RNA–Protein interactions for RNA: ENST00000607092.1

CUX1-220, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-220ENST00000607092 ADAMDEC1O15204 470 aa5.63□□□□□ -1.51
CUX1-220ENST00000607092 CLOCKO15516 846 aa5.63□□□□□ -1.51
CUX1-220ENST00000607092 NDUFB5O43674 189 aa5.63□□□□□ -1.51
CUX1-220ENST00000607092 PCDH7O60245 1069 aa5.63□□□□□ -1.51
CUX1-220ENST00000607092 PIAS1O75925 651 aa5.63□□□□□ -1.51
CUX1-220ENST00000607092 SIX3O95343 332 aaPredicted RBP5.63□□□□□ -1.51
CUX1-220ENST00000607092 IL33O95760 270 aa5.63□□□□□ -1.51
CUX1-220ENST00000607092 PDYNP01213 254 aa5.63□□□□□ -1.51
CUX1-220ENST00000607092 ENO1P06733 434 aaKnown RBP5.63□□□□□ -1.51
CUX1-220ENST00000607092 THBDP07204 575 aa5.63□□□□□ -1.51
CUX1-220ENST00000607092 NGFRP08138 427 aa5.63□□□□□ -1.51
CUX1-220ENST00000607092 IL3P08700 152 aa5.63□□□□□ -1.51
CUX1-220ENST00000607092 RPS17P08708 135 aaKnown RBP5.63□□□□□ -1.51
CUX1-220ENST00000607092 CSF3P09919 207 aa5.63□□□□□ -1.51
CUX1-220ENST00000607092 SLC25A16P16260 332 aa5.63□□□□□ -1.51
CUX1-220ENST00000607092 DDCP20711 480 aa5.63□□□□□ -1.51
CUX1-220ENST00000607092 HNF1AP20823 631 aa5.63□□□□□ -1.51
CUX1-220ENST00000607092 LOXP28300 417 aaPredicted RBP5.63□□□□□ -1.51
CUX1-220ENST00000607092 ELK4P28324 431 aa5.63□□□□□ -1.51
CUX1-220ENST00000607092 ADH6P28332 368 aa5.63□□□□□ -1.51
CUX1-220ENST00000607092 HMOX2P30519 316 aa5.63□□□□□ -1.51
CUX1-220ENST00000607092 PLTPP55058 493 aa5.63□□□□□ -1.51
CUX1-220ENST00000607092 CLDN20P56880 219 aa5.63□□□□□ -1.51
CUX1-220ENST00000607092 CORO7P57737 925 aa5.63□□□□□ -1.51
CUX1-220ENST00000607092 PSMA6P60900 246 aaKnown RBP5.63□□□□□ -1.51
CUX1-220ENST00000607092 GALNT1Q10472 559 aaPredicted RBP5.63□□□□□ -1.51
CUX1-220ENST00000607092 LTB4RQ15722 352 aa5.63□□□□□ -1.51
CUX1-220ENST00000607092 SGO1Q5FBB7 561 aa5.63□□□□□ -1.51
CUX1-220ENST00000607092 TECRLQ5HYJ1 363 aa5.63□□□□□ -1.51
CUX1-220ENST00000607092 CPTPQ5TA50 214 aa5.63□□□□□ -1.51
CUX1-220ENST00000607092 AGAP6Q5VW22 663 aa5.63□□□□□ -1.51
CUX1-220ENST00000607092 ANKRD34AQ69YU3 496 aa5.63□□□□□ -1.51
CUX1-220ENST00000607092 CLEC2AQ6UVW9 174 aa5.63□□□□□ -1.51
CUX1-220ENST00000607092 IKBIPQ70UQ0 350 aa5.63□□□□□ -1.51
CUX1-220ENST00000607092 TDRPQ86YL5 185 aa5.63□□□□□ -1.51
CUX1-220ENST00000607092 MNS1Q8NEH6 495 aa5.63□□□□□ -1.51
CUX1-220ENST00000607092 OR9A2Q8NGT5 310 aa5.63□□□□□ -1.51
CUX1-220ENST00000607092 OR6Y1Q8NGX8 325 aa5.63□□□□□ -1.51
CUX1-220ENST00000607092 OR10D3Q8NH80 312 aa5.63□□□□□ -1.51
CUX1-220ENST00000607092 CEP70Q8NHQ1 597 aa5.63□□□□□ -1.51
CUX1-220ENST00000607092 FAM76AQ8TAV0 307 aa5.63□□□□□ -1.51
CUX1-220ENST00000607092 METTL6Q8TCB7 284 aa5.63□□□□□ -1.51
CUX1-220ENST00000607092 DUSP19Q8WTR2 217 aa5.63□□□□□ -1.51
CUX1-220ENST00000607092 KISS1RQ969F8 398 aaPredicted RBP5.63□□□□□ -1.51
CUX1-220ENST00000607092 CPNE4Q96A23 557 aaPredicted RBP5.63□□□□□ -1.51
CUX1-220ENST00000607092 MUCL1Q96DR8 90 aa5.63□□□□□ -1.51
CUX1-220ENST00000607092 METTL2AQ96IZ6 378 aaKnown RBP5.63□□□□□ -1.51
CUX1-220ENST00000607092 GPR78Q96P69 363 aa5.63□□□□□ -1.51
CUX1-220ENST00000607092 DPH5Q9H2P9 285 aa5.63□□□□□ -1.51
CUX1-220ENST00000607092 SIRT5Q9NXA8 310 aa5.63□□□□□ -1.51
CUX1-220ENST00000607092 TAS2R7Q9NYW3 318 aa5.63□□□□□ -1.51
CUX1-220ENST00000607092 XPR1Q9UBH6 696 aa5.63□□□□□ -1.51
CUX1-220ENST00000607092 C19orf53Q9UNZ5 99 aaPredicted RBP5.63□□□□□ -1.51
CUX1-220ENST00000607092 MGAT4BQ9UQ53 548 aa5.63□□□□□ -1.51
CUX1-220ENST00000607092 MYO1GB0I1T2 1018 aa5.62□□□□□ -1.51
CUX1-220ENST00000607092 ALG1L2C9J202 215 aa5.62□□□□□ -1.51
CUX1-220ENST00000607092 H3BNH8 94 aa5.62□□□□□ -1.51
CUX1-220ENST00000607092 SCDO00767 359 aa5.62□□□□□ -1.51
CUX1-220ENST00000607092 PHF1O43189 567 aaPredicted RBP5.62□□□□□ -1.51
CUX1-220ENST00000607092 PRKD3O94806 890 aa5.62□□□□□ -1.51
CUX1-220ENST00000607092 ANGPTL1O95841 491 aa5.62□□□□□ -1.51
CUX1-220ENST00000607092 ANXA4P09525 319 aaPredicted RBP5.62□□□□□ -1.51
CUX1-220ENST00000607092 DANCRP0C864 163 aa5.62□□□□□ -1.51
CUX1-220ENST00000607092 TCEA1P23193 301 aaKnown RBP5.62□□□□□ -1.51
CUX1-220ENST00000607092 TIA1P31483 386 aaKnown RBP eCLIP5.62□□□□□ -1.512e-6■■□□□ 11.4
CUX1-220ENST00000607092 NCBP2P52298 156 aaKnown RBP eCLIP5.62□□□□□ -1.512e-6■■□□□ 13
CUX1-220ENST00000607092 SUCLG1P53597 346 aaKnown RBP5.62□□□□□ -1.51
CUX1-220ENST00000607092 PKNOX1P55347 436 aa5.62□□□□□ -1.51
CUX1-220ENST00000607092 CARD18P57730 90 aa5.62□□□□□ -1.51
CUX1-220ENST00000607092 PSG6Q00889 435 aa5.62□□□□□ -1.51
CUX1-220ENST00000607092 IRF9Q00978 393 aa5.62□□□□□ -1.51
CUX1-220ENST00000607092 KRTAP1-1Q07627 177 aa5.62□□□□□ -1.51
CUX1-220ENST00000607092 ZNF763Q0D2J5 394 aa5.62□□□□□ -1.51
CUX1-220ENST00000607092 STX5Q13190 355 aa5.62□□□□□ -1.51
CUX1-220ENST00000607092 ITGADQ13349 1161 aa5.62□□□□□ -1.51
CUX1-220ENST00000607092 CAPRIN1Q14444 709 aaKnown RBP5.62□□□□□ -1.51
CUX1-220ENST00000607092 SLC29A2Q14542 456 aa5.62□□□□□ -1.51
CUX1-220ENST00000607092 UAP1Q16222 522 aaPredicted RBP5.62□□□□□ -1.51
CUX1-220ENST00000607092 TMEM44Q2T9K0 475 aa5.62□□□□□ -1.51
CUX1-220ENST00000607092 ZNF672Q499Z4 452 aaPredicted RBP5.62□□□□□ -1.51
CUX1-220ENST00000607092 SH2D4BQ5SQS7 431 aa5.62□□□□□ -1.51
CUX1-220ENST00000607092 NCMAPQ5T1S8 102 aa5.62□□□□□ -1.51
CUX1-220ENST00000607092 SFRP5Q5T4F7 317 aa5.62□□□□□ -1.51
CUX1-220ENST00000607092 HBMQ6B0K9 141 aa5.62□□□□□ -1.51
CUX1-220ENST00000607092 ZCCHC12Q6PEW1 402 aa5.62□□□□□ -1.51
CUX1-220ENST00000607092 NPSR1Q6W5P4 371 aa5.62□□□□□ -1.51
CUX1-220ENST00000607092 GPRIN3Q6ZVF9 776 aa5.62□□□□□ -1.51
CUX1-220ENST00000607092 GGNQ86UU5 652 aa5.62□□□□□ -1.51
CUX1-220ENST00000607092 DTX2Q86UW9 622 aa5.62□□□□□ -1.51
CUX1-220ENST00000607092 TRABD2AQ86V40 505 aa5.62□□□□□ -1.51
CUX1-220ENST00000607092 SLC22A9Q8IVM8 553 aa5.62□□□□□ -1.51
CUX1-220ENST00000607092 PHC2Q8IXK0 858 aa5.62□□□□□ -1.51
CUX1-220ENST00000607092 OR2L13Q8N349 312 aa5.62□□□□□ -1.51
CUX1-220ENST00000607092 CDYL2Q8N8U2 506 aa5.62□□□□□ -1.51
CUX1-220ENST00000607092 CDRT4Q8N9R6 151 aa5.62□□□□□ -1.51
CUX1-220ENST00000607092 ZFP28Q8NHY6 868 aa5.62□□□□□ -1.51
CUX1-220ENST00000607092 ZNF483Q8TF39 744 aaPredicted RBP5.62□□□□□ -1.51
CUX1-220ENST00000607092 KAT2AQ92830 837 aa5.62□□□□□ -1.51
CUX1-220ENST00000607092 EXOSC8Q96B26 276 aaKnown RBP5.62□□□□□ -1.51
CUX1-220ENST00000607092 S100PBPQ96BU1 408 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms