RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 PRRC1Q96M27 445 aa16.59■□□□□ 0.25
VRK3-225ENST00000601912 ADOQ96SZ5 270 aa16.59■□□□□ 0.25
VRK3-225ENST00000601912 OSBPL11Q9BXB4 747 aa16.59■□□□□ 0.25
VRK3-225ENST00000601912 GABARAPL1Q9H0R8 117 aa16.59■□□□□ 0.25
VRK3-225ENST00000601912 NMNAT1Q9HAN9 279 aaPredicted RBP16.59■□□□□ 0.25
VRK3-225ENST00000601912 SMPD3Q9NY59 655 aaPredicted RBP16.59■□□□□ 0.25
VRK3-225ENST00000601912 USE1Q9NZ43 259 aa16.59■□□□□ 0.25
VRK3-225ENST00000601912 RHCGQ9UBD6 479 aa16.59■□□□□ 0.25
VRK3-225ENST00000601912 C7orf72A4D263 438 aa16.59■□□□□ 0.25
VRK3-225ENST00000601912 FFAR1O14842 300 aa16.59■□□□□ 0.25
VRK3-225ENST00000601912 FRS3O43559 492 aa16.59■□□□□ 0.25
VRK3-225ENST00000601912 COX6A1P12074 109 aa16.59■□□□□ 0.25
VRK3-225ENST00000601912 UQCRBP14927 111 aa16.59■□□□□ 0.25
VRK3-225ENST00000601912 PRKACGP22612 351 aa16.59■□□□□ 0.25
VRK3-225ENST00000601912 ABCD3P28288 659 aa16.59■□□□□ 0.25
VRK3-225ENST00000601912 DLSTP36957 453 aa16.59■□□□□ 0.25
VRK3-225ENST00000601912 TAS2R41P59536 307 aa16.59■□□□□ 0.25
VRK3-225ENST00000601912 PIN1Q13526 163 aaPredicted RBP16.59■□□□□ 0.25
VRK3-225ENST00000601912 FGFBP1Q14512 234 aa16.59■□□□□ 0.25
VRK3-225ENST00000601912 KIRREL2Q6UWL6 708 aa16.59■□□□□ 0.25
VRK3-225ENST00000601912 NDUFAF7Q7L592 441 aa16.59■□□□□ 0.25
VRK3-225ENST00000601912 PRR22Q8IZ63 422 aa16.59■□□□□ 0.25
VRK3-225ENST00000601912 PIK3C3Q8NEB9 887 aa16.59■□□□□ 0.25
VRK3-225ENST00000601912 OR4C3Q8NH37 302 aa16.59■□□□□ 0.25
VRK3-225ENST00000601912 GIPC3Q8TF64 312 aa16.59■□□□□ 0.25
VRK3-225ENST00000601912 OMA1Q96E52 524 aa16.59■□□□□ 0.25
VRK3-225ENST00000601912 NAF1Q96HR8 494 aaKnown RBP16.59■□□□□ 0.25
VRK3-225ENST00000601912 CDV3Q9UKY7 258 aaKnown RBP16.59■□□□□ 0.25
VRK3-225ENST00000601912 TMCC3Q9ULS5 477 aa16.59■□□□□ 0.25
VRK3-225ENST00000601912 A4GNTQ9UNA3 340 aa16.59■□□□□ 0.25
VRK3-225ENST00000601912 ORC6Q9Y5N6 252 aa16.59■□□□□ 0.25
VRK3-225ENST00000601912 SDK2Q58EX2 2172 aa16.59■□□□□ 0.25
VRK3-225ENST00000601912 NSG1A0A0A6YYJ2 146 aa16.58■□□□□ 0.24
VRK3-225ENST00000601912 SCDO00767 359 aa16.58■□□□□ 0.24
VRK3-225ENST00000601912 SEMA7AO75326 666 aa16.58■□□□□ 0.24
VRK3-225ENST00000601912 UTS2O95399 124 aa16.58■□□□□ 0.24
VRK3-225ENST00000601912 PNLIPRP2P54317 469 aa16.58■□□□□ 0.24
VRK3-225ENST00000601912 RPS18P62269 152 aaKnown RBP16.58■□□□□ 0.24
VRK3-225ENST00000601912 PPP2R2BQ00005 443 aa16.58■□□□□ 0.24
VRK3-225ENST00000601912 LAPTM4AQ15012 233 aa16.58■□□□□ 0.24
VRK3-225ENST00000601912 NPTX1Q15818 432 aa16.58■□□□□ 0.24
VRK3-225ENST00000601912 MICAQ29983 383 aa16.58■□□□□ 0.24
VRK3-225ENST00000601912 EXOC3L2Q2M3D2 409 aa16.58■□□□□ 0.24
VRK3-225ENST00000601912 CMPK2Q5EBM0 449 aa16.58■□□□□ 0.24
VRK3-225ENST00000601912 PLAG1Q6DJT9 500 aa16.58■□□□□ 0.24
VRK3-225ENST00000601912 GRAMD2AQ8IUY3 354 aa16.58■□□□□ 0.24
VRK3-225ENST00000601912 OR11G2Q8NGC1 345 aa16.58■□□□□ 0.24
VRK3-225ENST00000601912 OR4C15Q8NGM1 316 aa16.58■□□□□ 0.24
VRK3-225ENST00000601912 M1APQ8TC57 530 aa16.58■□□□□ 0.24
VRK3-225ENST00000601912 DHRS1Q96LJ7 313 aa16.58■□□□□ 0.24
VRK3-225ENST00000601912 IMMP1LQ96LU5 166 aa16.58■□□□□ 0.24
VRK3-225ENST00000601912 RDH12Q96NR8 316 aa16.58■□□□□ 0.24
VRK3-225ENST00000601912 ALPK1Q96QP1 1244 aa16.58■□□□□ 0.24
VRK3-225ENST00000601912 MCHR1Q99705 422 aa16.58■□□□□ 0.24
VRK3-225ENST00000601912 DEFB126Q9BYW3 111 aa16.58■□□□□ 0.24
VRK3-225ENST00000601912 LIN28AQ9H9Z2 209 aaKnown RBP16.58■□□□□ 0.24
VRK3-225ENST00000601912 SMURF2Q9HAU4 748 aa16.58■□□□□ 0.24
VRK3-225ENST00000601912 KIF17Q9P2E2 1029 aa16.58■□□□□ 0.24
VRK3-225ENST00000601912 LRCH1Q9Y2L9 728 aa16.58■□□□□ 0.24
VRK3-225ENST00000601912 A0A1W2PQ72 361 aa16.57■□□□□ 0.24
VRK3-225ENST00000601912 SERINC4A6NH21 518 aa16.57■□□□□ 0.24
VRK3-225ENST00000601912 SOCS6O14544 535 aa16.57■□□□□ 0.24
VRK3-225ENST00000601912 TSPAN2O60636 221 aa16.57■□□□□ 0.24
VRK3-225ENST00000601912 ABCB7O75027 752 aa16.57■□□□□ 0.24
VRK3-225ENST00000601912 TBXA2RP21731 343 aa16.57■□□□□ 0.24
VRK3-225ENST00000601912 OTX2P32243 289 aa16.57■□□□□ 0.24
VRK3-225ENST00000601912 KLHL26Q53HC5 615 aa16.57■□□□□ 0.24
VRK3-225ENST00000601912 FGD3Q5JSP0 725 aa16.57■□□□□ 0.24
VRK3-225ENST00000601912 WLSQ5T9L3 541 aa16.57■□□□□ 0.24
VRK3-225ENST00000601912 ATG16L2Q8NAA4 619 aa16.57■□□□□ 0.24
VRK3-225ENST00000601912 ELP5Q8TE02 316 aa16.57■□□□□ 0.24
VRK3-225ENST00000601912 THAP3Q8WTV1 239 aaPredicted RBP16.57■□□□□ 0.24
VRK3-225ENST00000601912 SLC35B4Q969S0 331 aa16.57■□□□□ 0.24
VRK3-225ENST00000601912 POLR2J2Q9GZM3 115 aaKnown RBP16.57■□□□□ 0.24
VRK3-225ENST00000601912 POLR2J3Q9H1A7 115 aaKnown RBP16.57■□□□□ 0.24
VRK3-225ENST00000601912 SLC35A3Q9Y2D2 325 aa16.57■□□□□ 0.24
VRK3-225ENST00000601912 AP4B1Q9Y6B7 739 aa16.57■□□□□ 0.24
VRK3-225ENST00000601912 GVINP1Q7Z2Y8 2422 aa16.57■□□□□ 0.24
VRK3-225ENST00000601912 A0A1W2PRQ8 180 aa16.56■□□□□ 0.24
VRK3-225ENST00000601912 H3BNH8 94 aa16.56■□□□□ 0.24
VRK3-225ENST00000601912 CCNB2O95067 398 aa16.56■□□□□ 0.24
VRK3-225ENST00000601912 THRBP10828 461 aa16.56■□□□□ 0.24
VRK3-225ENST00000601912 LIMS1P48059 325 aa16.56■□□□□ 0.24
VRK3-225ENST00000601912 RNF144AP50876 292 aaPredicted RBP16.56■□□□□ 0.24
VRK3-225ENST00000601912 RAD23AP54725 363 aa16.56■□□□□ 0.24
VRK3-225ENST00000601912 ST3GAL3Q11203 375 aa16.56■□□□□ 0.24
VRK3-225ENST00000601912 EPS8Q12929 822 aa16.56■□□□□ 0.24
VRK3-225ENST00000601912 FOXD4Q12950 439 aaPredicted RBP16.56■□□□□ 0.24
VRK3-225ENST00000601912 DGCR6Q14129 220 aa16.56■□□□□ 0.24
VRK3-225ENST00000601912 RFX4Q33E94 735 aa16.56■□□□□ 0.24
VRK3-225ENST00000601912 ENTPD8Q5MY95 495 aa16.56■□□□□ 0.24
VRK3-225ENST00000601912 DCST1Q5T197 706 aa16.56■□□□□ 0.24
VRK3-225ENST00000601912 PLEKHM3Q6ZWE6 761 aa16.56■□□□□ 0.24
VRK3-225ENST00000601912 TMPRSS7Q7RTY8 843 aa16.56■□□□□ 0.24
VRK3-225ENST00000601912 MARCH9Q86YJ5 346 aa16.56■□□□□ 0.24
VRK3-225ENST00000601912 OFCC1Q8IZS5 231 aa16.56■□□□□ 0.24
VRK3-225ENST00000601912 OR10G2Q8NGC3 310 aa16.56■□□□□ 0.24
VRK3-225ENST00000601912 BARD1Q99728 777 aaKnown RBP16.56■□□□□ 0.24
VRK3-225ENST00000601912 MMP25Q9NPA2 562 aa16.56■□□□□ 0.24
VRK3-225ENST00000601912 MYOTQ9UBF9 498 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms