RNA–Protein interactions for RNA: ENST00000594235.1

SIN3B-203, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 1 (best)

Gene SIN3B, Length 923 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-203ENST00000594235 SMPD2O60906 423 aa17.12■□□□□ 0.33
SIN3B-203ENST00000594235 ACP2P11117 423 aa17.12■□□□□ 0.33
SIN3B-203ENST00000594235 EIF1AXP47813 144 aaKnown RBP17.12■□□□□ 0.33
SIN3B-203ENST00000594235 PRKAG1P54619 331 aa17.12■□□□□ 0.33
SIN3B-203ENST00000594235 ACKR1Q16570 336 aa17.12■□□□□ 0.33
SIN3B-203ENST00000594235 SGCBQ16585 318 aa17.12■□□□□ 0.33
SIN3B-203ENST00000594235 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.12■□□□□ 0.33
SIN3B-203ENST00000594235 CTU2Q2VPK5 515 aaKnown RBP17.12■□□□□ 0.33
SIN3B-203ENST00000594235 VPS26BQ4G0F5 336 aa17.12■□□□□ 0.33
SIN3B-203ENST00000594235 RFTN2Q52LD8 501 aaPredicted RBP17.12■□□□□ 0.33
SIN3B-203ENST00000594235 RNF165Q6ZSG1 346 aa17.12■□□□□ 0.33
SIN3B-203ENST00000594235 TDRPQ86YL5 185 aa17.12■□□□□ 0.33
SIN3B-203ENST00000594235 GTPBP8Q8N3Z3 284 aaPredicted RBP17.12■□□□□ 0.33
SIN3B-203ENST00000594235 CCDC63Q8NA47 563 aa17.12■□□□□ 0.33
SIN3B-203ENST00000594235 SLC16A11Q8NCK7 471 aa17.12■□□□□ 0.33
SIN3B-203ENST00000594235 NUP43Q8NFH3 380 aa17.12■□□□□ 0.33
SIN3B-203ENST00000594235 CEP70Q8NHQ1 597 aa17.12■□□□□ 0.33
SIN3B-203ENST00000594235 CLHC1Q8NHS4 586 aa17.12■□□□□ 0.33
SIN3B-203ENST00000594235 ZFP28Q8NHY6 868 aa17.12■□□□□ 0.33
SIN3B-203ENST00000594235 FBXO30Q8TB52 745 aa17.12■□□□□ 0.33
SIN3B-203ENST00000594235 FAM110BQ8TC76 370 aa17.12■□□□□ 0.33
SIN3B-203ENST00000594235 CAVIN3Q969G5 261 aa17.12■□□□□ 0.33
SIN3B-203ENST00000594235 PIGTQ969N2 578 aa17.12■□□□□ 0.33
SIN3B-203ENST00000594235 PPCDCQ96CD2 204 aa17.12■□□□□ 0.33
SIN3B-203ENST00000594235 ZBED6CLQ96FA7 236 aaPredicted RBP17.12■□□□□ 0.33
SIN3B-203ENST00000594235 ZC3HAV1LQ96H79 300 aaKnown RBP17.12■□□□□ 0.33
SIN3B-203ENST00000594235 MS4A4EQ96PG1 132 aa17.12■□□□□ 0.33
SIN3B-203ENST00000594235 UBTD1Q9HAC8 227 aa17.12■□□□□ 0.33
SIN3B-203ENST00000594235 BAIAP2L1Q9UHR4 511 aa17.12■□□□□ 0.33
SIN3B-203ENST00000594235 JMJD1CQ15652 2540 aa17.12■□□□□ 0.33
SIN3B-203ENST00000594235 A0A087WZY1 265 aa17.11■□□□□ 0.33
SIN3B-203ENST00000594235 COPEO14579 308 aa17.11■□□□□ 0.33
SIN3B-203ENST00000594235 AZIN1O14977 448 aa17.11■□□□□ 0.33
SIN3B-203ENST00000594235 NDUFB5O43674 189 aa17.11■□□□□ 0.33
SIN3B-203ENST00000594235 KCNK2O95069 426 aa17.11■□□□□ 0.33
SIN3B-203ENST00000594235 NEFHP12036 1026 aa17.11■□□□□ 0.33
SIN3B-203ENST00000594235 KRT4P19013 534 aa17.11■□□□□ 0.33
SIN3B-203ENST00000594235 TBXA2RP21731 343 aa17.11■□□□□ 0.33
SIN3B-203ENST00000594235 PSMA4P25789 261 aaKnown RBP17.11■□□□□ 0.33
SIN3B-203ENST00000594235 MANFP55145 182 aaKnown RBP17.11■□□□□ 0.33
SIN3B-203ENST00000594235 DUSP5Q16690 384 aa17.11■□□□□ 0.33
SIN3B-203ENST00000594235 PLPPR5Q32ZL2 321 aa17.11■□□□□ 0.33
SIN3B-203ENST00000594235 EXOSC6Q5RKV6 272 aaKnown RBP17.11■□□□□ 0.33
SIN3B-203ENST00000594235 ANKRD34AQ69YU3 496 aa17.11■□□□□ 0.33
SIN3B-203ENST00000594235 MFSD12Q6NUT3 480 aa17.11■□□□□ 0.33
SIN3B-203ENST00000594235 P3H2Q8IVL5 708 aa17.11■□□□□ 0.33
SIN3B-203ENST00000594235 C10orf107Q8IVU9 208 aa17.11■□□□□ 0.33
SIN3B-203ENST00000594235 GATSQ8NAP1 163 aa17.11■□□□□ 0.33
SIN3B-203ENST00000594235 LRRN4CLQ8ND94 238 aa17.11■□□□□ 0.33
SIN3B-203ENST00000594235 OR10D3Q8NH80 312 aa17.11■□□□□ 0.33
SIN3B-203ENST00000594235 CCL19Q99731 98 aa17.11■□□□□ 0.33
SIN3B-203ENST00000594235 KLHDC3Q9BQ90 382 aa17.11■□□□□ 0.33
SIN3B-203ENST00000594235 GATA5Q9BWX5 397 aaPredicted RBP17.11■□□□□ 0.33
SIN3B-203ENST00000594235 ACSS1Q9NUB1 689 aaPredicted RBP17.11■□□□□ 0.33
SIN3B-203ENST00000594235 SH3BP4Q9P0V3 963 aa17.11■□□□□ 0.33
SIN3B-203ENST00000594235 STOML1Q9UBI4 398 aa17.11■□□□□ 0.33
SIN3B-203ENST00000594235 CLEC4AQ9UMR7 237 aa17.11■□□□□ 0.33
SIN3B-203ENST00000594235 FIS1Q9Y3D6 152 aa17.11■□□□□ 0.33
SIN3B-203ENST00000594235 A0A1W2PRB8 838 aa17.1■□□□□ 0.33
SIN3B-203ENST00000594235 C7orf72A4D263 438 aa17.1■□□□□ 0.33
SIN3B-203ENST00000594235 SMIM23A6NLE4 172 aa17.1■□□□□ 0.33
SIN3B-203ENST00000594235 LSM1O15116 133 aaKnown RBP17.1■□□□□ 0.33
SIN3B-203ENST00000594235 ADAMDEC1O15204 470 aa17.1■□□□□ 0.33
SIN3B-203ENST00000594235 SS18L1O75177 396 aaPredicted RBP17.1■□□□□ 0.33
SIN3B-203ENST00000594235 THBDP07204 575 aa17.1■□□□□ 0.33
SIN3B-203ENST00000594235 FPR1P21462 350 aa17.1■□□□□ 0.33
SIN3B-203ENST00000594235 RPL38P63173 70 aaKnown RBP17.1■□□□□ 0.33
SIN3B-203ENST00000594235 SLC18A2Q05940 514 aa17.1■□□□□ 0.33
SIN3B-203ENST00000594235 PCLAFQ15004 111 aa17.1■□□□□ 0.33
SIN3B-203ENST00000594235 EXOC3L2Q2M3D2 409 aa17.1■□□□□ 0.33
SIN3B-203ENST00000594235 KANK2Q63ZY3 851 aa17.1■□□□□ 0.33
SIN3B-203ENST00000594235 PPP4R4Q6NUP7 873 aa17.1■□□□□ 0.33
SIN3B-203ENST00000594235 FIGNL1Q6PIW4 674 aa17.1■□□□□ 0.33
SIN3B-203ENST00000594235 CLEC9AQ6UXN8 241 aa17.1■□□□□ 0.33
SIN3B-203ENST00000594235 SZRD1Q7Z422 152 aa17.1■□□□□ 0.33
SIN3B-203ENST00000594235 WDR75Q8IWA0 830 aaKnown RBP17.1■□□□□ 0.33
SIN3B-203ENST00000594235 OR6K3Q8NGY3 331 aa17.1■□□□□ 0.33
SIN3B-203ENST00000594235 ACTRT2Q8TDY3 377 aa17.1■□□□□ 0.33
SIN3B-203ENST00000594235 EPS8L3Q8TE67 593 aaKnown RBP17.1■□□□□ 0.33
SIN3B-203ENST00000594235 ZBTB8AQ96BR9 441 aa17.1■□□□□ 0.33
SIN3B-203ENST00000594235 C16orf58Q96GQ5 468 aa17.1■□□□□ 0.33
SIN3B-203ENST00000594235 GMPPAQ96IJ6 420 aaPredicted RBP17.1■□□□□ 0.33
SIN3B-203ENST00000594235 COX4I2Q96KJ9 171 aa17.1■□□□□ 0.33
SIN3B-203ENST00000594235 PRRG4Q9BZD6 226 aa17.1■□□□□ 0.33
SIN3B-203ENST00000594235 KLHL4Q9C0H6 718 aa17.1■□□□□ 0.33
SIN3B-203ENST00000594235 IQCGQ9H095 443 aaKnown RBP17.1■□□□□ 0.33
SIN3B-203ENST00000594235 ZNF395Q9H8N7 513 aaPredicted RBP17.1■□□□□ 0.33
SIN3B-203ENST00000594235 PPCSQ9HAB8 311 aa17.1■□□□□ 0.33
SIN3B-203ENST00000594235 HHATLQ9HCP6 504 aa17.1■□□□□ 0.33
SIN3B-203ENST00000594235 PLSCR4Q9NRQ2 329 aa17.1■□□□□ 0.33
SIN3B-203ENST00000594235 MED17Q9NVC6 651 aa17.1■□□□□ 0.33
SIN3B-203ENST00000594235 FBXO34Q9NWN3 711 aa17.1■□□□□ 0.33
SIN3B-203ENST00000594235 EMC9Q9Y3B6 208 aa17.1■□□□□ 0.33
SIN3B-203ENST00000594235 DNAJC15Q9Y5T4 150 aa17.1■□□□□ 0.33
SIN3B-203ENST00000594235 CSPG4Q6UVK1 2322 aa17.1■□□□□ 0.33
SIN3B-203ENST00000594235 OPN1LWP04000 364 aa17.09■□□□□ 0.33
SIN3B-203ENST00000594235 LINC00032P0C843 101 aa17.09■□□□□ 0.33
SIN3B-203ENST00000594235 IL11P20809 199 aa17.09■□□□□ 0.33
SIN3B-203ENST00000594235 EFNA1P20827 205 aaPredicted RBP17.09■□□□□ 0.33
SIN3B-203ENST00000594235 RAC1P63000 192 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms