RNA–Protein interactions for RNA: ENST00000590049.5

CAPNS1-209, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5

Gene CAPNS1, Length 592 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-209ENST00000590049 SAMD4BQ5PRF9 694 aaKnown RBP10.58□□□□□ -0.72
CAPNS1-209ENST00000590049 NANOGP8Q6NSW7 305 aa10.58□□□□□ -0.72
CAPNS1-209ENST00000590049 LAPTM4BQ86VI4 370 aa10.58□□□□□ -0.72
CAPNS1-209ENST00000590049 LIX1LQ8IVB5 337 aa10.58□□□□□ -0.72
CAPNS1-209ENST00000590049 SHISA5Q8N114 240 aa10.58□□□□□ -0.72
CAPNS1-209ENST00000590049 LGI4Q8N135 537 aa10.58□□□□□ -0.72
CAPNS1-209ENST00000590049 FAM98AQ8NCA5 519 aaKnown RBP10.58□□□□□ -0.72
CAPNS1-209ENST00000590049 NUP43Q8NFH3 380 aa10.58□□□□□ -0.72
CAPNS1-209ENST00000590049 TNIP2Q8NFZ5 429 aa10.58□□□□□ -0.72
CAPNS1-209ENST00000590049 PSMA8Q8TAA3 256 aa10.58□□□□□ -0.72
CAPNS1-209ENST00000590049 ZFP90Q8TF47 636 aa10.58□□□□□ -0.72
CAPNS1-209ENST00000590049 JADE3Q92613 823 aa10.58□□□□□ -0.72
CAPNS1-209ENST00000590049 FAM120BQ96EK7 910 aaKnown RBP10.58□□□□□ -0.72
CAPNS1-209ENST00000590049 MS4A4EQ96PG1 132 aa10.58□□□□□ -0.72
CAPNS1-209ENST00000590049 CDRT15Q96T59 188 aa10.58□□□□□ -0.72
CAPNS1-209ENST00000590049 LPAR4Q99677 370 aa10.58□□□□□ -0.72
CAPNS1-209ENST00000590049 NANOGQ9H9S0 305 aa10.58□□□□□ -0.72
CAPNS1-209ENST00000590049 MAT2BQ9NZL9 334 aa10.58□□□□□ -0.72
CAPNS1-209ENST00000590049 CFL2Q9Y281 166 aa10.58□□□□□ -0.72
CAPNS1-209ENST00000590049 PHF3Q92576 2039 aaKnown RBP10.58□□□□□ -0.72
CAPNS1-209ENST00000590049 A0A1W2PS29 197 aa10.57□□□□□ -0.72
CAPNS1-209ENST00000590049 CFAP73A6NFT4 308 aa10.57□□□□□ -0.72
CAPNS1-209ENST00000590049 GSC2O15499 205 aa10.57□□□□□ -0.72
CAPNS1-209ENST00000590049 PLOD3O60568 738 aa10.57□□□□□ -0.72
CAPNS1-209ENST00000590049 CIB2O75838 187 aa10.57□□□□□ -0.72
CAPNS1-209ENST00000590049 SOX30O94993 753 aa10.57□□□□□ -0.72
CAPNS1-209ENST00000590049 MATN1P21941 496 aa10.57□□□□□ -0.72
CAPNS1-209ENST00000590049 SLC6A2P23975 617 aa10.57□□□□□ -0.72
CAPNS1-209ENST00000590049 CPOXP36551 454 aa10.57□□□□□ -0.72
CAPNS1-209ENST00000590049 KHKP50053 298 aa10.57□□□□□ -0.72
CAPNS1-209ENST00000590049 MTPNP58546 118 aa10.57□□□□□ -0.72
CAPNS1-209ENST00000590049 MRPS35P82673 323 aaKnown RBP10.57□□□□□ -0.72
CAPNS1-209ENST00000590049 DUSP2Q05923 314 aa10.57□□□□□ -0.72
CAPNS1-209ENST00000590049 MAP4K2Q12851 820 aa10.57□□□□□ -0.72
CAPNS1-209ENST00000590049 FADDQ13158 208 aa10.57□□□□□ -0.72
CAPNS1-209ENST00000590049 GAB1Q13480 694 aa10.57□□□□□ -0.72
CAPNS1-209ENST00000590049 CYP51A1Q16850 503 aa10.57□□□□□ -0.72
CAPNS1-209ENST00000590049 SPRED3Q2MJR0 410 aa10.57□□□□□ -0.72
CAPNS1-209ENST00000590049 SPATS1Q496A3 300 aa10.57□□□□□ -0.72
CAPNS1-209ENST00000590049 FAM111BQ6SJ93 734 aa10.57□□□□□ -0.72
CAPNS1-209ENST00000590049 C6orf120Q7Z4R8 191 aa10.57□□□□□ -0.72
CAPNS1-209ENST00000590049 CPEB2Q7Z5Q1 589 aaKnown RBP10.57□□□□□ -0.72
CAPNS1-209ENST00000590049 ANKRD37Q7Z713 158 aa10.57□□□□□ -0.72
CAPNS1-209ENST00000590049 KIF2BQ8N4N8 673 aa10.57□□□□□ -0.72
CAPNS1-209ENST00000590049 MEIOBQ8N635 442 aa10.57□□□□□ -0.72
CAPNS1-209ENST00000590049 OR7G1Q8NGA0 311 aa10.57□□□□□ -0.72
CAPNS1-209ENST00000590049 OR52N2Q8NGI0 321 aa10.57□□□□□ -0.72
CAPNS1-209ENST00000590049 FBXO27Q8NI29 283 aa10.57□□□□□ -0.72
CAPNS1-209ENST00000590049 PNPT1Q8TCS8 783 aaKnown RBP10.57□□□□□ -0.72
CAPNS1-209ENST00000590049 NEURL3Q96EH8 262 aa10.57□□□□□ -0.72
CAPNS1-209ENST00000590049 AURKBQ96GD4 344 aaPredicted RBP10.57□□□□□ -0.72
CAPNS1-209ENST00000590049 CPPED1Q9BRF8 314 aaPredicted RBP10.57□□□□□ -0.72
CAPNS1-209ENST00000590049 OR8D2Q9GZM6 311 aa10.57□□□□□ -0.72
CAPNS1-209ENST00000590049 CXorf21Q9HAI6 301 aa10.57□□□□□ -0.72
CAPNS1-209ENST00000590049 EQTNQ9NQ60 294 aa10.57□□□□□ -0.72
CAPNS1-209ENST00000590049 SIRT3Q9NTG7 399 aaPredicted RBP10.57□□□□□ -0.72
CAPNS1-209ENST00000590049 THUMPD1Q9NXG2 353 aaKnown RBP10.57□□□□□ -0.72
CAPNS1-209ENST00000590049 SLC25A37Q9NYZ2 338 aa10.57□□□□□ -0.72
CAPNS1-209ENST00000590049 PRODH2Q9UF12 536 aa10.57□□□□□ -0.72
CAPNS1-209ENST00000590049 ERVK-19Q9WJR5 959 aa10.57□□□□□ -0.72
CAPNS1-209ENST00000590049 CPAMD8Q8IZJ3 1885 aa10.57□□□□□ -0.72
CAPNS1-209ENST00000590049 NSG1A0A0A6YYJ2 146 aa10.56□□□□□ -0.72
CAPNS1-209ENST00000590049 A0A0G2JNJ9 132 aa10.56□□□□□ -0.72
CAPNS1-209ENST00000590049 DUXAA6NLW8 204 aa10.56□□□□□ -0.72
CAPNS1-209ENST00000590049 TGFBR3LH3BV60 316 aa10.56□□□□□ -0.72
CAPNS1-209ENST00000590049 FXYD1O00168 92 aa10.56□□□□□ -0.72
CAPNS1-209ENST00000590049 UPK1AO00322 258 aa10.56□□□□□ -0.72
CAPNS1-209ENST00000590049 GSTA4O15217 222 aa10.56□□□□□ -0.72
CAPNS1-209ENST00000590049 AGR2O95994 175 aa10.56□□□□□ -0.72
CAPNS1-209ENST00000590049 FPR1P21462 350 aa10.56□□□□□ -0.72
CAPNS1-209ENST00000590049 MAGEA8P43361 318 aa10.56□□□□□ -0.72
CAPNS1-209ENST00000590049 PTH2RP49190 550 aa10.56□□□□□ -0.72
CAPNS1-209ENST00000590049 EEFSECP57772 596 aaKnown RBP10.56□□□□□ -0.72
CAPNS1-209ENST00000590049 EEF1A2Q05639 463 aaKnown RBP10.56□□□□□ -0.72
CAPNS1-209ENST00000590049 ZNF155Q12901 538 aaPredicted RBP10.56□□□□□ -0.72
CAPNS1-209ENST00000590049 LASP1Q14847 261 aaKnown RBP10.56□□□□□ -0.72
CAPNS1-209ENST00000590049 TRMT12Q53H54 448 aaKnown RBP10.56□□□□□ -0.72
CAPNS1-209ENST00000590049 RABL3Q5HYI8 236 aa10.56□□□□□ -0.72
CAPNS1-209ENST00000590049 WIPI1Q5MNZ9 446 aaPredicted RBP10.56□□□□□ -0.72
CAPNS1-209ENST00000590049 ATAD3BQ5T9A4 648 aa10.56□□□□□ -0.72
CAPNS1-209ENST00000590049 HLA-DQA1Q5Y7H0 255 aa10.56□□□□□ -0.72
CAPNS1-209ENST00000590049 SAXO2Q658L1 398 aa10.56□□□□□ -0.72
CAPNS1-209ENST00000590049 ZCCHC12Q6PEW1 402 aa10.56□□□□□ -0.72
CAPNS1-209ENST00000590049 PAPD4Q6PIY7 484 aaKnown RBP10.56□□□□□ -0.72
CAPNS1-209ENST00000590049 RNF111Q6ZNA4 994 aa10.56□□□□□ -0.72
CAPNS1-209ENST00000590049 LANCL3Q6ZV70 420 aa10.56□□□□□ -0.72
CAPNS1-209ENST00000590049 IFNEQ86WN2 208 aa10.56□□□□□ -0.72
CAPNS1-209ENST00000590049 RNF130Q86XS8 419 aa10.56□□□□□ -0.72
CAPNS1-209ENST00000590049 SLC15A3Q8IY34 581 aa10.56□□□□□ -0.72
CAPNS1-209ENST00000590049 CLEC4FQ8N1N0 589 aa10.56□□□□□ -0.72
CAPNS1-209ENST00000590049 OR2L13Q8N349 312 aa10.56□□□□□ -0.72
CAPNS1-209ENST00000590049 LRRC17Q8N6Y2 441 aa10.56□□□□□ -0.72
CAPNS1-209ENST00000590049 C3orf56Q8N813 242 aa10.56□□□□□ -0.72
CAPNS1-209ENST00000590049 TMEM178AQ8NBL3 297 aa10.56□□□□□ -0.72
CAPNS1-209ENST00000590049 MORN4Q8NDC4 146 aa10.56□□□□□ -0.72
CAPNS1-209ENST00000590049 OR7G2Q8NG99 324 aa10.56□□□□□ -0.72
CAPNS1-209ENST00000590049 OR52R1Q8NGF1 315 aa10.56□□□□□ -0.72
CAPNS1-209ENST00000590049 OR10A6Q8NH74 314 aa10.56□□□□□ -0.72
CAPNS1-209ENST00000590049 ADAMTS15Q8TE58 950 aa10.56□□□□□ -0.72
CAPNS1-209ENST00000590049 KCTD14Q9BQ13 255 aaPredicted RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms