RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 PDSS1Q5T2R2 415 aa8.72□□□□□ -1.01
TARDBP-218ENST00000617172 CPTPQ5TA50 214 aa8.72□□□□□ -1.01
TARDBP-218ENST00000617172 BHLHB9Q6PI77 547 aa8.72□□□□□ -1.01
TARDBP-218ENST00000617172 APOOLQ6UXV4 268 aa8.72□□□□□ -1.01
TARDBP-218ENST00000617172 MTERF4Q7Z6M4 381 aaKnown RBP8.72□□□□□ -1.01
TARDBP-218ENST00000617172 NUDCD3Q8IVD9 361 aa8.72□□□□□ -1.01
TARDBP-218ENST00000617172 WDR75Q8IWA0 830 aaKnown RBP8.72□□□□□ -1.01
TARDBP-218ENST00000617172 KIRREL3Q8IZU9 778 aa8.72□□□□□ -1.01
TARDBP-218ENST00000617172 GTPBP8Q8N3Z3 284 aaPredicted RBP8.72□□□□□ -1.01
TARDBP-218ENST00000617172 METTL25Q8N6Q8 603 aa8.72□□□□□ -1.01
TARDBP-218ENST00000617172 COX18Q8N8Q8 333 aa8.72□□□□□ -1.01
TARDBP-218ENST00000617172 CNEP1R1Q8N9A8 125 aa8.72□□□□□ -1.01
TARDBP-218ENST00000617172 FNDC5Q8NAU1 212 aa8.72□□□□□ -1.01
TARDBP-218ENST00000617172 ZNF527Q8NB42 609 aa8.72□□□□□ -1.01
TARDBP-218ENST00000617172 OR56A1Q8NGH5 318 aa8.72□□□□□ -1.01
TARDBP-218ENST00000617172 CLHC1Q8NHS4 586 aa8.72□□□□□ -1.01
TARDBP-218ENST00000617172 PSMA8Q8TAA3 256 aa8.72□□□□□ -1.01
TARDBP-218ENST00000617172 AENQ8WTP8 325 aaKnown RBP8.72□□□□□ -1.01
TARDBP-218ENST00000617172 OR5P2Q8WZ92 322 aa8.72□□□□□ -1.01
TARDBP-218ENST00000617172 CAVIN3Q969G5 261 aa8.72□□□□□ -1.01
TARDBP-218ENST00000617172 ZBTB8AQ96BR9 441 aa8.72□□□□□ -1.01
TARDBP-218ENST00000617172 MOAP1Q96BY2 351 aa8.72□□□□□ -1.01
TARDBP-218ENST00000617172 COQ8BQ96D53 544 aa8.72□□□□□ -1.01
TARDBP-218ENST00000617172 FAM120BQ96EK7 910 aaKnown RBP8.72□□□□□ -1.01
TARDBP-218ENST00000617172 PGM2Q96G03 612 aa8.72□□□□□ -1.01
TARDBP-218ENST00000617172 ZIM3Q96PE6 472 aa8.72□□□□□ -1.01
TARDBP-218ENST00000617172 ALPK1Q96QP1 1244 aa8.72□□□□□ -1.01
TARDBP-218ENST00000617172 MECRQ9BV79 373 aa8.72□□□□□ -1.01
TARDBP-218ENST00000617172 PINK1Q9BXM7 581 aa8.72□□□□□ -1.01
TARDBP-218ENST00000617172 HOXD1Q9GZZ0 328 aa8.72□□□□□ -1.01
TARDBP-218ENST00000617172 PIGUQ9H490 435 aa8.72□□□□□ -1.01
TARDBP-218ENST00000617172 RNF122Q9H9V4 155 aa8.72□□□□□ -1.01
TARDBP-218ENST00000617172 NEUROD4Q9HD90 331 aa8.72□□□□□ -1.01
TARDBP-218ENST00000617172 ZCCHC3Q9NUD5 404 aaKnown RBP8.72□□□□□ -1.01
TARDBP-218ENST00000617172 ZNF226Q9NYT6 803 aa8.72□□□□□ -1.01
TARDBP-218ENST00000617172 EIF3LQ9Y262 564 aaKnown RBP8.72□□□□□ -1.01
TARDBP-218ENST00000617172 SNX8Q9Y5X2 465 aa8.72□□□□□ -1.01
TARDBP-218ENST00000617172 HIVEP1P15822 2718 aa8.72□□□□□ -1.01
TARDBP-218ENST00000617172 TEP1Q99973 2627 aaKnown RBP8.71□□□□□ -1.01
TARDBP-218ENST00000617172 FREM3P0C091 2139 aa8.71□□□□□ -1.01
TARDBP-218ENST00000617172 C17orf51A8MQB3 221 aa8.71□□□□□ -1.02
TARDBP-218ENST00000617172 H3BNH8 94 aa8.71□□□□□ -1.02
TARDBP-218ENST00000617172 ADAMDEC1O15204 470 aa8.71□□□□□ -1.02
TARDBP-218ENST00000617172 SEC14L5O43304 696 aa8.71□□□□□ -1.02
TARDBP-218ENST00000617172 CTIFO43310 598 aaKnown RBP8.71□□□□□ -1.02
TARDBP-218ENST00000617172 TYROBPO43914 113 aa8.71□□□□□ -1.02
TARDBP-218ENST00000617172 RAF1P04049 648 aa8.71□□□□□ -1.02
TARDBP-218ENST00000617172 HMGN2P05204 90 aaKnown RBP8.71□□□□□ -1.02
TARDBP-218ENST00000617172 CD8BP10966 210 aa8.71□□□□□ -1.02
TARDBP-218ENST00000617172 ACP2P11117 423 aa8.71□□□□□ -1.02
TARDBP-218ENST00000617172 LAMP1P11279 417 aa8.71□□□□□ -1.02
TARDBP-218ENST00000617172 CD99P14209 185 aa8.71□□□□□ -1.02
TARDBP-218ENST00000617172 ATP6V1C1P21283 382 aa8.71□□□□□ -1.02
TARDBP-218ENST00000617172 ME2P23368 584 aa8.71□□□□□ -1.02
TARDBP-218ENST00000617172 CD79BP40259 229 aa8.71□□□□□ -1.02
TARDBP-218ENST00000617172 EIF1P41567 113 aaKnown RBP8.71□□□□□ -1.02
TARDBP-218ENST00000617172 KIR2DL2P43627 348 aaPredicted RBP8.71□□□□□ -1.02
TARDBP-218ENST00000617172 ZNF41P51814 821 aaPredicted RBP8.71□□□□□ -1.02
TARDBP-218ENST00000617172 CLDN20P56880 219 aa8.71□□□□□ -1.02
TARDBP-218ENST00000617172 RAC1P63000 192 aa8.71□□□□□ -1.02
TARDBP-218ENST00000617172 TP53BP2Q13625 1128 aa8.71□□□□□ -1.02
TARDBP-218ENST00000617172 KEAP1Q14145 624 aa8.71□□□□□ -1.02
TARDBP-218ENST00000617172 PON3Q15166 354 aa8.71□□□□□ -1.02
TARDBP-218ENST00000617172 EXOSC6Q5RKV6 272 aaKnown RBP8.71□□□□□ -1.02
TARDBP-218ENST00000617172 IL23RQ5VWK5 629 aa8.71□□□□□ -1.02
TARDBP-218ENST00000617172 GTF2IRD2BQ6EKJ0 949 aa8.71□□□□□ -1.02
TARDBP-218ENST00000617172 CDC73Q6P1J9 531 aa8.71□□□□□ -1.02
TARDBP-218ENST00000617172 FIGNL1Q6PIW4 674 aa8.71□□□□□ -1.02
TARDBP-218ENST00000617172 PLXDC2Q6UX71 529 aa8.71□□□□□ -1.02
TARDBP-218ENST00000617172 ZCCHC23Q6ZST2 131 aa8.71□□□□□ -1.02
TARDBP-218ENST00000617172 FAM214BQ7L5A3 538 aa8.71□□□□□ -1.02
TARDBP-218ENST00000617172 BTLAQ7Z6A9 289 aa8.71□□□□□ -1.02
TARDBP-218ENST00000617172 GTF2IRD2Q86UP8 949 aa8.71□□□□□ -1.02
TARDBP-218ENST00000617172 MREGQ8N565 214 aa8.71□□□□□ -1.02
TARDBP-218ENST00000617172 OR7A2PQ8NGA2 310 aa8.71□□□□□ -1.02
TARDBP-218ENST00000617172 PPP1R14CQ8TAE6 165 aa8.71□□□□□ -1.02
TARDBP-218ENST00000617172 AGR3Q8TD06 166 aa8.71□□□□□ -1.02
TARDBP-218ENST00000617172 ADAMTS15Q8TE58 950 aa8.71□□□□□ -1.02
TARDBP-218ENST00000617172 FIG4Q92562 907 aa8.71□□□□□ -1.02
TARDBP-218ENST00000617172 JADE3Q92613 823 aa8.71□□□□□ -1.02
TARDBP-218ENST00000617172 TUBGCP3Q96CW5 907 aa8.71□□□□□ -1.02
TARDBP-218ENST00000617172 CHMP6Q96FZ7 201 aa8.71□□□□□ -1.02
TARDBP-218ENST00000617172 C16orf58Q96GQ5 468 aa8.71□□□□□ -1.02
TARDBP-218ENST00000617172 ZNF845Q96IR2 970 aaPredicted RBP8.71□□□□□ -1.02
TARDBP-218ENST00000617172 ACTRT3Q9BYD9 372 aa8.71□□□□□ -1.02
TARDBP-218ENST00000617172 PRRG4Q9BZD6 226 aa8.71□□□□□ -1.02
TARDBP-218ENST00000617172 BHLHE41Q9C0J9 482 aaPredicted RBP8.71□□□□□ -1.02
TARDBP-218ENST00000617172 LIME1Q9H400 295 aa8.71□□□□□ -1.02
TARDBP-218ENST00000617172 FANCFQ9NPI8 374 aa8.71□□□□□ -1.02
TARDBP-218ENST00000617172 GLRX2Q9NS18 164 aa8.71□□□□□ -1.02
TARDBP-218ENST00000617172 SIRT3Q9NTG7 399 aaPredicted RBP8.71□□□□□ -1.02
TARDBP-218ENST00000617172 ZDHHC2Q9UIJ5 367 aa8.71□□□□□ -1.02
TARDBP-218ENST00000617172 MCTS1Q9ULC4 181 aaKnown RBP8.71□□□□□ -1.02
TARDBP-218ENST00000617172 FAF1Q9UNN5 650 aaPredicted RBP8.71□□□□□ -1.02
TARDBP-218ENST00000617172 VDAC3Q9Y277 283 aa8.71□□□□□ -1.02
TARDBP-218ENST00000617172 PLEKHA6Q9Y2H5 1048 aa8.71□□□□□ -1.02
TARDBP-218ENST00000617172 ARHGAP21Q5T5U3 1957 aa8.71□□□□□ -1.02
TARDBP-218ENST00000617172 EXPH5Q8NEV8 1989 aa8.7□□□□□ -1.02
TARDBP-218ENST00000617172 UQCRHLA0A096LP55 91 aa8.7□□□□□ -1.02
TARDBP-218ENST00000617172 DUXAA6NLW8 204 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms