RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 SH2D2AQ9NP31 389 aa8.83□□□□□ -1
DDX39A-220ENST00000593008 AGPAT4Q9NRZ5 378 aa8.83□□□□□ -1
DDX39A-220ENST00000593008 ABI3Q9P2A4 366 aa8.83□□□□□ -1
DDX39A-220ENST00000593008 P2RX2Q9UBL9 471 aa8.83□□□□□ -1
DDX39A-220ENST00000593008 CNOT11Q9UKZ1 510 aaKnown RBP8.83□□□□□ -1
DDX39A-220ENST00000593008 YARS2Q9Y2Z4 477 aaKnown RBP8.83□□□□□ -1
DDX39A-220ENST00000593008 CHCHD2Q9Y6H1 151 aaPredicted RBP8.83□□□□□ -1
DDX39A-220ENST00000593008 C15orf38-AP3S2A0A0A6YYH1 394 aa8.82□□□□□ -1
DDX39A-220ENST00000593008 ANKUB1A6NFN9 424 aa8.82□□□□□ -1
DDX39A-220ENST00000593008 ARPC2O15144 300 aa8.82□□□□□ -1
DDX39A-220ENST00000593008 TPST1O60507 370 aa8.82□□□□□ -1
DDX39A-220ENST00000593008 ADAM11O75078 769 aa8.82□□□□□ -1
DDX39A-220ENST00000593008 SEMA7AO75326 666 aa8.82□□□□□ -1
DDX39A-220ENST00000593008 RASAL1O95294 804 aa8.82□□□□□ -1
DDX39A-220ENST00000593008 PGM3O95394 542 aa8.82□□□□□ -1
DDX39A-220ENST00000593008 OXSR1O95747 527 aaPredicted RBP8.82□□□□□ -1
DDX39A-220ENST00000593008 NPPAP01160 153 aa8.82□□□□□ -1
DDX39A-220ENST00000593008 TCEA1P23193 301 aaKnown RBP8.82□□□□□ -1
DDX39A-220ENST00000593008 PPIBP23284 216 aaKnown RBP8.82□□□□□ -1
DDX39A-220ENST00000593008 PGM1P36871 562 aa8.82□□□□□ -1
DDX39A-220ENST00000593008 DNASE1L1P49184 302 aa8.82□□□□□ -1
DDX39A-220ENST00000593008 HLCSP50747 726 aa8.82□□□□□ -1
DDX39A-220ENST00000593008 NRG3P56975 720 aa8.82□□□□□ -1
DDX39A-220ENST00000593008 PCBP3P57721 371 aaKnown RBP8.82□□□□□ -1
DDX39A-220ENST00000593008 DCAF7P61962 342 aa8.82□□□□□ -1
DDX39A-220ENST00000593008 DMTNQ08495 405 aa8.82□□□□□ -1
DDX39A-220ENST00000593008 NTRK2Q16620 822 aa8.82□□□□□ -1
DDX39A-220ENST00000593008 DECR1Q16698 335 aa8.82□□□□□ -1
DDX39A-220ENST00000593008 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.82□□□□□ -1
DDX39A-220ENST00000593008 FLYWCH1Q4VC44 716 aa8.82□□□□□ -1
DDX39A-220ENST00000593008 LRRC23Q53EV4 343 aaPredicted RBP8.82□□□□□ -1
DDX39A-220ENST00000593008 ZNF766Q5HY98 468 aa8.82□□□□□ -1
DDX39A-220ENST00000593008 ATAD3BQ5T9A4 648 aa8.82□□□□□ -1
DDX39A-220ENST00000593008 OR5M10Q6IEU7 315 aa8.82□□□□□ -1
DDX39A-220ENST00000593008 PGM2L1Q6PCE3 622 aa8.82□□□□□ -1
DDX39A-220ENST00000593008 CYP2R1Q6VVX0 501 aa8.82□□□□□ -1
DDX39A-220ENST00000593008 ZNF836Q6ZNA1 936 aa8.82□□□□□ -1
DDX39A-220ENST00000593008 ARPINQ7Z6K5 226 aa8.82□□□□□ -1
DDX39A-220ENST00000593008 ZNF619Q8N2I2 560 aa8.82□□□□□ -1
DDX39A-220ENST00000593008 FAM26EQ8N5C1 309 aa8.82□□□□□ -1
DDX39A-220ENST00000593008 POGLUT1Q8NBL1 392 aa8.82□□□□□ -1
DDX39A-220ENST00000593008 C11orf65Q8NCR3 313 aa8.82□□□□□ -1
DDX39A-220ENST00000593008 GPR32P1Q8NGA4 272 aa8.82□□□□□ -1
DDX39A-220ENST00000593008 SPPL2AQ8TCT8 520 aa8.82□□□□□ -1
DDX39A-220ENST00000593008 FAR1Q8WVX9 515 aa8.82□□□□□ -1
DDX39A-220ENST00000593008 BARD1Q99728 777 aaKnown RBP8.82□□□□□ -1
DDX39A-220ENST00000593008 RAD21L1Q9H4I0 556 aa8.82□□□□□ -1
DDX39A-220ENST00000593008 TMEM38AQ9H6F2 299 aa8.82□□□□□ -1
DDX39A-220ENST00000593008 OLAHQ9NV23 265 aa8.82□□□□□ -1
DDX39A-220ENST00000593008 EXD2Q9NVH0 621 aa8.82□□□□□ -1
DDX39A-220ENST00000593008 HPF1Q9NWY4 346 aa8.82□□□□□ -1
DDX39A-220ENST00000593008 LRFN1Q9P244 771 aa8.82□□□□□ -1
DDX39A-220ENST00000593008 SLC7A8Q9UHI5 535 aa8.82□□□□□ -1
DDX39A-220ENST00000593008 CORO2BQ9UQ03 480 aa8.82□□□□□ -1
DDX39A-220ENST00000593008 WDR45Q9Y484 360 aa8.82□□□□□ -1
DDX39A-220ENST00000593008 SHANK1Q9Y566 2161 aa8.82□□□□□ -1
DDX39A-220ENST00000593008 USP9XQ93008 2570 aaPredicted RBP8.81□□□□□ -1
DDX39A-220ENST00000593008 ELOVL7A1L3X0 281 aa8.81□□□□□ -1
DDX39A-220ENST00000593008 PRAMEF25A6NGN4 478 aa8.81□□□□□ -1
DDX39A-220ENST00000593008 OR6C70A6NIJ9 312 aa8.81□□□□□ -1
DDX39A-220ENST00000593008 LRRC3CA6NJW4 275 aa8.81□□□□□ -1
DDX39A-220ENST00000593008 C5orf58C9J3I9 102 aa8.81□□□□□ -1
DDX39A-220ENST00000593008 CXCR6O00574 342 aa8.81□□□□□ -1
DDX39A-220ENST00000593008 FADS1O60427 444 aa8.81□□□□□ -1
DDX39A-220ENST00000593008 STX11O75558 287 aa8.81□□□□□ -1
DDX39A-220ENST00000593008 SLC25A12O75746 678 aa8.81□□□□□ -1
DDX39A-220ENST00000593008 DNAJC8O75937 253 aaPredicted RBP8.81□□□□□ -1
DDX39A-220ENST00000593008 WISP2O76076 250 aa8.81□□□□□ -1
DDX39A-220ENST00000593008 AGFG2O95081 481 aa8.81□□□□□ -1
DDX39A-220ENST00000593008 GGT1P19440 569 aa8.81□□□□□ -1
DDX39A-220ENST00000593008 CD247P20963 164 aa8.81□□□□□ -1
DDX39A-220ENST00000593008 ATP6V1C1P21283 382 aa8.81□□□□□ -1
DDX39A-220ENST00000593008 FUT4P22083 530 aa8.81□□□□□ -1
DDX39A-220ENST00000593008 RPS4Y1P22090 263 aaKnown RBP8.81□□□□□ -1
DDX39A-220ENST00000593008 EVI2BP34910 448 aa8.81□□□□□ -1
DDX39A-220ENST00000593008 MNAT1P51948 309 aa8.81□□□□□ -1
DDX39A-220ENST00000593008 GAS1P54826 345 aa8.81□□□□□ -1
DDX39A-220ENST00000593008 PSPHP78330 225 aa8.81□□□□□ -1
DDX39A-220ENST00000593008 HPCAP84074 193 aa8.81□□□□□ -1
DDX39A-220ENST00000593008 HOXC5Q00444 222 aa8.81□□□□□ -1
DDX39A-220ENST00000593008 ELOAQ14241 798 aaKnown RBP8.81□□□□□ -1
DDX39A-220ENST00000593008 ZNF630Q2M218 657 aaPredicted RBP8.81□□□□□ -1
DDX39A-220ENST00000593008 DNAL1Q4LDG9 190 aa8.81□□□□□ -1
DDX39A-220ENST00000593008 SAMD4BQ5PRF9 694 aaKnown RBP8.81□□□□□ -1
DDX39A-220ENST00000593008 FNDC7Q5VTL7 733 aa8.81□□□□□ -1
DDX39A-220ENST00000593008 RPUSD3Q6P087 351 aaKnown RBP8.81□□□□□ -1
DDX39A-220ENST00000593008 OPN5Q6U736 354 aa8.81□□□□□ -1
DDX39A-220ENST00000593008 ENPP6Q6UWR7 440 aa8.81□□□□□ -1
DDX39A-220ENST00000593008 LRRC74BQ6ZQY2 392 aa8.81□□□□□ -1
DDX39A-220ENST00000593008 VTCN1Q7Z7D3 282 aa8.81□□□□□ -1
DDX39A-220ENST00000593008 RBM45Q8IUH3 476 aaKnown RBP8.81□□□□□ -1
DDX39A-220ENST00000593008 LACC1Q8IV20 430 aa8.81□□□□□ -1
DDX39A-220ENST00000593008 CLIP4Q8N3C7 705 aa8.81□□□□□ -1
DDX39A-220ENST00000593008 HIPK4Q8NE63 616 aa8.81□□□□□ -1
DDX39A-220ENST00000593008 OR4D11Q8NGI4 311 aa8.81□□□□□ -1
DDX39A-220ENST00000593008 RELTQ969Z4 430 aa8.81□□□□□ -1
DDX39A-220ENST00000593008 SH3YL1Q96HL8 342 aaPredicted RBP8.81□□□□□ -1
DDX39A-220ENST00000593008 C5orf34Q96MH7 638 aa8.81□□□□□ -1
DDX39A-220ENST00000593008 TRNT1Q96Q11 434 aaKnown RBP8.81□□□□□ -1
DDX39A-220ENST00000593008 SH3GL1Q99961 368 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms