RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 ADAM5Q6NVV9 412 aa8.81□□□□□ -1
COL12A1-211ENST00000615798 ERN2Q76MJ5 926 aaKnown RBP8.81□□□□□ -1
COL12A1-211ENST00000615798 COX18Q8N8Q8 333 aa8.81□□□□□ -1
COL12A1-211ENST00000615798 PECRQ9BY49 303 aa8.81□□□□□ -1
COL12A1-211ENST00000615798 TXLNGYQ9BZA5 131 aa8.81□□□□□ -1
COL12A1-211ENST00000615798 CLCF1Q9UBD9 225 aa8.81□□□□□ -1
COL12A1-211ENST00000615798 FBXW2Q9UKT8 454 aa8.81□□□□□ -1
COL12A1-211ENST00000615798 DOCK6Q96HP0 2047 aa8.81□□□□□ -1
COL12A1-211ENST00000615798 ACTL6BO94805 426 aa8.81□□□□□ -1
COL12A1-211ENST00000615798 PBX2P40425 430 aa8.81□□□□□ -1
COL12A1-211ENST00000615798 STEAP1BQ6NZ63 245 aa8.81□□□□□ -1
COL12A1-211ENST00000615798 TMCO2Q7Z6W1 182 aaPredicted RBP8.81□□□□□ -1
COL12A1-211ENST00000615798 GABRG1Q8N1C3 465 aa8.81□□□□□ -1
COL12A1-211ENST00000615798 ZMIZ2Q8NF64 920 aa8.81□□□□□ -1
COL12A1-211ENST00000615798 PROKR1Q8TCW9 393 aa8.81□□□□□ -1
COL12A1-211ENST00000615798 PSMG2Q969U7 264 aa8.81□□□□□ -1
COL12A1-211ENST00000615798 INTS14Q96SY0 518 aa8.81□□□□□ -1
COL12A1-211ENST00000615798 OSBPL2Q9H1P3 480 aa8.81□□□□□ -1
COL12A1-211ENST00000615798 KCNG2Q9UJ96 466 aa8.81□□□□□ -1
COL12A1-211ENST00000615798 WIF1Q9Y5W5 379 aa8.81□□□□□ -1
COL12A1-211ENST00000615798 CD300LBA8K4G0 201 aa8.81□□□□□ -1
COL12A1-211ENST00000615798 XRCC3O43542 346 aa8.81□□□□□ -1
COL12A1-211ENST00000615798 C5AR1P21730 350 aa8.81□□□□□ -1
COL12A1-211ENST00000615798 BMXP51813 675 aa8.81□□□□□ -1
COL12A1-211ENST00000615798 TAS2R46P59540 309 aa8.81□□□□□ -1
COL12A1-211ENST00000615798 REM2Q8IYK8 340 aaPredicted RBP8.81□□□□□ -1
COL12A1-211ENST00000615798 SCARB1Q8WTV0 552 aa8.81□□□□□ -1
COL12A1-211ENST00000615798 MYO19Q96H55 970 aa8.81□□□□□ -1
COL12A1-211ENST00000615798 PIMREGQ9BSJ6 248 aa8.81□□□□□ -1
COL12A1-211ENST00000615798 ACOT13Q9NPJ3 140 aa8.81□□□□□ -1
COL12A1-211ENST00000615798 PCDHB14Q9Y5E9 798 aa8.81□□□□□ -1
COL12A1-211ENST00000615798 SMIM30A4D0T7 59 aa8.8□□□□□ -1
COL12A1-211ENST00000615798 SLC31A1O15431 190 aa8.8□□□□□ -1
COL12A1-211ENST00000615798 PAGE1O75459 146 aa8.8□□□□□ -1
COL12A1-211ENST00000615798 ADRB3P13945 408 aa8.8□□□□□ -1
COL12A1-211ENST00000615798 HNRNPA2B1P22626 353 aaKnown RBP8.8□□□□□ -1
COL12A1-211ENST00000615798 MYF6P23409 242 aa8.8□□□□□ -1
COL12A1-211ENST00000615798 TNFSF9P41273 254 aa8.8□□□□□ -1
COL12A1-211ENST00000615798 CRISP3P54108 245 aa8.8□□□□□ -1
COL12A1-211ENST00000615798 IL20RBQ6UXL0 311 aa8.8□□□□□ -1
COL12A1-211ENST00000615798 PSMG3Q9BT73 122 aaPredicted RBP8.8□□□□□ -1
COL12A1-211ENST00000615798 SLAMF7Q9NQ25 335 aa8.8□□□□□ -1
COL12A1-211ENST00000615798 ASB3Q9Y575 518 aa8.8□□□□□ -1
COL12A1-211ENST00000615798 TMEM150BA6NC51 233 aa8.8□□□□□ -1
COL12A1-211ENST00000615798 HTRA2O43464 458 aaPredicted RBP8.8□□□□□ -1
COL12A1-211ENST00000615798 SMAD3P84022 425 aaKnown RBP8.8□□□□□ -1
COL12A1-211ENST00000615798 MAJINQ3KP22 176 aa8.8□□□□□ -1
COL12A1-211ENST00000615798 AWAT2Q6E213 333 aa8.8□□□□□ -1
COL12A1-211ENST00000615798 Q6ZN92 141 aa8.8□□□□□ -1
COL12A1-211ENST00000615798 PDZD7Q9H5P4 517 aa8.8□□□□□ -1
COL12A1-211ENST00000615798 PIGVQ9NUD9 493 aa8.8□□□□□ -1
COL12A1-211ENST00000615798 SLC39A9Q9NUM3 307 aa8.8□□□□□ -1
COL12A1-211ENST00000615798 AHDC1Q5TGY3 1603 aaPredicted RBP8.8□□□□□ -1
COL12A1-211ENST00000615798 UMAD1C9J7I0 102 aa8.8□□□□□ -1
COL12A1-211ENST00000615798 SURF4O15260 269 aa8.8□□□□□ -1
COL12A1-211ENST00000615798 BCL6P41182 706 aa8.8□□□□□ -1
COL12A1-211ENST00000615798 MASP1P48740 699 aa8.8□□□□□ -1
COL12A1-211ENST00000615798 DNAJB13P59910 316 aa8.8□□□□□ -1
COL12A1-211ENST00000615798 SLC25A11Q02978 314 aaKnown RBP8.8□□□□□ -1
COL12A1-211ENST00000615798 VGLL4Q14135 290 aa8.8□□□□□ -1
COL12A1-211ENST00000615798 ETFDHQ16134 617 aa8.8□□□□□ -1
COL12A1-211ENST00000615798 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.8□□□□□ -1
COL12A1-211ENST00000615798 RHBDF2Q6PJF5 856 aa8.8□□□□□ -1
COL12A1-211ENST00000615798 FAM86B1Q8N7N1 296 aa8.8□□□□□ -1
COL12A1-211ENST00000615798 LMO3Q8TAP4 145 aa8.8□□□□□ -1
COL12A1-211ENST00000615798 THEM6Q8WUY1 208 aa8.8□□□□□ -1
COL12A1-211ENST00000615798 ZUFSPQ96AP4 578 aa8.8□□□□□ -1
COL12A1-211ENST00000615798 RBM18Q96H35 190 aaKnown RBP8.8□□□□□ -1
COL12A1-211ENST00000615798 FZD4Q9ULV1 537 aa8.8□□□□□ -1
COL12A1-211ENST00000615798 ARAP2Q8WZ64 1704 aa8.8□□□□□ -1
COL12A1-211ENST00000615798 LAMB1P07942 1786 aa8.8□□□□□ -1
COL12A1-211ENST00000615798 OOEPA6NGQ2 149 aa8.8□□□□□ -1
COL12A1-211ENST00000615798 NUDT3O95989 172 aa8.8□□□□□ -1
COL12A1-211ENST00000615798 GSRP00390 522 aa8.8□□□□□ -1
COL12A1-211ENST00000615798 FOLR1P15328 257 aa8.8□□□□□ -1
COL12A1-211ENST00000615798 GGT1P19440 569 aa8.8□□□□□ -1
COL12A1-211ENST00000615798 EPHA1P21709 976 aa8.8□□□□□ -1
COL12A1-211ENST00000615798 RBMS1P29558 406 aaKnown RBP8.8□□□□□ -1
COL12A1-211ENST00000615798 IL10RBQ08334 325 aa8.8□□□□□ -1
COL12A1-211ENST00000615798 KCNAB2Q13303 367 aa8.8□□□□□ -1
COL12A1-211ENST00000615798 FBXO48Q5FWF7 155 aa8.8□□□□□ -1
COL12A1-211ENST00000615798 UBE2NLQ5JXB2 153 aa8.8□□□□□ -1
COL12A1-211ENST00000615798 BRIX1Q8TDN6 353 aaKnown RBP8.8□□□□□ -1
COL12A1-211ENST00000615798 UBTD2Q8WUN7 234 aa8.8□□□□□ -1
COL12A1-211ENST00000615798 EDEM1Q92611 657 aa8.8□□□□□ -1
COL12A1-211ENST00000615798 FKBP10Q96AY3 582 aa8.8□□□□□ -1
COL12A1-211ENST00000615798 POM121Q96HA1 1249 aa8.8□□□□□ -1
COL12A1-211ENST00000615798 AK3Q9UIJ7 227 aa8.8□□□□□ -1
COL12A1-211ENST00000615798 FZD10Q9ULW2 581 aa8.8□□□□□ -1
COL12A1-211ENST00000615798 Q9Y3F1 56 aa8.8□□□□□ -1
COL12A1-211ENST00000615798 NT5EP21589 574 aa8.8□□□□□ -1
COL12A1-211ENST00000615798 AHCYP23526 432 aa8.8□□□□□ -1
COL12A1-211ENST00000615798 PRDX3P30048 256 aaKnown RBP8.8□□□□□ -1
COL12A1-211ENST00000615798 SLC5A2P31639 672 aa8.8□□□□□ -1
COL12A1-211ENST00000615798 PTGER3P43115 390 aa8.8□□□□□ -1
COL12A1-211ENST00000615798 PLP1P60201 277 aa8.8□□□□□ -1
COL12A1-211ENST00000615798 INPP5JQ15735 1006 aaPredicted RBP8.8□□□□□ -1
COL12A1-211ENST00000615798 SLC35F1Q5T1Q4 408 aa8.8□□□□□ -1
COL12A1-211ENST00000615798 MAMDC4Q6UXC1 1216 aa8.8□□□□□ -1
COL12A1-211ENST00000615798 NPNTQ6UXI9 565 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms