZ1 300 aa18.25■□□□□ 0.51
PDLIM3-212ENST00000620787 ARL9Q6T311 187 aa18.25■□□□□ 0.51
PDLIM3-212ENST00000620787 MEPCEQ7L2J0 689 aaKnown RBP18.25■□□□□ 0.51
PDLIM3-212ENST00000620787 YIPF5Q969M3 257 aa18.25■□□□□ 0.51
PDLIM3-212ENST00000620787 MS4A3Q96HJ5 214 aa18.25■□□□□ 0.51
PDLIM3-212ENST00000620787 TRMT61BQ9BVS5 477 aaKnown RBP18.25■□□□□ 0.51
PDLIM3-212ENST00000620787 TRIM36Q9NQ86 728 aa18.25■□□□□ 0.51
PDLIM3-212ENST00000620787 TM7SF3Q9NS93 570 aa18.25■□□□□ 0.51
PDLIM3-212ENST00000620787 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.25■□□□□ 0.51
PDLIM3-212ENST00000620787 ATG4BQ9Y4P1 393 aa18.25■□□□□ 0.51
PDLIM3-212ENST00000620787 RPS10-NUDT3A0A1W2PQS6 291 aa18.24■□□□□ 0.51
PDLIM3-212ENST00000620787 CARNS1A5YM72 827 aa18.24■□□□□ 0.51
PDLIM3-212ENST00000620787 PAICSP22234 425 aaKnown RBP18.24■□□□□ 0.51
PDLIM3-212ENST00000620787 PRKACBP22694 351 aa18.24■□□□□ 0.51
PDLIM3-212ENST00000620787 GIFP27352 417 aa18.24■□□□□ 0.51
PDLIM3-212ENST00000620787 ARFIP1P53367 373 aa18.24■□□□□ 0.51
PDLIM3-212ENST00000620787 DBPQ10586 325 aaPredicted RBP18.24■□□□□ 0.51
PDLIM3-212ENST00000620787 SLC9A5Q14940 896 aa18.24■□□□□ 0.51
PDLIM3-212ENST00000620787 ZNF77Q15935 545 aa18.24■□□□□ 0.51
PDLIM3-212ENST00000620787 LGALSLQ3ZCW2 172 aaPredicted RBP18.24■□□□□ 0.51
PDLIM3-212ENST00000620787 GPR139Q6DWJ6 353 aa18.24■□□□□ 0.51
PDLIM3-212ENST00000620787 LUZP2Q86TE4 346 aa18.24■□□□□ 0.51
PDLIM3-212ENST00000620787 TPRA1Q86W33 373 aa18.24■□□□□ 0.51
PDLIM3-212ENST00000620787 FBXL6Q8N531 539 aa18.24■□□□□ 0.51
PDLIM3-212ENST00000620787 OR8K5Q8NH50 307 aa18.24■□□□□ 0.51
PDLIM3-212ENST00000620787 GANCQ8TET4 914 aa18.24■□□□□ 0.51
PDLIM3-212ENST00000620787 KISS1RQ969F8 398 aaPredicted RBP18.24■□□□□ 0.51
PDLIM3-212ENST00000620787 NACC2Q96BF6 587 aa18.24■□□□□ 0.51
PDLIM3-212ENST00000620787 MACROD1Q9BQ69 325 aa18.24■□□□□ 0.51
PDLIM3-212ENST00000620787 STON1Q9Y6Q2 735 aa18.24■□□□□ 0.51
PDLIM3-212ENST00000620787 EMC8O43402 210 aa18.24■□□□□ 0.51
PDLIM3-212ENST00000620787 MOSPD3O75425 235 aa18.24■□□□□ 0.51
PDLIM3-212ENST00000620787 OR5F1O95221 314 aa18.24■□□□□ 0.51
PDLIM3-212ENST00000620787 RPN2P04844 631 aa18.24■□□□□ 0.51
PDLIM3-212ENST00000620787 UBL4AP11441 157 aa18.24■□□□□ 0.51
PDLIM3-212ENST00000620787 MC3RP41968 323 aa18.24■□□□□ 0.51
PDLIM3-212ENST00000620787 GALEQ14376 348 aa18.24■□□□□ 0.51
PDLIM3-212ENST00000620787 C9orf64Q5T6V5 341 aa18.24■□□□□ 0.51
PDLIM3-212ENST00000620787 SIAH3Q8IW03 269 aa18.24■□□□□ 0.51
PDLIM3-212ENST00000620787 KREMEN2Q8NCW0 462 aa18.24■□□□□ 0.51
PDLIM3-212ENST00000620787 NUP43Q8NFH3 380 aa18.24■□□□□ 0.51
PDLIM3-212ENST00000620787 OR6C4Q8NGE1 309 aa18.24■□□□□ 0.51
PDLIM3-212ENST00000620787 DPCDQ9BVM2 203 aaPredicted RBP18.24■□□□□ 0.51
PDLIM3-212ENST00000620787 HCAR1Q9BXC0 346 aa18.24■□□□□ 0.51
PDLIM3-212ENST00000620787 HMX1Q9NP08 348 aaPredicted RBP18.24■□□□□ 0.51
PDLIM3-212ENST00000620787 NLGN3Q9NZ94 848 aa18.24■□□□□ 0.51
PDLIM3-212ENST00000620787 DAPL1A0PJW8 107 aa18.23■□□□□ 0.51
PDLIM3-212ENST00000620787 I3L521 148 aa18.23■□□□□ 0.51
PDLIM3-212ENST00000620787 FCMRO60667 390 aa18.23■□□□□ 0.51
PDLIM3-212ENST00000620787 AIFM1O95831 613 aa18.23■□□□□ 0.51
PDLIM3-212ENST00000620787 PRNPP04156 253 aa18.23■□□□□ 0.51
PDLIM3-212ENST00000620787 CD3GP09693 182 aa18.23■□□□□ 0.51
PDLIM3-212ENST00000620787 ZNF250P15622 560 aa18.23■□□□□ 0.51
PDLIM3-212ENST00000620787 POLR2CP19387 275 aaPredicted RBP18.23■□□□□ 0.51
PDLIM3-212ENST00000620787 VASPP50552 380 aaPredicted RBP18.23■□□□□ 0.51
PDLIM3-212ENST00000620787 FXYD6P3P58550 94 aa18.23■□□□□ 0.51
PDLIM3-212ENST00000620787 PRR5P85299 388 aa18.23■□□□□ 0.51
PDLIM3-212ENST00000620787 E2F1Q01094 437 aa18.23■□□□□ 0.51
PDLIM3-212ENST00000620787 CEACAM19Q7Z692 300 aa18.23■□□□□ 0.51
PDLIM3-212ENST00000620787 BPHLQ86WA6 291 aaPredicted RBP18.23■□□□□ 0.51
PDLIM3-212ENST00000620787 TOMM5Q8N4H5 51 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms