RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 CDC73Q6P1J9 531 aa13.12□□□□□ -0.31
COL6A1-207ENST00000612273 VITQ6UXI7 678 aa13.12□□□□□ -0.31
COL6A1-207ENST00000612273 ARL14Q8N4G2 192 aa13.12□□□□□ -0.31
COL6A1-207ENST00000612273 RAB42Q8N4Z0 105 aa13.12□□□□□ -0.31
COL6A1-207ENST00000612273 OR4M1Q8NGD0 313 aa13.12□□□□□ -0.31
COL6A1-207ENST00000612273 DIO2Q92813 273 aa13.12□□□□□ -0.31
COL6A1-207ENST00000612273 IFT27Q9BW83 186 aa13.12□□□□□ -0.31
COL6A1-207ENST00000612273 PELI2Q9HAT8 420 aa13.12□□□□□ -0.31
COL6A1-207ENST00000612273 WASH6PQ9NQA3 447 aa13.12□□□□□ -0.31
COL6A1-207ENST00000612273 PRDM7Q9NQW5 492 aa13.12□□□□□ -0.31
COL6A1-207ENST00000612273 ENAMQ9NRM1 1142 aa13.12□□□□□ -0.31
COL6A1-207ENST00000612273 ASB4Q9Y574 426 aa13.12□□□□□ -0.31
COL6A1-207ENST00000612273 SEC16AO15027 2179 aa13.11□□□□□ -0.31
COL6A1-207ENST00000612273 PEX12O00623 359 aa13.11□□□□□ -0.31
COL6A1-207ENST00000612273 SURF4O15260 269 aa13.11□□□□□ -0.31
COL6A1-207ENST00000612273 SCO2O43819 266 aa13.11□□□□□ -0.31
COL6A1-207ENST00000612273 DRD5P21918 477 aa13.11□□□□□ -0.31
COL6A1-207ENST00000612273 RPS5P46782 204 aaKnown RBP13.11□□□□□ -0.31
COL6A1-207ENST00000612273 PGGHGQ32M88 737 aa13.11□□□□□ -0.31
COL6A1-207ENST00000612273 FAM78AQ5JUQ0 283 aa13.11□□□□□ -0.31
COL6A1-207ENST00000612273 BHLHB9Q6PI77 547 aa13.11□□□□□ -0.31
COL6A1-207ENST00000612273 OR2T33Q8NG76 320 aa13.11□□□□□ -0.31
COL6A1-207ENST00000612273 RFKQ969G6 155 aa13.11□□□□□ -0.31
COL6A1-207ENST00000612273 LINC00615Q96LM1 132 aaPredicted RBP13.11□□□□□ -0.31
COL6A1-207ENST00000612273 RIPOR3Q96MK2 946 aa13.11□□□□□ -0.31
COL6A1-207ENST00000612273 ALG8Q9BVK2 526 aa13.11□□□□□ -0.31
COL6A1-207ENST00000612273 RBCK1Q9BYM8 510 aa13.11□□□□□ -0.31
COL6A1-207ENST00000612273 UBQLN3Q9H347 655 aa13.11□□□□□ -0.31
COL6A1-207ENST00000612273 EIF4EP06730 217 aaKnown RBP13.11□□□□□ -0.31
COL6A1-207ENST00000612273 PYCR1P32322 319 aa13.11□□□□□ -0.31
COL6A1-207ENST00000612273 IRF4Q15306 451 aa13.11□□□□□ -0.31
COL6A1-207ENST00000612273 FCN2Q15485 313 aa13.11□□□□□ -0.31
COL6A1-207ENST00000612273 MAPK14Q16539 360 aa13.11□□□□□ -0.31
COL6A1-207ENST00000612273 GXYLT1Q4G148 440 aa13.11□□□□□ -0.31
COL6A1-207ENST00000612273 C2orf27AQ580R0 203 aa13.11□□□□□ -0.31
COL6A1-207ENST00000612273 KIAA0907Q7Z7F0 614 aaPredicted RBP13.11□□□□□ -0.31
COL6A1-207ENST00000612273 TEX12Q9BXU0 123 aa13.11□□□□□ -0.31
COL6A1-207ENST00000612273 OR52D1Q9H346 318 aa13.11□□□□□ -0.31
COL6A1-207ENST00000612273 ING3Q9NXR8 418 aa13.11□□□□□ -0.31
COL6A1-207ENST00000612273 CBLCQ9ULV8 474 aa13.11□□□□□ -0.31
COL6A1-207ENST00000612273 A0A0G2JPF8 293 aa13.1□□□□□ -0.31
COL6A1-207ENST00000612273 HNRNPCL2B2RXH8 293 aa13.1□□□□□ -0.31
COL6A1-207ENST00000612273 HNRNPCL3B7ZW38 293 aa13.1□□□□□ -0.31
COL6A1-207ENST00000612273 C1QTNF3-AMACRE9PGA6 284 aa13.1□□□□□ -0.31
COL6A1-207ENST00000612273 FABP7O15540 132 aa13.1□□□□□ -0.31
COL6A1-207ENST00000612273 ZNF888P0CJ79 500 aaPredicted RBP13.1□□□□□ -0.31
COL6A1-207ENST00000612273 HNRNPCL4P0DMR1 293 aa13.1□□□□□ -0.31
COL6A1-207ENST00000612273 DRD2P14416 443 aa13.1□□□□□ -0.31
COL6A1-207ENST00000612273 UQCRC1P31930 480 aa13.1□□□□□ -0.31
COL6A1-207ENST00000612273 TALDO1P37837 337 aa13.1□□□□□ -0.31
COL6A1-207ENST00000612273 SLC25A35Q3KQZ1 300 aa13.1□□□□□ -0.31
COL6A1-207ENST00000612273 YIF1BQ5BJH7 314 aa13.1□□□□□ -0.31
COL6A1-207ENST00000612273 ZNF322Q6U7Q0 402 aaPredicted RBP13.1□□□□□ -0.31
COL6A1-207ENST00000612273 CEACAM19Q7Z692 300 aa13.1□□□□□ -0.31
COL6A1-207ENST00000612273 AMIGO1Q86WK6 493 aa13.1□□□□□ -0.31
COL6A1-207ENST00000612273 C17orf47Q8NEP4 570 aa13.1□□□□□ -0.31
COL6A1-207ENST00000612273 OR13C2Q8NGS9 318 aa13.1□□□□□ -0.31
COL6A1-207ENST00000612273 OR5H6Q8NGV6 325 aa13.1□□□□□ -0.31
COL6A1-207ENST00000612273 PINK1Q9BXM7 581 aa13.1□□□□□ -0.31
COL6A1-207ENST00000612273 MCOLN1Q9GZU1 580 aa13.1□□□□□ -0.31
COL6A1-207ENST00000612273 MKRN2Q9H000 416 aaKnown RBP13.1□□□□□ -0.31
COL6A1-207ENST00000612273 CACYBPQ9HB71 228 aaKnown RBP13.1□□□□□ -0.31
COL6A1-207ENST00000612273 EMC8O43402 210 aa13.1□□□□□ -0.31
COL6A1-207ENST00000612273 PRKNO60260 465 aaPredicted RBP13.1□□□□□ -0.31
COL6A1-207ENST00000612273 EML2O95834 649 aa13.1□□□□□ -0.31
COL6A1-207ENST00000612273 BMP7P18075 431 aa13.1□□□□□ -0.31
COL6A1-207ENST00000612273 NDUFV2P19404 249 aa13.1□□□□□ -0.31
COL6A1-207ENST00000612273 SSTR2P30874 369 aa13.1□□□□□ -0.31
COL6A1-207ENST00000612273 MAGEB1P43366 347 aa13.1□□□□□ -0.31
COL6A1-207ENST00000612273 OR12D2P58182 307 aa13.1□□□□□ -0.31
COL6A1-207ENST00000612273 DPTQ07507 201 aa13.1□□□□□ -0.31
COL6A1-207ENST00000612273 FGL2Q14314 439 aa13.1□□□□□ -0.31
COL6A1-207ENST00000612273 GPR176Q14439 515 aa13.1□□□□□ -0.31
COL6A1-207ENST00000612273 NNATQ16517 81 aa13.1□□□□□ -0.31
COL6A1-207ENST00000612273 PUS10Q3MIT2 529 aaKnown RBP13.1□□□□□ -0.31
COL6A1-207ENST00000612273 AADACL4Q5VUY2 407 aa13.1□□□□□ -0.31
COL6A1-207ENST00000612273 PRSS45Q7RTY3 260 aa13.1□□□□□ -0.31
COL6A1-207ENST00000612273 GPR135Q8IZ08 494 aa13.1□□□□□ -0.31
COL6A1-207ENST00000612273 ACBD7Q8N6N7 88 aa13.1□□□□□ -0.31
COL6A1-207ENST00000612273 CCL4L1Q8NHW4 92 aa13.1□□□□□ -0.31
COL6A1-207ENST00000612273 HMGB4Q8WW32 186 aa13.1□□□□□ -0.31
COL6A1-207ENST00000612273 ACOT11Q8WXI4 607 aaPredicted RBP13.1□□□□□ -0.31
COL6A1-207ENST00000612273 ORAI3Q9BRQ5 295 aa13.1□□□□□ -0.31
COL6A1-207ENST00000612273 TMEM43Q9BTV4 400 aa13.1□□□□□ -0.31
COL6A1-207ENST00000612273 PAK6Q9NQU5 681 aaPredicted RBP13.1□□□□□ -0.31
COL6A1-207ENST00000612273 LIPT1Q9Y234 373 aa13.1□□□□□ -0.31
COL6A1-207ENST00000612273 OBSL1O75147 1896 aa13.1□□□□□ -0.31
COL6A1-207ENST00000612273 TRDV1A0A1B0GX56 115 aa13.1□□□□□ -0.31
COL6A1-207ENST00000612273 ORC5O43913 435 aa13.1□□□□□ -0.31
COL6A1-207ENST00000612273 CLEC3AO75596 197 aa13.1□□□□□ -0.31
COL6A1-207ENST00000612273 TEAD1P28347 426 aa13.1□□□□□ -0.31
COL6A1-207ENST00000612273 DRD3P35462 400 aa13.1□□□□□ -0.31
COL6A1-207ENST00000612273 FRKP42685 505 aaPredicted RBP13.1□□□□□ -0.31
COL6A1-207ENST00000612273 ABATP80404 500 aa13.1□□□□□ -0.31
COL6A1-207ENST00000612273 SGCGQ13326 291 aa13.1□□□□□ -0.31
COL6A1-207ENST00000612273 EXOSC7Q15024 291 aaKnown RBP13.1□□□□□ -0.31
COL6A1-207ENST00000612273 DUSP5Q16690 384 aa13.1□□□□□ -0.31
COL6A1-207ENST00000612273 THSD4Q6ZMP0 1018 aa13.1□□□□□ -0.31
COL6A1-207ENST00000612273 RASSF6Q6ZTQ3 369 aa13.1□□□□□ -0.31
COL6A1-207ENST00000612273 BTBD1Q9H0C5 482 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms