RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 TRIB1Q96RU8 372 aa9.16□□□□□ -0.94
BRCA1-227ENST00000591849 CCDC28BQ9BUN5 200 aa9.16□□□□□ -0.94
BRCA1-227ENST00000591849 UGT2B28Q9BY64 529 aa9.16□□□□□ -0.94
BRCA1-227ENST00000591849 OR2B2Q9GZK3 357 aa9.16□□□□□ -0.94
BRCA1-227ENST00000591849 OR51I1Q9H343 314 aa9.16□□□□□ -0.94
BRCA1-227ENST00000591849 RUBCNLQ9H714 662 aa9.16□□□□□ -0.94
BRCA1-227ENST00000591849 CHST11Q9NPF2 352 aa9.16□□□□□ -0.94
BRCA1-227ENST00000591849 GPATCH2Q9NW75 528 aa9.16□□□□□ -0.94
BRCA1-227ENST00000591849 STOML1Q9UBI4 398 aa9.16□□□□□ -0.94
BRCA1-227ENST00000591849 MRPS18CQ9Y3D5 142 aaKnown RBP9.16□□□□□ -0.94
BRCA1-227ENST00000591849 HRH3Q9Y5N1 445 aa9.16□□□□□ -0.94
BRCA1-227ENST00000591849 ABCA12Q86UK0 2595 aa9.15□□□□□ -0.94
BRCA1-227ENST00000591849 FAM90A27PA6NNH2 459 aa9.15□□□□□ -0.94
BRCA1-227ENST00000591849 ENO4A6NNW6 628 aa9.15□□□□□ -0.94
BRCA1-227ENST00000591849 ALG1L2C9J202 215 aa9.15□□□□□ -0.94
BRCA1-227ENST00000591849 RFXANKO14593 260 aa9.15□□□□□ -0.94
BRCA1-227ENST00000591849 ZNF195O14628 629 aa9.15□□□□□ -0.94
BRCA1-227ENST00000591849 HCRTR2O43614 444 aa9.15□□□□□ -0.94
BRCA1-227ENST00000591849 SCN2BO60939 215 aa9.15□□□□□ -0.94
BRCA1-227ENST00000591849 NUDT14O95848 222 aa9.15□□□□□ -0.94
BRCA1-227ENST00000591849 GSNP06396 782 aa9.15□□□□□ -0.94
BRCA1-227ENST00000591849 NGFRP08138 427 aa9.15□□□□□ -0.94
BRCA1-227ENST00000591849 OR12D1P0DN82 309 aa9.15□□□□□ -0.94
BRCA1-227ENST00000591849 GLI4P10075 376 aa9.15□□□□□ -0.94
BRCA1-227ENST00000591849 NCF2P19878 526 aaPredicted RBP9.15□□□□□ -0.94
BRCA1-227ENST00000591849 ENDOUP21128 410 aaKnown RBP9.15□□□□□ -0.94
BRCA1-227ENST00000591849 CHRNB4P30926 498 aa9.15□□□□□ -0.94
BRCA1-227ENST00000591849 STARP49675 285 aa9.15□□□□□ -0.94
BRCA1-227ENST00000591849 KHKP50053 298 aa9.15□□□□□ -0.94
BRCA1-227ENST00000591849 ZNF41P51814 821 aaPredicted RBP9.15□□□□□ -0.94
BRCA1-227ENST00000591849 POLR2JP52435 117 aaKnown RBP9.15□□□□□ -0.94
BRCA1-227ENST00000591849 ATP12AP54707 1039 aa9.15□□□□□ -0.94
BRCA1-227ENST00000591849 GAS1P54826 345 aa9.15□□□□□ -0.94
BRCA1-227ENST00000591849 CRYZQ08257 329 aaKnown RBP9.15□□□□□ -0.94
BRCA1-227ENST00000591849 GANABQ14697 944 aaKnown RBP9.15□□□□□ -0.94
BRCA1-227ENST00000591849 GPR68Q15743 365 aa9.15□□□□□ -0.94
BRCA1-227ENST00000591849 ZNF630Q2M218 657 aaPredicted RBP9.15□□□□□ -0.94
BRCA1-227ENST00000591849 GPAT3Q53EU6 434 aa9.15□□□□□ -0.94
BRCA1-227ENST00000591849 C6orf10Q5SRN2 563 aa9.15□□□□□ -0.94
BRCA1-227ENST00000591849 CCDC71Q8IV32 467 aaPredicted RBP9.15□□□□□ -0.94
BRCA1-227ENST00000591849 MEIOBQ8N635 442 aa9.15□□□□□ -0.94
BRCA1-227ENST00000591849 B4GALNT2Q8NHY0 566 aa9.15□□□□□ -0.94
BRCA1-227ENST00000591849 RNF138Q8WVD3 245 aa9.15□□□□□ -0.94
BRCA1-227ENST00000591849 NTNG2Q96CW9 530 aa9.15□□□□□ -0.94
BRCA1-227ENST00000591849 SH3YL1Q96HL8 342 aaPredicted RBP9.15□□□□□ -0.94
BRCA1-227ENST00000591849 CCDC115Q96NT0 180 aa9.15□□□□□ -0.94
BRCA1-227ENST00000591849 PIGQQ9BRB3 760 aa9.15□□□□□ -0.94
BRCA1-227ENST00000591849 TTYH2Q9BSA4 534 aa9.15□□□□□ -0.94
BRCA1-227ENST00000591849 INPP5KQ9BT40 448 aa9.15□□□□□ -0.94
BRCA1-227ENST00000591849 KCNJ16Q9NPI9 418 aa9.15□□□□□ -0.94
BRCA1-227ENST00000591849 SDR39U1Q9NRG7 319 aaPredicted RBP9.15□□□□□ -0.94
BRCA1-227ENST00000591849 FBXO34Q9NWN3 711 aa9.15□□□□□ -0.94
BRCA1-227ENST00000591849 KLF2Q9Y5W3 355 aaPredicted RBP9.15□□□□□ -0.94
BRCA1-227ENST00000591849 KCNE3Q9Y6H6 103 aa9.15□□□□□ -0.94
BRCA1-227ENST00000591849 NINQ8N4C6 2090 aa9.15□□□□□ -0.94
BRCA1-227ENST00000591849 CELSR2Q9HCU4 2923 aa9.14□□□□□ -0.95
BRCA1-227ENST00000591849 NPIPA5A0A0B4J1W7 369 aa9.14□□□□□ -0.95
BRCA1-227ENST00000591849 FAM234BA2RU67 622 aa9.14□□□□□ -0.95
BRCA1-227ENST00000591849 TMEM247A6NEH6 219 aa9.14□□□□□ -0.95
BRCA1-227ENST00000591849 HSPB2A8KAH6 182 aa9.14□□□□□ -0.95
BRCA1-227ENST00000591849 NPIPA7E9PJI5 369 aa9.14□□□□□ -0.95
BRCA1-227ENST00000591849 LINC01387J3KSC0 135 aa9.14□□□□□ -0.95
BRCA1-227ENST00000591849 ZIC3O60481 467 aa9.14□□□□□ -0.95
BRCA1-227ENST00000591849 STX11O75558 287 aa9.14□□□□□ -0.95
BRCA1-227ENST00000591849 CYP7B1O75881 506 aa9.14□□□□□ -0.95
BRCA1-227ENST00000591849 EPPINO95925 133 aa9.14□□□□□ -0.95
BRCA1-227ENST00000591849 IL2RAP01589 272 aa9.14□□□□□ -0.95
BRCA1-227ENST00000591849 VIMP08670 466 aaKnown RBP9.14□□□□□ -0.95
BRCA1-227ENST00000591849 NPIPA8P0DM63 369 aa9.14□□□□□ -0.95
BRCA1-227ENST00000591849 TROVE2P10155 538 aaKnown RBP eCLIP9.14□□□□□ -0.95
BRCA1-227ENST00000591849 PEPDP12955 493 aa9.14□□□□□ -0.95
BRCA1-227ENST00000591849 COX6B1P14854 86 aa9.14□□□□□ -0.95
BRCA1-227ENST00000591849 POU3F2P20265 443 aaPredicted RBP9.14□□□□□ -0.95
BRCA1-227ENST00000591849 CHMP24386 653 aa9.14□□□□□ -0.95
BRCA1-227ENST00000591849 DCTP40126 519 aa9.14□□□□□ -0.95
BRCA1-227ENST00000591849 ZFP36L2P47974 494 aaKnown RBP9.14□□□□□ -0.95
BRCA1-227ENST00000591849 RNF144AP50876 292 aaPredicted RBP9.14□□□□□ -0.95
BRCA1-227ENST00000591849 EEFSECP57772 596 aaKnown RBP9.14□□□□□ -0.95
BRCA1-227ENST00000591849 HSPB2Q16082 182 aa9.14□□□□□ -0.95
BRCA1-227ENST00000591849 TIGD2Q4W5G0 525 aa9.14□□□□□ -0.95
BRCA1-227ENST00000591849 NHSL2Q5HYW2 709 aa9.14□□□□□ -0.95
BRCA1-227ENST00000591849 SAXO2Q658L1 398 aa9.14□□□□□ -0.95
BRCA1-227ENST00000591849 APOOLQ6UXV4 268 aa9.14□□□□□ -0.95
BRCA1-227ENST00000591849 MSANTD1Q6ZTZ1 278 aa9.14□□□□□ -0.95
BRCA1-227ENST00000591849 P4HA3Q7Z4N8 544 aa9.14□□□□□ -0.95
BRCA1-227ENST00000591849 MTERF4Q7Z6M4 381 aaKnown RBP9.14□□□□□ -0.95
BRCA1-227ENST00000591849 ZAR1Q86SH2 424 aa9.14□□□□□ -0.95
BRCA1-227ENST00000591849 RNF130Q86XS8 419 aa9.14□□□□□ -0.95
BRCA1-227ENST00000591849 LACC1Q8IV20 430 aa9.14□□□□□ -0.95
BRCA1-227ENST00000591849 UBQLNLQ8IYU4 475 aa9.14□□□□□ -0.95
BRCA1-227ENST00000591849 RPRMLQ8N4K4 120 aa9.14□□□□□ -0.95
BRCA1-227ENST00000591849 TMCO5AQ8N6Q1 288 aa9.14□□□□□ -0.95
BRCA1-227ENST00000591849 FADS6Q8N9I5 356 aa9.14□□□□□ -0.95
BRCA1-227ENST00000591849 OR5M1Q8NGP8 315 aa9.14□□□□□ -0.95
BRCA1-227ENST00000591849 GOT1L1Q8NHS2 421 aaPredicted RBP9.14□□□□□ -0.95
BRCA1-227ENST00000591849 RFWD2Q8NHY2 731 aa9.14□□□□□ -0.95
BRCA1-227ENST00000591849 SMPDL3BQ92485 455 aa9.14□□□□□ -0.95
BRCA1-227ENST00000591849 RAB8BQ92930 207 aa9.14□□□□□ -0.95
BRCA1-227ENST00000591849 NEURL3Q96EH8 262 aa9.14□□□□□ -0.95
BRCA1-227ENST00000591849 C1GALT1C1Q96EU7 318 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms