RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, human

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-223	ENST00000599223	DTNBP1	Q96EV8	351 aa		13.18	□□□□□ -0.3
IRF3-223	ENST00000599223	PERP	Q96FX8	193 aa		13.18	□□□□□ -0.3
IRF3-223	ENST00000599223	EGLN2	Q96KS0	407 aa		13.18	□□□□□ -0.3
IRF3-223	ENST00000599223	CCL19	Q99731	98 aa		13.18	□□□□□ -0.3
IRF3-223	ENST00000599223	PIP5K1A	Q99755	562 aa		13.18	□□□□□ -0.3
IRF3-223	ENST00000599223	SHCBP1L	Q9BZQ2	653 aa		13.18	□□□□□ -0.3
IRF3-223	ENST00000599223	EQTN	Q9NQ60	294 aa		13.18	□□□□□ -0.3
IRF3-223	ENST00000599223	ZNF226	Q9NYT6	803 aa		13.18	□□□□□ -0.3
IRF3-223	ENST00000599223	TAS2R7	Q9NYW3	318 aa		13.18	□□□□□ -0.3
IRF3-223	ENST00000599223	STK38L	Q9Y2H1	464 aa		13.18	□□□□□ -0.3
IRF3-223	ENST00000599223	CCL27	Q9Y4X3	112 aa		13.18	□□□□□ -0.3
IRF3-223	ENST00000599223	SLITRK5	O94991	958 aa		13.17	□□□□□ -0.3
IRF3-223	ENST00000599223	CCT5	P48643	541 aa		13.17	□□□□□ -0.3
IRF3-223	ENST00000599223	HSPB3	Q12988	150 aa		13.17	□□□□□ -0.3
IRF3-223	ENST00000599223	ACKR1	Q16570	336 aa		13.17	□□□□□ -0.3
IRF3-223	ENST00000599223	ZNF385B	Q569K4	471 aa		13.17	□□□□□ -0.3
IRF3-223	ENST00000599223	HHAT	Q5VTY9	493 aa		13.17	□□□□□ -0.3
IRF3-223	ENST00000599223	ZYG11A	Q6WRX3	759 aa		13.17	□□□□□ -0.3
IRF3-223	ENST00000599223	FRMD7	Q6ZUT3	714 aa		13.17	□□□□□ -0.3
IRF3-223	ENST00000599223	TRIM46	Q7Z4K8	759 aa		13.17	□□□□□ -0.3
IRF3-223	ENST00000599223	YTHDF3	Q7Z739	585 aa	Known RBP	13.17	□□□□□ -0.3
IRF3-223	ENST00000599223	ZAR1	Q86SH2	424 aa		13.17	□□□□□ -0.3
IRF3-223	ENST00000599223	P3H2	Q8IVL5	708 aa		13.17	□□□□□ -0.3
IRF3-223	ENST00000599223	LRRC75A-AS1	Q8N1F1	130 aa		13.17	□□□□□ -0.3
IRF3-223	ENST00000599223	FBXO30	Q8TB52	745 aa		13.17	□□□□□ -0.3
IRF3-223	ENST00000599223	MGARP	Q8TDB4	240 aa		13.17	□□□□□ -0.3
IRF3-223	ENST00000599223	IGFBPL1	Q8WX77	278 aa		13.17	□□□□□ -0.3
IRF3-223	ENST00000599223	SLC9A6	Q92581	669 aa		13.17	□□□□□ -0.3
IRF3-223	ENST00000599223	HOXB13	Q92826	284 aa	Predicted RBP	13.17	□□□□□ -0.3
IRF3-223	ENST00000599223	CIDEC	Q96AQ7	238 aa	Predicted RBP	13.17	□□□□□ -0.3
IRF3-223	ENST00000599223	APOPT1	Q96IL0	206 aa		13.17	□□□□□ -0.3
IRF3-223	ENST00000599223		Q9N2J8	555 aa		13.17	□□□□□ -0.3
IRF3-223	ENST00000599223	ELOVL5	Q9NYP7	299 aa		13.17	□□□□□ -0.3
IRF3-223	ENST00000599223	GRID1	Q9ULK0	1009 aa		13.17	□□□□□ -0.3
IRF3-223	ENST00000599223	CLEC4A	Q9UMR7	237 aa		13.17	□□□□□ -0.3
IRF3-223	ENST00000599223	VDAC3	Q9Y277	283 aa		13.17	□□□□□ -0.3
IRF3-223	ENST00000599223	FREM1	Q5H8C1	2179 aa		13.17	□□□□□ -0.3
IRF3-223	ENST00000599223	HIVEP2	P31629	2446 aa		13.16	□□□□□ -0.3
IRF3-223	ENST00000599223		A0A1W2PPM1	405 aa		13.16	□□□□□ -0.3
IRF3-223	ENST00000599223	C16orf97	H3BN30	126 aa		13.16	□□□□□ -0.3
IRF3-223	ENST00000599223	SPAG7	O75391	227 aa		13.16	□□□□□ -0.3
IRF3-223	ENST00000599223	RSL1D1	O76021	490 aa	Known RBP	13.16	□□□□□ -0.3
IRF3-223	ENST00000599223	ANGPTL1	O95841	491 aa		13.16	□□□□□ -0.3
IRF3-223	ENST00000599223	PROC	P04070	461 aa		13.16	□□□□□ -0.3
IRF3-223	ENST00000599223	GABRA3	P34903	492 aa		13.16	□□□□□ -0.3
IRF3-223	ENST00000599223	MAP3K8	P41279	467 aa		13.16	□□□□□ -0.3
IRF3-223	ENST00000599223	KCNJ5	P48544	419 aa		13.16	□□□□□ -0.3
IRF3-223	ENST00000599223	PRR5	P85299	388 aa		13.16	□□□□□ -0.3
IRF3-223	ENST00000599223	GUCY1A3	Q02108	690 aa		13.16	□□□□□ -0.3
IRF3-223	ENST00000599223	KIAA0040	Q15053	153 aa		13.16	□□□□□ -0.3
IRF3-223	ENST00000599223	IMPG1	Q17R60	797 aa		13.16	□□□□□ -0.3
IRF3-223	ENST00000599223	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	13.16	□□□□□ -0.3
IRF3-223	ENST00000599223	EXOC3L2	Q2M3D2	409 aa		13.16	□□□□□ -0.3
IRF3-223	ENST00000599223	CTU2	Q2VPK5	515 aa	Known RBP	13.16	□□□□□ -0.3
IRF3-223	ENST00000599223	NOXRED1	Q6NXP6	359 aa		13.16	□□□□□ -0.3
IRF3-223	ENST00000599223	FAM214B	Q7L5A3	538 aa		13.16	□□□□□ -0.3
IRF3-223	ENST00000599223	PRIMA1	Q86XR5	153 aa		13.16	□□□□□ -0.3
IRF3-223	ENST00000599223	GATS	Q8NAP1	163 aa		13.16	□□□□□ -0.3
IRF3-223	ENST00000599223	PIGT	Q969N2	578 aa		13.16	□□□□□ -0.3
IRF3-223	ENST00000599223	GFM2	Q969S9	779 aa	Known RBP	13.16	□□□□□ -0.3
IRF3-223	ENST00000599223	ADGRG7	Q96K78	797 aa		13.16	□□□□□ -0.3
IRF3-223	ENST00000599223	PAIP2	Q9BPZ3	127 aa	Known RBP	13.16	□□□□□ -0.3
IRF3-223	ENST00000599223	TBL1XR1	Q9BZK7	514 aa		13.16	□□□□□ -0.3
IRF3-223	ENST00000599223	C12orf65	Q9H3J6	166 aa	Known RBP	13.16	□□□□□ -0.3
IRF3-223	ENST00000599223	PTGES2	Q9H7Z7	377 aa		13.16	□□□□□ -0.3
IRF3-223	ENST00000599223	PROCR	Q9UNN8	238 aa		13.16	□□□□□ -0.3
IRF3-223	ENST00000599223	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		13.15	□□□□□ -0.3
IRF3-223	ENST00000599223	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	13.15	□□□□□ -0.3
IRF3-223	ENST00000599223	SMAD7	O15105	426 aa	Known RBP	13.15	□□□□□ -0.3
IRF3-223	ENST00000599223	ARHGEF9	O43307	516 aa		13.15	□□□□□ -0.3
IRF3-223	ENST00000599223	SHOX2	O60902	331 aa	Predicted RBP	13.15	□□□□□ -0.3
IRF3-223	ENST00000599223	OPN1LW	P04000	364 aa		13.15	□□□□□ -0.3
IRF3-223	ENST00000599223	GSTA1	P08263	222 aa		13.15	□□□□□ -0.3
IRF3-223	ENST00000599223	ACP2	P11117	423 aa		13.15	□□□□□ -0.3
IRF3-223	ENST00000599223	PSMA4	P25789	261 aa	Known RBP	13.15	□□□□□ -0.3
IRF3-223	ENST00000599223	EIF1AX	P47813	144 aa	Known RBP	13.15	□□□□□ -0.3
IRF3-223	ENST00000599223	EEFSEC	P57772	596 aa	Known RBP	13.15	□□□□□ -0.3
IRF3-223	ENST00000599223	SLC18A2	Q05940	514 aa		13.15	□□□□□ -0.3
IRF3-223	ENST00000599223	CLEC6A	Q6EIG7	209 aa		13.15	□□□□□ -0.3
IRF3-223	ENST00000599223	PPP4R4	Q6NUP7	873 aa		13.15	□□□□□ -0.3
IRF3-223	ENST00000599223	SH2D5	Q6ZV89	423 aa		13.15	□□□□□ -0.3
IRF3-223	ENST00000599223	IKBIP	Q70UQ0	350 aa		13.15	□□□□□ -0.3
IRF3-223	ENST00000599223	OR2T11	Q8NH01	316 aa		13.15	□□□□□ -0.3
IRF3-223	ENST00000599223	GIMAP5	Q96F15	307 aa		13.15	□□□□□ -0.3
IRF3-223	ENST00000599223	OTUB1	Q96FW1	271 aa	Predicted RBP	13.15	□□□□□ -0.3
IRF3-223	ENST00000599223	SLC39A3	Q9BRY0	314 aa		13.15	□□□□□ -0.3
IRF3-223	ENST00000599223	KLHL4	Q9C0H6	718 aa		13.15	□□□□□ -0.3
IRF3-223	ENST00000599223	NSRP1	Q9H0G5	558 aa	Known RBP	13.15	□□□□□ -0.3
IRF3-223	ENST00000599223	TMEM185B	Q9H7F4	350 aa		13.15	□□□□□ -0.3
IRF3-223	ENST00000599223	SDHAF3	Q9NRP4	125 aa		13.15	□□□□□ -0.3
IRF3-223	ENST00000599223	AP4B1	Q9Y6B7	739 aa		13.15	□□□□□ -0.3
IRF3-223	ENST00000599223	SON	P18583	2426 aa	Known RBP	13.15	□□□□□ -0.3
IRF3-223	ENST00000599223	NPIPB8	E9PQR5	432 aa		13.14	□□□□□ -0.31
IRF3-223	ENST00000599223	LINC01387	J3KSC0	135 aa		13.14	□□□□□ -0.31
IRF3-223	ENST00000599223	EIF1AY	O14602	144 aa	Known RBP	13.14	□□□□□ -0.31
IRF3-223	ENST00000599223	PDPK1	O15530	556 aa		13.14	□□□□□ -0.31
IRF3-223	ENST00000599223	GLRA3	O75311	464 aa		13.14	□□□□□ -0.31
IRF3-223	ENST00000599223	OXSR1	O95747	527 aa	Predicted RBP	13.14	□□□□□ -0.31
IRF3-223	ENST00000599223	PLAU	P00749	431 aa		13.14	□□□□□ -0.31
IRF3-223	ENST00000599223	MYL2	P10916	166 aa		13.14	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms