RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 ZNF764Q96H86 408 aaPredicted RBP18.63■□□□□ 0.57
TRAPPC3-208ENST00000616074 FCRL1Q96LA6 429 aa18.63■□□□□ 0.57
TRAPPC3-208ENST00000616074 Q96MF0 132 aa18.63■□□□□ 0.57
TRAPPC3-208ENST00000616074 RHOXF2Q9BQY4 288 aa18.63■□□□□ 0.57
TRAPPC3-208ENST00000616074 PRRG4Q9BZD6 226 aa18.63■□□□□ 0.57
TRAPPC3-208ENST00000616074 C1orf109Q9NX04 203 aa18.63■□□□□ 0.57
TRAPPC3-208ENST00000616074 ZANQ9Y493 2812 aa18.62■□□□□ 0.57
TRAPPC3-208ENST00000616074 SLC28A1O00337 649 aa18.62■□□□□ 0.57
TRAPPC3-208ENST00000616074 AKAP10O43572 662 aa18.62■□□□□ 0.57
TRAPPC3-208ENST00000616074 NDUFB5O43674 189 aa18.62■□□□□ 0.57
TRAPPC3-208ENST00000616074 SHBGP04278 402 aa18.62■□□□□ 0.57
TRAPPC3-208ENST00000616074 THBDP07204 575 aa18.62■□□□□ 0.57
TRAPPC3-208ENST00000616074 ACP2P11117 423 aa18.62■□□□□ 0.57
TRAPPC3-208ENST00000616074 SDC1P18827 310 aa18.62■□□□□ 0.57
TRAPPC3-208ENST00000616074 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.62■□□□□ 0.57
TRAPPC3-208ENST00000616074 CTU2Q2VPK5 515 aaKnown RBP18.62■□□□□ 0.57
TRAPPC3-208ENST00000616074 FIGNL1Q6PIW4 674 aa18.62■□□□□ 0.57
TRAPPC3-208ENST00000616074 C20orf204Q6ZNR8 217 aa18.62■□□□□ 0.57
TRAPPC3-208ENST00000616074 Q6ZSR9 355 aa18.62■□□□□ 0.57
TRAPPC3-208ENST00000616074 SZRD1Q7Z422 152 aa18.62■□□□□ 0.57
TRAPPC3-208ENST00000616074 YTHDF3Q7Z739 585 aaKnown RBP18.62■□□□□ 0.57
TRAPPC3-208ENST00000616074 ZAR1Q86SH2 424 aa18.62■□□□□ 0.57
TRAPPC3-208ENST00000616074 CCDC63Q8NA47 563 aa18.62■□□□□ 0.57
TRAPPC3-208ENST00000616074 OR6K3Q8NGY3 331 aa18.62■□□□□ 0.57
TRAPPC3-208ENST00000616074 OR10D3Q8NH80 312 aa18.62■□□□□ 0.57
TRAPPC3-208ENST00000616074 CEP70Q8NHQ1 597 aa18.62■□□□□ 0.57
TRAPPC3-208ENST00000616074 ZFP28Q8NHY6 868 aa18.62■□□□□ 0.57
TRAPPC3-208ENST00000616074 PPP1R14CQ8TAE6 165 aa18.62■□□□□ 0.57
TRAPPC3-208ENST00000616074 CAVIN3Q969G5 261 aa18.62■□□□□ 0.57
TRAPPC3-208ENST00000616074 PPCDCQ96CD2 204 aa18.62■□□□□ 0.57
TRAPPC3-208ENST00000616074 ADGRG7Q96K78 797 aa18.62■□□□□ 0.57
TRAPPC3-208ENST00000616074 TSSK3Q96PN8 268 aa18.62■□□□□ 0.57
TRAPPC3-208ENST00000616074 CCT7Q99832 543 aa18.62■□□□□ 0.57
TRAPPC3-208ENST00000616074 REEP4Q9H6H4 257 aa18.62■□□□□ 0.57
TRAPPC3-208ENST00000616074 PLSCR4Q9NRQ2 329 aa18.62■□□□□ 0.57
TRAPPC3-208ENST00000616074 EMC9Q9Y3B6 208 aa18.62■□□□□ 0.57
TRAPPC3-208ENST00000616074 A0A087WZY1 265 aa18.61■□□□□ 0.57
TRAPPC3-208ENST00000616074 UQCRHLA0A096LP55 91 aa18.61■□□□□ 0.57
TRAPPC3-208ENST00000616074 H7C1Q1 480 aa18.61■□□□□ 0.57
TRAPPC3-208ENST00000616074 RGS14O43566 566 aa18.61■□□□□ 0.57
TRAPPC3-208ENST00000616074 TBX19O60806 448 aa18.61■□□□□ 0.57
TRAPPC3-208ENST00000616074 SS18L1O75177 396 aaPredicted RBP18.61■□□□□ 0.57
TRAPPC3-208ENST00000616074 LY6G6DO95868 133 aa18.61■□□□□ 0.57
TRAPPC3-208ENST00000616074 PLGP00747 810 aaPredicted RBP18.61■□□□□ 0.57
TRAPPC3-208ENST00000616074 OPN1LWP04000 364 aa18.61■□□□□ 0.57
TRAPPC3-208ENST00000616074 NGFRP08138 427 aa18.61■□□□□ 0.57
TRAPPC3-208ENST00000616074 CPA3P15088 417 aa18.61■□□□□ 0.57
TRAPPC3-208ENST00000616074 CRHR1P34998 444 aa18.61■□□□□ 0.57
TRAPPC3-208ENST00000616074 FRKP42685 505 aaPredicted RBP18.61■□□□□ 0.57
TRAPPC3-208ENST00000616074 CCT5P48643 541 aa18.61■□□□□ 0.57
TRAPPC3-208ENST00000616074 SLC18A2Q05940 514 aa18.61■□□□□ 0.57
TRAPPC3-208ENST00000616074 LIPMQ5VYY2 423 aa18.61■□□□□ 0.57
TRAPPC3-208ENST00000616074 PRSS57Q6UWY2 283 aa18.61■□□□□ 0.57
TRAPPC3-208ENST00000616074 WDR75Q8IWA0 830 aaKnown RBP18.61■□□□□ 0.57
TRAPPC3-208ENST00000616074 GTPBP8Q8N3Z3 284 aaPredicted RBP18.61■□□□□ 0.57
TRAPPC3-208ENST00000616074 SLC16A11Q8NCK7 471 aa18.61■□□□□ 0.57
TRAPPC3-208ENST00000616074 CLHC1Q8NHS4 586 aa18.61■□□□□ 0.57
TRAPPC3-208ENST00000616074 FAM110BQ8TC76 370 aa18.61■□□□□ 0.57
TRAPPC3-208ENST00000616074 ZBED6CLQ96FA7 236 aaPredicted RBP18.61■□□□□ 0.57
TRAPPC3-208ENST00000616074 GMPPAQ96IJ6 420 aaPredicted RBP18.61■□□□□ 0.57
TRAPPC3-208ENST00000616074 MS4A4EQ96PG1 132 aa18.61■□□□□ 0.57
TRAPPC3-208ENST00000616074 FBXO34Q9NWN3 711 aa18.61■□□□□ 0.57
TRAPPC3-208ENST00000616074 SH3BP4Q9P0V3 963 aa18.61■□□□□ 0.57
TRAPPC3-208ENST00000616074 NTMQ9P121 344 aa18.61■□□□□ 0.57
TRAPPC3-208ENST00000616074 STOML1Q9UBI4 398 aa18.61■□□□□ 0.57
TRAPPC3-208ENST00000616074 FIS1Q9Y3D6 152 aa18.61■□□□□ 0.57
TRAPPC3-208ENST00000616074 ROS1P08922 2347 aa18.6■□□□□ 0.57
TRAPPC3-208ENST00000616074 A0A1W2PRB8 838 aa18.6■□□□□ 0.57
TRAPPC3-208ENST00000616074 FAM171A2A8MVW0 826 aa18.6■□□□□ 0.57
TRAPPC3-208ENST00000616074 AZIN1O14977 448 aa18.6■□□□□ 0.57
TRAPPC3-208ENST00000616074 CXCL13O43927 109 aa18.6■□□□□ 0.57
TRAPPC3-208ENST00000616074 KCNK2O95069 426 aa18.6■□□□□ 0.57
TRAPPC3-208ENST00000616074 PSMA4P25789 261 aaKnown RBP18.6■□□□□ 0.57
TRAPPC3-208ENST00000616074 MANFP55145 182 aaKnown RBP18.6■□□□□ 0.57
TRAPPC3-208ENST00000616074 CTBP2P56545 445 aa18.6■□□□□ 0.57
TRAPPC3-208ENST00000616074 RPL38P63173 70 aaKnown RBP18.6■□□□□ 0.57
TRAPPC3-208ENST00000616074 PDE7AQ13946 482 aa18.6■□□□□ 0.57
TRAPPC3-208ENST00000616074 DUSP5Q16690 384 aa18.6■□□□□ 0.57
TRAPPC3-208ENST00000616074 PLPPR5Q32ZL2 321 aa18.6■□□□□ 0.57
TRAPPC3-208ENST00000616074 RFTN2Q52LD8 501 aaPredicted RBP18.6■□□□□ 0.57
TRAPPC3-208ENST00000616074 ZBTB8AQ96BR9 441 aa18.6■□□□□ 0.57
TRAPPC3-208ENST00000616074 OTUB1Q96FW1 271 aaPredicted RBP18.6■□□□□ 0.57
TRAPPC3-208ENST00000616074 C16orf58Q96GQ5 468 aa18.6■□□□□ 0.57
TRAPPC3-208ENST00000616074 SH3YL1Q96HL8 342 aaPredicted RBP18.6■□□□□ 0.57
TRAPPC3-208ENST00000616074 RNF145Q96MT1 663 aa18.6■□□□□ 0.57
TRAPPC3-208ENST00000616074 KLHDC3Q9BQ90 382 aa18.6■□□□□ 0.57
TRAPPC3-208ENST00000616074 TUBB1Q9H4B7 451 aa18.6■□□□□ 0.57
TRAPPC3-208ENST00000616074 MED17Q9NVC6 651 aa18.6■□□□□ 0.57
TRAPPC3-208ENST00000616074 PAQR5Q9NXK6 330 aaPredicted RBP18.6■□□□□ 0.57
TRAPPC3-208ENST00000616074 BAIAP2L1Q9UHR4 511 aa18.6■□□□□ 0.57
TRAPPC3-208ENST00000616074 MCTS1Q9ULC4 181 aaKnown RBP18.6■□□□□ 0.57
TRAPPC3-208ENST00000616074 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.59■□□□□ 0.57
TRAPPC3-208ENST00000616074 C7orf72A4D263 438 aa18.59■□□□□ 0.57
TRAPPC3-208ENST00000616074 SMIM23A6NLE4 172 aa18.59■□□□□ 0.57
TRAPPC3-208ENST00000616074 COPEO14579 308 aa18.59■□□□□ 0.57
TRAPPC3-208ENST00000616074 TNFSF11O14788 317 aa18.59■□□□□ 0.57
TRAPPC3-208ENST00000616074 KLF4O43474 513 aa18.59■□□□□ 0.57
TRAPPC3-208ENST00000616074 IL11P20809 199 aa18.59■□□□□ 0.57
TRAPPC3-208ENST00000616074 EFNA1P20827 205 aaPredicted RBP18.59■□□□□ 0.57
TRAPPC3-208ENST00000616074 RAC1P63000 192 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms