RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 NUP107P57740 925 aa7.96□□□□□ -1.14
SSBP4-208ENST00000600628 POU6F2P78424 691 aaPredicted RBP7.96□□□□□ -1.14
SSBP4-208ENST00000600628 PLAURQ03405 335 aa7.96□□□□□ -1.14
SSBP4-208ENST00000600628 C17orf67Q0P5P2 114 aa7.96□□□□□ -1.14
SSBP4-208ENST00000600628 LRRC74AQ0VAA2 488 aa7.96□□□□□ -1.14
SSBP4-208ENST00000600628 FUT5Q11128 374 aa7.96□□□□□ -1.14
SSBP4-208ENST00000600628 RCAN2Q14206 197 aa7.96□□□□□ -1.14
SSBP4-208ENST00000600628 MAPK11Q15759 364 aa7.96□□□□□ -1.14
SSBP4-208ENST00000600628 ZNF141Q15928 474 aa7.96□□□□□ -1.14
SSBP4-208ENST00000600628 PGS1Q32NB8 556 aa7.96□□□□□ -1.14
SSBP4-208ENST00000600628 ARHGAP11BQ3KRB8 267 aa7.96□□□□□ -1.14
SSBP4-208ENST00000600628 ACSF3Q4G176 576 aaPredicted RBP7.96□□□□□ -1.14
SSBP4-208ENST00000600628 WLSQ5T9L3 541 aa7.96□□□□□ -1.14
SSBP4-208ENST00000600628 RIPPLY2Q5TAB7 128 aa7.96□□□□□ -1.14
SSBP4-208ENST00000600628 NSUN5P2Q63ZY6 315 aa7.96□□□□□ -1.14
SSBP4-208ENST00000600628 ZNF585AQ6P3V2 769 aa7.96□□□□□ -1.14
SSBP4-208ENST00000600628 B3GNT6Q6ZMB0 384 aa7.96□□□□□ -1.14
SSBP4-208ENST00000600628 ACAD11Q709F0 780 aa7.96□□□□□ -1.14
SSBP4-208ENST00000600628 YRDCQ86U90 279 aaKnown RBP7.96□□□□□ -1.14
SSBP4-208ENST00000600628 MARCH3Q86UD3 253 aa7.96□□□□□ -1.14
SSBP4-208ENST00000600628 FUNDC1Q8IVP5 155 aa7.96□□□□□ -1.14
SSBP4-208ENST00000600628 PM20D2Q8IYS1 436 aa7.96□□□□□ -1.14
SSBP4-208ENST00000600628 FAM71CQ8NEG0 241 aa7.96□□□□□ -1.14
SSBP4-208ENST00000600628 OR5M9Q8NGP3 310 aa7.96□□□□□ -1.14
SSBP4-208ENST00000600628 MBD3L2Q8NHZ7 208 aaPredicted RBP7.96□□□□□ -1.14
SSBP4-208ENST00000600628 DUSP19Q8WTR2 217 aa7.96□□□□□ -1.14
SSBP4-208ENST00000600628 CA5BP1Q8WTZ4 195 aa7.96□□□□□ -1.14
SSBP4-208ENST00000600628 SLC9A6Q92581 669 aa7.96□□□□□ -1.14
SSBP4-208ENST00000600628 RND1Q92730 232 aa7.96□□□□□ -1.14
SSBP4-208ENST00000600628 CDS1Q92903 461 aa7.96□□□□□ -1.14
SSBP4-208ENST00000600628 ABTB1Q969K4 478 aaPredicted RBP7.96□□□□□ -1.14
SSBP4-208ENST00000600628 MARVELD3Q96A59 401 aa7.96□□□□□ -1.14
SSBP4-208ENST00000600628 SDCCAG3Q96C92 435 aa7.96□□□□□ -1.14
SSBP4-208ENST00000600628 C1GALT1C1Q96EU7 318 aa7.96□□□□□ -1.14
SSBP4-208ENST00000600628 OR7D2Q96RA2 312 aa7.96□□□□□ -1.14
SSBP4-208ENST00000600628 EBF4Q9BQW3 602 aa7.96□□□□□ -1.14
SSBP4-208ENST00000600628 YIPF4Q9BSR8 244 aa7.96□□□□□ -1.14
SSBP4-208ENST00000600628 CCDC28BQ9BUN5 200 aa7.96□□□□□ -1.14
SSBP4-208ENST00000600628 ZNF350Q9GZX5 532 aa7.96□□□□□ -1.14
SSBP4-208ENST00000600628 DSN1Q9H410 356 aa7.96□□□□□ -1.14
SSBP4-208ENST00000600628 EXO5Q9H790 373 aa7.96□□□□□ -1.14
SSBP4-208ENST00000600628 CALHM2Q9HA72 323 aa7.96□□□□□ -1.14
SSBP4-208ENST00000600628 HHATLQ9HCP6 504 aa7.96□□□□□ -1.14
SSBP4-208ENST00000600628 SLC6A13Q9NSD5 602 aa7.96□□□□□ -1.14
SSBP4-208ENST00000600628 TAS2R10Q9NYW0 307 aa7.96□□□□□ -1.14
SSBP4-208ENST00000600628 COQ3Q9NZJ6 369 aa7.96□□□□□ -1.14
SSBP4-208ENST00000600628 CLCF1Q9UBD9 225 aa7.96□□□□□ -1.14
SSBP4-208ENST00000600628 ACAD8Q9UKU7 415 aa7.96□□□□□ -1.14
SSBP4-208ENST00000600628 RNF6Q9Y252 685 aa7.96□□□□□ -1.14
SSBP4-208ENST00000600628 SLC6A5Q9Y345 797 aa7.96□□□□□ -1.14
SSBP4-208ENST00000600628 MAP1AP78559 2803 aaPredicted RBP7.96□□□□□ -1.14
SSBP4-208ENST00000600628 MPDZO75970 2070 aa7.95□□□□□ -1.14
SSBP4-208ENST00000600628 A0A0G2JNJ9 132 aa7.95□□□□□ -1.14
SSBP4-208ENST00000600628 DUXAA6NLW8 204 aa7.95□□□□□ -1.14
SSBP4-208ENST00000600628 LINC01387J3KSC0 135 aa7.95□□□□□ -1.14
SSBP4-208ENST00000600628 HMGN4O00479 90 aa7.95□□□□□ -1.14
SSBP4-208ENST00000600628 EDF1O60869 148 aaKnown RBP7.95□□□□□ -1.14
SSBP4-208ENST00000600628 TRAPPC6AO75865 159 aa7.95□□□□□ -1.14
SSBP4-208ENST00000600628 AK1P00568 194 aa7.95□□□□□ -1.14
SSBP4-208ENST00000600628 IL6P05231 212 aa7.95□□□□□ -1.14
SSBP4-208ENST00000600628 LINGO3P0C6S8 592 aa7.95□□□□□ -1.14
SSBP4-208ENST00000600628 KITP10721 976 aa7.95□□□□□ -1.14
SSBP4-208ENST00000600628 DPP4P27487 766 aa7.95□□□□□ -1.14
SSBP4-208ENST00000600628 CHRNB4P30926 498 aa7.95□□□□□ -1.14
SSBP4-208ENST00000600628 S100A3P33764 101 aa7.95□□□□□ -1.14
SSBP4-208ENST00000600628 CDKN2CP42773 168 aa7.95□□□□□ -1.14
SSBP4-208ENST00000600628 DGKQP52824 942 aa7.95□□□□□ -1.14
SSBP4-208ENST00000600628 ATP12AP54707 1039 aa7.95□□□□□ -1.14
SSBP4-208ENST00000600628 IRX1P78414 480 aaPredicted RBP7.95□□□□□ -1.14
SSBP4-208ENST00000600628 TXNL4AP83876 142 aaKnown RBP7.95□□□□□ -1.14
SSBP4-208ENST00000600628 PMPCAQ10713 525 aa7.95□□□□□ -1.14
SSBP4-208ENST00000600628 TP53BP2Q13625 1128 aa7.95□□□□□ -1.14
SSBP4-208ENST00000600628 CD226Q15762 336 aa7.95□□□□□ -1.14
SSBP4-208ENST00000600628 FBXL19-AS1Q494R0 122 aa7.95□□□□□ -1.14
SSBP4-208ENST00000600628 DCST2Q5T1A1 773 aa7.95□□□□□ -1.14
SSBP4-208ENST00000600628 C1orf185Q5T7R7 199 aa7.95□□□□□ -1.14
SSBP4-208ENST00000600628 OR5M10Q6IEU7 315 aa7.95□□□□□ -1.14
SSBP4-208ENST00000600628 BHLHB9Q6PI77 547 aa7.95□□□□□ -1.14
SSBP4-208ENST00000600628 FIGNL1Q6PIW4 674 aa7.95□□□□□ -1.14
SSBP4-208ENST00000600628 MTERF4Q7Z6M4 381 aaKnown RBP7.95□□□□□ -1.14
SSBP4-208ENST00000600628 GALNT10Q86SR1 603 aa7.95□□□□□ -1.14
SSBP4-208ENST00000600628 ANKRD46Q86W74 232 aa7.95□□□□□ -1.14
SSBP4-208ENST00000600628 LACC1Q8IV20 430 aa7.95□□□□□ -1.14
SSBP4-208ENST00000600628 LIX1LQ8IVB5 337 aa7.95□□□□□ -1.14
SSBP4-208ENST00000600628 MISPQ8IVT2 679 aa7.95□□□□□ -1.14
SSBP4-208ENST00000600628 CLEC4FQ8N1N0 589 aa7.95□□□□□ -1.14
SSBP4-208ENST00000600628 GTPBP8Q8N3Z3 284 aaPredicted RBP7.95□□□□□ -1.14
SSBP4-208ENST00000600628 COX18Q8N8Q8 333 aa7.95□□□□□ -1.14
SSBP4-208ENST00000600628 NAXEQ8NCW5 288 aa7.95□□□□□ -1.14
SSBP4-208ENST00000600628 OR5D16Q8NGK9 328 aa7.95□□□□□ -1.14
SSBP4-208ENST00000600628 OR9I1Q8NGQ6 314 aa7.95□□□□□ -1.14
SSBP4-208ENST00000600628 OR5AK3PQ8NH89 298 aa7.95□□□□□ -1.14
SSBP4-208ENST00000600628 FBXO30Q8TB52 745 aa7.95□□□□□ -1.14
SSBP4-208ENST00000600628 LRRC8CQ8TDW0 803 aa7.95□□□□□ -1.14
SSBP4-208ENST00000600628 ASB5Q8WWX0 329 aa7.95□□□□□ -1.14
SSBP4-208ENST00000600628 ZNF524Q96C55 264 aa7.95□□□□□ -1.14
SSBP4-208ENST00000600628 ADGRG7Q96K78 797 aa7.95□□□□□ -1.14
SSBP4-208ENST00000600628 HOXD1Q9GZZ0 328 aa7.95□□□□□ -1.14
SSBP4-208ENST00000600628 RUBCNLQ9H714 662 aa7.95□□□□□ -1.14
SSBP4-208ENST00000600628 TCF7L2Q9NQB0 619 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms