RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 PMEPA1Q969W9 287 aa7.21□□□□□ -1.25
NEK3-207ENST00000617054 CCDC74BQ96LY2 380 aa7.21□□□□□ -1.25
NEK3-207ENST00000617054 CD180Q99467 661 aa7.21□□□□□ -1.25
NEK3-207ENST00000617054 APOL4Q9BPW4 351 aa7.21□□□□□ -1.25
NEK3-207ENST00000617054 LHPPQ9H008 270 aa7.21□□□□□ -1.25
NEK3-207ENST00000617054 GPR83Q9NYM4 423 aa7.21□□□□□ -1.25
NEK3-207ENST00000617054 TAS2R16Q9NYV7 291 aa7.21□□□□□ -1.25
NEK3-207ENST00000617054 ACAD8Q9UKU7 415 aa7.21□□□□□ -1.25
NEK3-207ENST00000617054 POFUT2Q9Y2G5 429 aa7.21□□□□□ -1.25
NEK3-207ENST00000617054 CLCA3PQ9Y6N3 262 aa7.21□□□□□ -1.25
NEK3-207ENST00000617054 PRRC2CQ9Y520 2896 aaKnown RBP7.21□□□□□ -1.25
NEK3-207ENST00000617054 TEX51A0A1B0GUA7 166 aa7.21□□□□□ -1.26
NEK3-207ENST00000617054 H0YIG0 161 aa7.21□□□□□ -1.26
NEK3-207ENST00000617054 AP3D1O14617 1153 aa7.21□□□□□ -1.26
NEK3-207ENST00000617054 BRINP1O60477 761 aa7.21□□□□□ -1.26
NEK3-207ENST00000617054 FOXD2O60548 495 aaPredicted RBP7.21□□□□□ -1.26
NEK3-207ENST00000617054 FADS2O95864 444 aaKnown RBP7.21□□□□□ -1.26
NEK3-207ENST00000617054 FBLP22087 321 aaKnown RBP7.21□□□□□ -1.26
NEK3-207ENST00000617054 GGT2P36268 569 aa7.21□□□□□ -1.26
NEK3-207ENST00000617054 MAP3K8P41279 467 aa7.21□□□□□ -1.26
NEK3-207ENST00000617054 STT3AP46977 705 aa7.21□□□□□ -1.26
NEK3-207ENST00000617054 ALDH3B2P48448 385 aa7.21□□□□□ -1.26
NEK3-207ENST00000617054 ZNF136P52737 540 aa7.21□□□□□ -1.26
NEK3-207ENST00000617054 CRISP1P54107 249 aa7.21□□□□□ -1.26
NEK3-207ENST00000617054 EEF1A1P68104 462 aaKnown RBP7.21□□□□□ -1.26
NEK3-207ENST00000617054 DMRTA1Q5VZB9 504 aa7.21□□□□□ -1.26
NEK3-207ENST00000617054 ZNF730Q6ZMV8 503 aa7.21□□□□□ -1.26
NEK3-207ENST00000617054 GDF7Q7Z4P5 450 aa7.21□□□□□ -1.26
NEK3-207ENST00000617054 NRMQ8IXM6 262 aa7.21□□□□□ -1.26
NEK3-207ENST00000617054 DGCR14Q96DF8 476 aaKnown RBP7.21□□□□□ -1.26
NEK3-207ENST00000617054 PRRC1Q96M27 445 aa7.21□□□□□ -1.26
NEK3-207ENST00000617054 KLHDC3Q9BQ90 382 aa7.21□□□□□ -1.26
NEK3-207ENST00000617054 DUSP23Q9BVJ7 150 aa7.21□□□□□ -1.26
NEK3-207ENST00000617054 GABARAPL3Q9BY60 117 aa7.21□□□□□ -1.26
NEK3-207ENST00000617054 UCK2Q9BZX2 261 aa7.21□□□□□ -1.26
NEK3-207ENST00000617054 LRRN3Q9H3W5 708 aa7.21□□□□□ -1.26
NEK3-207ENST00000617054 ATP13A2Q9NQ11 1180 aa7.21□□□□□ -1.26
NEK3-207ENST00000617054 DUSP22Q9NRW4 184 aa7.21□□□□□ -1.26
NEK3-207ENST00000617054 MN1Q10571 1320 aaPredicted RBP7.21□□□□□ -1.26
NEK3-207ENST00000617054 A0A1W2PRQ8 180 aa7.21□□□□□ -1.26
NEK3-207ENST00000617054 TRIM64A6NGJ6 449 aa7.21□□□□□ -1.26
NEK3-207ENST00000617054 ARHGAP33O14559 1287 aa7.21□□□□□ -1.26
NEK3-207ENST00000617054 NKX2-2O95096 273 aa7.21□□□□□ -1.26
NEK3-207ENST00000617054 CLPSP04118 112 aa7.21□□□□□ -1.26
NEK3-207ENST00000617054 ADRA2AP08913 450 aa7.21□□□□□ -1.26
NEK3-207ENST00000617054 HSD17B7P56937 341 aa7.21□□□□□ -1.26
NEK3-207ENST00000617054 SKP1P63208 163 aa7.21□□□□□ -1.26
NEK3-207ENST00000617054 EMX1Q04741 257 aaPredicted RBP7.21□□□□□ -1.26
NEK3-207ENST00000617054 ZNF773Q6PK81 442 aa7.21□□□□□ -1.26
NEK3-207ENST00000617054 GPR141Q7Z602 305 aa7.21□□□□□ -1.26
NEK3-207ENST00000617054 ZNF615Q8N8J6 731 aa7.21□□□□□ -1.26
NEK3-207ENST00000617054 PFN4Q8NHR9 129 aa7.21□□□□□ -1.26
NEK3-207ENST00000617054 DIO2Q92813 273 aa7.21□□□□□ -1.26
NEK3-207ENST00000617054 SLC41A3Q96GZ6 507 aa7.21□□□□□ -1.26
NEK3-207ENST00000617054 NODALQ96S42 347 aa7.21□□□□□ -1.26
NEK3-207ENST00000617054 TSC22D3Q99576 134 aa7.21□□□□□ -1.26
NEK3-207ENST00000617054 ARHGDIGQ99819 225 aa7.21□□□□□ -1.26
NEK3-207ENST00000617054 FUZQ9BT04 418 aa7.21□□□□□ -1.26
NEK3-207ENST00000617054 DCUN1D5Q9BTE7 237 aa7.21□□□□□ -1.26
NEK3-207ENST00000617054 VN1R1Q9GZP7 353 aa7.21□□□□□ -1.26
NEK3-207ENST00000617054 FAM192AQ9GZU8 254 aa7.21□□□□□ -1.26
NEK3-207ENST00000617054 ZNF768Q9H5H4 540 aaKnown RBP7.21□□□□□ -1.26
NEK3-207ENST00000617054 RXFP3Q9NSD7 469 aa7.21□□□□□ -1.26
NEK3-207ENST00000617054 IMPAD1Q9NX62 359 aa7.21□□□□□ -1.26
NEK3-207ENST00000617054 KLHL28Q9NXS3 571 aa7.21□□□□□ -1.26
NEK3-207ENST00000617054 TVP23BQ9NYZ1 205 aa7.21□□□□□ -1.26
NEK3-207ENST00000617054 CALML5Q9NZT1 146 aa7.21□□□□□ -1.26
NEK3-207ENST00000617054 FTSJ1Q9UET6 329 aa7.21□□□□□ -1.26
NEK3-207ENST00000617054 SUSD2Q9UGT4 822 aa7.21□□□□□ -1.26
NEK3-207ENST00000617054 GPR52Q9Y2T5 361 aa7.21□□□□□ -1.26
NEK3-207ENST00000617054 CDC42EP2O14613 210 aa7.2□□□□□ -1.26
NEK3-207ENST00000617054 APOL3O95236 402 aa7.2□□□□□ -1.26
NEK3-207ENST00000617054 TP53P04637 393 aaPredicted RBP7.2□□□□□ -1.26
NEK3-207ENST00000617054 PRKAR1BP31321 381 aa7.2□□□□□ -1.26
NEK3-207ENST00000617054 ZNHIT3Q15649 155 aaPredicted RBP7.2□□□□□ -1.26
NEK3-207ENST00000617054 RBM48Q5RL73 367 aaKnown RBP7.2□□□□□ -1.26
NEK3-207ENST00000617054 BROXQ5VW32 411 aa7.2□□□□□ -1.26
NEK3-207ENST00000617054 ACSM5Q6NUN0 579 aa7.2□□□□□ -1.26
NEK3-207ENST00000617054 PTCHD4Q6ZW05 846 aa7.2□□□□□ -1.26
NEK3-207ENST00000617054 RRM2BQ7LG56 351 aa7.2□□□□□ -1.26
NEK3-207ENST00000617054 KIF18BQ86Y91 864 aa7.2□□□□□ -1.26
NEK3-207ENST00000617054 BCORP1Q8N888 145 aa7.2□□□□□ -1.26
NEK3-207ENST00000617054 NXF5Q9H1B4 397 aaKnown RBP7.2□□□□□ -1.26
NEK3-207ENST00000617054 C20orf141Q9NUB4 165 aa7.2□□□□□ -1.26
NEK3-207ENST00000617054 DNAJC27Q9NZQ0 273 aa7.2□□□□□ -1.26
NEK3-207ENST00000617054 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.2□□□□□ -1.26
NEK3-207ENST00000617054 PCNX3Q9H6A9 2034 aa7.2□□□□□ -1.26
NEK3-207ENST00000617054 AHCTF1Q8WYP5 2266 aa7.2□□□□□ -1.26
NEK3-207ENST00000617054 TNRC6BQ9UPQ9 1833 aaKnown RBP7.2□□□□□ -1.26
NEK3-207ENST00000617054 A0A1B0GX78 115 aa7.2□□□□□ -1.26
NEK3-207ENST00000617054 CDHR4A6H8M9 788 aa7.2□□□□□ -1.26
NEK3-207ENST00000617054 FAAHO00519 579 aa7.2□□□□□ -1.26
NEK3-207ENST00000617054 KIAA0513O60268 411 aa7.2□□□□□ -1.26
NEK3-207ENST00000617054 SCRG1O75711 98 aa7.2□□□□□ -1.26
NEK3-207ENST00000617054 MT-ND2P03891 347 aa7.2□□□□□ -1.26
NEK3-207ENST00000617054 CCL4P13236 92 aa7.2□□□□□ -1.26
NEK3-207ENST00000617054 NID1P14543 1247 aa7.2□□□□□ -1.26
NEK3-207ENST00000617054 SLC5A2P31639 672 aa7.2□□□□□ -1.26
NEK3-207ENST00000617054 UGT2B15P54855 530 aa7.2□□□□□ -1.26
NEK3-207ENST00000617054 LSM3P62310 102 aaKnown RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms