RNA–Protein interactions for RNA: ENST00000611963.4

TARDBP-213, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-213ENST00000611963 MTHFD2LQ9H903 347 aaPredicted RBP7.47□□□□□ -1.21
TARDBP-213ENST00000611963 LIN28AQ9H9Z2 209 aaKnown RBP7.47□□□□□ -1.21
TARDBP-213ENST00000611963 SMURF2Q9HAU4 748 aa7.47□□□□□ -1.21
TARDBP-213ENST00000611963 CACYBPQ9HB71 228 aaKnown RBP7.47□□□□□ -1.21
TARDBP-213ENST00000611963 THSD1Q9NS62 852 aa7.47□□□□□ -1.21
TARDBP-213ENST00000611963 RLIMQ9NVW2 624 aa7.47□□□□□ -1.21
TARDBP-213ENST00000611963 FLRT3Q9NZU0 649 aa7.47□□□□□ -1.21
TARDBP-213ENST00000611963 RHCGQ9UBD6 479 aa7.47□□□□□ -1.21
TARDBP-213ENST00000611963 ZNF223Q9UK11 482 aaPredicted RBP7.47□□□□□ -1.21
TARDBP-213ENST00000611963 SLC13A4Q9UKG4 626 aa7.47□□□□□ -1.21
TARDBP-213ENST00000611963 NXT1Q9UKK6 140 aaKnown RBP7.47□□□□□ -1.21
TARDBP-213ENST00000611963 PADI1Q9ULC6 663 aa7.47□□□□□ -1.21
TARDBP-213ENST00000611963 CFL2Q9Y281 166 aa7.47□□□□□ -1.21
TARDBP-213ENST00000611963 SLC9A8Q9Y2E8 581 aa7.47□□□□□ -1.21
TARDBP-213ENST00000611963 NTNG1Q9Y2I2 539 aa7.47□□□□□ -1.21
TARDBP-213ENST00000611963 PADI2Q9Y2J8 665 aa7.47□□□□□ -1.21
TARDBP-213ENST00000611963 SAMHD1Q9Y3Z3 626 aaKnown RBP7.47□□□□□ -1.21
TARDBP-213ENST00000611963 LRRC42Q9Y546 428 aa7.47□□□□□ -1.21
TARDBP-213ENST00000611963 ANKRD11Q6UB99 2663 aaPredicted RBP7.47□□□□□ -1.21
TARDBP-213ENST00000611963 CPAMD8Q8IZJ3 1885 aa7.47□□□□□ -1.21
TARDBP-213ENST00000611963 PCSK5Q92824 1860 aa7.47□□□□□ -1.21
TARDBP-213ENST00000611963 URB1O60287 2271 aaKnown RBP7.47□□□□□ -1.21
TARDBP-213ENST00000611963 FREM3P0C091 2139 aa7.46□□□□□ -1.21
TARDBP-213ENST00000611963 DSPP15924 2871 aaKnown RBP7.46□□□□□ -1.21
TARDBP-213ENST00000611963 FAM208BQ5VWN6 2430 aa7.46□□□□□ -1.22
TARDBP-213ENST00000611963 TRBV11-1A0A0K0K1C0 115 aa7.46□□□□□ -1.22
TARDBP-213ENST00000611963 CDC14CA4D256 554 aa7.46□□□□□ -1.22
TARDBP-213ENST00000611963 C7orf72A4D263 438 aa7.46□□□□□ -1.22
TARDBP-213ENST00000611963 SYNDIG1LA6NDD5 238 aa7.46□□□□□ -1.22
TARDBP-213ENST00000611963 FRG2CA6NGY1 282 aa7.46□□□□□ -1.22
TARDBP-213ENST00000611963 TTC36A6NLP5 189 aa7.46□□□□□ -1.22
TARDBP-213ENST00000611963 G3V2T6 193 aa7.46□□□□□ -1.22
TARDBP-213ENST00000611963 ERVH48-1M5A8F1 160 aa7.46□□□□□ -1.22
TARDBP-213ENST00000611963 TNFRSF11BO00300 401 aa7.46□□□□□ -1.22
TARDBP-213ENST00000611963 SYT5O00445 386 aa7.46□□□□□ -1.22
TARDBP-213ENST00000611963 FFAR1O14842 300 aa7.46□□□□□ -1.22
TARDBP-213ENST00000611963 SEMA7AO75326 666 aa7.46□□□□□ -1.22
TARDBP-213ENST00000611963 KLF7O75840 302 aaPredicted RBP7.46□□□□□ -1.22
TARDBP-213ENST00000611963 DNAJB5O75953 348 aa7.46□□□□□ -1.22
TARDBP-213ENST00000611963 DBIP07108 87 aaKnown RBP7.46□□□□□ -1.22
TARDBP-213ENST00000611963 CELA2AP08217 269 aa7.46□□□□□ -1.22
TARDBP-213ENST00000611963 IL7RP16871 459 aa7.46□□□□□ -1.22
TARDBP-213ENST00000611963 RHCEP18577 417 aa7.46□□□□□ -1.22
TARDBP-213ENST00000611963 FPR1P21462 350 aa7.46□□□□□ -1.22
TARDBP-213ENST00000611963 PRKACGP22612 351 aa7.46□□□□□ -1.22
TARDBP-213ENST00000611963 PRKAR1BP31321 381 aa7.46□□□□□ -1.22
TARDBP-213ENST00000611963 DNAJA1P31689 397 aaKnown RBP7.46□□□□□ -1.22
TARDBP-213ENST00000611963 FOLR3P41439 243 aa7.46□□□□□ -1.22
TARDBP-213ENST00000611963 PPICP45877 212 aa7.46□□□□□ -1.22
TARDBP-213ENST00000611963 NR0B1P51843 470 aaKnown RBP7.46□□□□□ -1.22
TARDBP-213ENST00000611963 SLC26A5P58743 744 aa7.46□□□□□ -1.22
TARDBP-213ENST00000611963 EEF1A1P68104 462 aaKnown RBP7.46□□□□□ -1.22
TARDBP-213ENST00000611963 DAG1Q14118 895 aa7.46□□□□□ -1.22
TARDBP-213ENST00000611963 PCOLCEQ15113 449 aa7.46□□□□□ -1.22
TARDBP-213ENST00000611963 COL28A1Q2UY09 1125 aa7.46□□□□□ -1.22
TARDBP-213ENST00000611963 LIN52Q52LA3 116 aa7.46□□□□□ -1.22
TARDBP-213ENST00000611963 EIPR1Q53HC9 387 aa7.46□□□□□ -1.22
TARDBP-213ENST00000611963 C6orf52Q5T4I8 152 aa7.46□□□□□ -1.22
TARDBP-213ENST00000611963 MRPL2Q5T653 305 aaKnown RBP7.46□□□□□ -1.22
TARDBP-213ENST00000611963 HLA-DQA1Q5Y7H0 255 aa7.46□□□□□ -1.22
TARDBP-213ENST00000611963 SHQ1Q6PI26 577 aaKnown RBP7.46□□□□□ -1.22
TARDBP-213ENST00000611963 ZNF605Q86T29 641 aa7.46□□□□□ -1.22
TARDBP-213ENST00000611963 TSPYL5Q86VY4 417 aaPredicted RBP7.46□□□□□ -1.22
TARDBP-213ENST00000611963 ZDHHC13Q8IUH4 622 aa7.46□□□□□ -1.22
TARDBP-213ENST00000611963 SVOPLQ8N434 492 aa7.46□□□□□ -1.22
TARDBP-213ENST00000611963 ZNF441Q8N8Z8 693 aa7.46□□□□□ -1.22
TARDBP-213ENST00000611963 B3GNT7Q8NFL0 401 aa7.46□□□□□ -1.22
TARDBP-213ENST00000611963 OR4C15Q8NGM1 316 aa7.46□□□□□ -1.22
TARDBP-213ENST00000611963 OR6T1Q8NGN1 323 aa7.46□□□□□ -1.22
TARDBP-213ENST00000611963 OR2Y1Q8NGV0 311 aa7.46□□□□□ -1.22
TARDBP-213ENST00000611963 THAP3Q8WTV1 239 aaPredicted RBP7.46□□□□□ -1.22
TARDBP-213ENST00000611963 SDCCAG3Q96C92 435 aa7.46□□□□□ -1.22
TARDBP-213ENST00000611963 CRELD1Q96HD1 420 aa7.46□□□□□ -1.22
TARDBP-213ENST00000611963 LCORQ96JN0 433 aaPredicted RBP7.46□□□□□ -1.22
TARDBP-213ENST00000611963 ZNF570Q96NI8 536 aa7.46□□□□□ -1.22
TARDBP-213ENST00000611963 ZNF347Q96SE7 839 aa7.46□□□□□ -1.22
TARDBP-213ENST00000611963 LPAR4Q99677 370 aa7.46□□□□□ -1.22
TARDBP-213ENST00000611963 PIP5K1AQ99755 562 aa7.46□□□□□ -1.22
TARDBP-213ENST00000611963 SPRY4Q9C004 299 aa7.46□□□□□ -1.22
TARDBP-213ENST00000611963 TRIM45Q9H8W5 580 aaPredicted RBP7.46□□□□□ -1.22
TARDBP-213ENST00000611963 REEP1Q9H902 201 aa7.46□□□□□ -1.22
TARDBP-213ENST00000611963 CTPS2Q9NRF8 586 aa7.46□□□□□ -1.22
TARDBP-213ENST00000611963 POLE3Q9NRF9 147 aa7.46□□□□□ -1.22
TARDBP-213ENST00000611963 C19orf25Q9UFG5 118 aaPredicted RBP7.46□□□□□ -1.22
TARDBP-213ENST00000611963 ZNF232Q9UNY5 417 aa7.46□□□□□ -1.22
TARDBP-213ENST00000611963 IFT52Q9Y366 437 aa7.46□□□□□ -1.22
TARDBP-213ENST00000611963 FAM32AQ9Y421 112 aaKnown RBP7.46□□□□□ -1.22
TARDBP-213ENST00000611963 PCDHGA3Q9Y5H0 932 aa7.46□□□□□ -1.22
TARDBP-213ENST00000611963 LYVE1Q9Y5Y7 322 aa7.46□□□□□ -1.22
TARDBP-213ENST00000611963 ZFYVE26Q68DK2 2539 aa7.46□□□□□ -1.22
TARDBP-213ENST00000611963 LOC102723996A0A087X1L8 192 aa7.45□□□□□ -1.22
TARDBP-213ENST00000611963 TRBV4-1A0A0J9YWV2 114 aa7.45□□□□□ -1.22
TARDBP-213ENST00000611963 OR6C76A6NM76 312 aa7.45□□□□□ -1.22
TARDBP-213ENST00000611963 NPIPB9F8W1W9 429 aa7.45□□□□□ -1.22
TARDBP-213ENST00000611963 MASP2O00187 686 aa7.45□□□□□ -1.22
TARDBP-213ENST00000611963 DLGAP1O14490 977 aa7.45□□□□□ -1.22
TARDBP-213ENST00000611963 ADAMDEC1O15204 470 aa7.45□□□□□ -1.22
TARDBP-213ENST00000611963 TPST2O60704 377 aa7.45□□□□□ -1.22
TARDBP-213ENST00000611963 DPM1O60762 260 aa7.45□□□□□ -1.22
TARDBP-213ENST00000611963 MITFO75030 526 aaPredicted RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms