RNA–Protein interactions for RNA: ENST00000590034.2

SF3A2-205, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 3

Gene SF3A2, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-205ENST00000590034 PLPPR5Q32ZL2 321 aa12.42□□□□□ -0.42
SF3A2-205ENST00000590034 MFSD12Q6NUT3 480 aa12.42□□□□□ -0.42
SF3A2-205ENST00000590034 TIFABQ6ZNK6 161 aa12.42□□□□□ -0.42
SF3A2-205ENST00000590034 ZNF551Q7Z340 670 aaPredicted RBP12.42□□□□□ -0.42
SF3A2-205ENST00000590034 ZAR1Q86SH2 424 aa12.42□□□□□ -0.42
SF3A2-205ENST00000590034 ATG4DQ86TL0 474 aaPredicted RBP12.42□□□□□ -0.42
SF3A2-205ENST00000590034 GATSQ8NAP1 163 aa12.42□□□□□ -0.42
SF3A2-205ENST00000590034 NOA1Q8NC60 698 aaKnown RBP12.42□□□□□ -0.42
SF3A2-205ENST00000590034 OR4C3Q8NH37 302 aa12.42□□□□□ -0.42
SF3A2-205ENST00000590034 POC1BQ8TC44 478 aa12.42□□□□□ -0.42
SF3A2-205ENST00000590034 AKAP1Q92667 903 aaKnown RBP eCLIP12.42□□□□□ -0.42
SF3A2-205ENST00000590034 EGLN2Q96KS0 407 aa12.42□□□□□ -0.42
SF3A2-205ENST00000590034 TNFRSF12AQ9NP84 129 aa12.42□□□□□ -0.42
SF3A2-205ENST00000590034 MID1IP1Q9NPA3 183 aa12.42□□□□□ -0.42
SF3A2-205ENST00000590034 MRTO4Q9UKD2 239 aaKnown RBP12.42□□□□□ -0.42
SF3A2-205ENST00000590034 LAMP3Q9UQV4 416 aa12.42□□□□□ -0.42
SF3A2-205ENST00000590034 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.41□□□□□ -0.42
SF3A2-205ENST00000590034 A0A087WUV0 522 aaPredicted RBP12.41□□□□□ -0.42
SF3A2-205ENST00000590034 UQCRHLA0A096LP55 91 aa12.41□□□□□ -0.42
SF3A2-205ENST00000590034 A0A0J9YW62 118 aa12.41□□□□□ -0.42
SF3A2-205ENST00000590034 EXOC1LA0A1B0GW35 172 aa12.41□□□□□ -0.42
SF3A2-205ENST00000590034 A0A1W2PRB8 838 aa12.41□□□□□ -0.42
SF3A2-205ENST00000590034 C7orf72A4D263 438 aa12.41□□□□□ -0.42
SF3A2-205ENST00000590034 RNF223E7ERA6 249 aa12.41□□□□□ -0.42
SF3A2-205ENST00000590034 GOLGA8RI6L899 631 aa12.41□□□□□ -0.42
SF3A2-205ENST00000590034 TNFSF11O14788 317 aa12.41□□□□□ -0.42
SF3A2-205ENST00000590034 GCM2O75603 506 aaPredicted RBP12.41□□□□□ -0.42
SF3A2-205ENST00000590034 OXSR1O95747 527 aaPredicted RBP12.41□□□□□ -0.42
SF3A2-205ENST00000590034 SOD3P08294 240 aa12.41□□□□□ -0.42
SF3A2-205ENST00000590034 PSMB1P20618 241 aaKnown RBP12.41□□□□□ -0.42
SF3A2-205ENST00000590034 SHC1P29353 583 aa12.41□□□□□ -0.42
SF3A2-205ENST00000590034 AGTR1P30556 359 aa12.41□□□□□ -0.42
SF3A2-205ENST00000590034 CKAP4Q07065 602 aaKnown RBP12.41□□□□□ -0.42
SF3A2-205ENST00000590034 HSPB3Q12988 150 aa12.41□□□□□ -0.42
SF3A2-205ENST00000590034 TSC22D1Q15714 1073 aa12.41□□□□□ -0.42
SF3A2-205ENST00000590034 ANKRD26P1Q6NSI1 321 aa12.41□□□□□ -0.42
SF3A2-205ENST00000590034 SLC22A9Q8IVM8 553 aa12.41□□□□□ -0.42
SF3A2-205ENST00000590034 WDR75Q8IWA0 830 aaKnown RBP12.41□□□□□ -0.42
SF3A2-205ENST00000590034 OR2V1Q8NHB1 315 aa12.41□□□□□ -0.42
SF3A2-205ENST00000590034 FBXO30Q8TB52 745 aa12.41□□□□□ -0.42
SF3A2-205ENST00000590034 IFT81Q8WYA0 676 aa12.41□□□□□ -0.42
SF3A2-205ENST00000590034 CIDECQ96AQ7 238 aaPredicted RBP12.41□□□□□ -0.42
SF3A2-205ENST00000590034 S100PBPQ96BU1 408 aa12.41□□□□□ -0.42
SF3A2-205ENST00000590034 GIMAP5Q96F15 307 aa12.41□□□□□ -0.42
SF3A2-205ENST00000590034 RNF145Q96MT1 663 aa12.41□□□□□ -0.42
SF3A2-205ENST00000590034 C12orf49Q9H741 205 aa12.41□□□□□ -0.42
SF3A2-205ENST00000590034 MED17Q9NVC6 651 aa12.41□□□□□ -0.42
SF3A2-205ENST00000590034 FBXO34Q9NWN3 711 aa12.41□□□□□ -0.42
SF3A2-205ENST00000590034 MCTS1Q9ULC4 181 aaKnown RBP12.41□□□□□ -0.42
SF3A2-205ENST00000590034 STK38LQ9Y2H1 464 aa12.41□□□□□ -0.42
SF3A2-205ENST00000590034 PLCE1Q9P212 2302 aa12.4□□□□□ -0.42
SF3A2-205ENST00000590034 ALPK2Q86TB3 2170 aa12.4□□□□□ -0.42
SF3A2-205ENST00000590034 A0A087WZY1 265 aa12.4□□□□□ -0.42
SF3A2-205ENST00000590034 OVOL3O00110 214 aa12.4□□□□□ -0.42
SF3A2-205ENST00000590034 NDUFB5O43674 189 aa12.4□□□□□ -0.42
SF3A2-205ENST00000590034 TMCC2O75069 709 aa12.4□□□□□ -0.42
SF3A2-205ENST00000590034 NKX2-2O95096 273 aa12.4□□□□□ -0.42
SF3A2-205ENST00000590034 KCNH1O95259 989 aa12.4□□□□□ -0.42
SF3A2-205ENST00000590034 NTN1O95631 604 aa12.4□□□□□ -0.42
SF3A2-205ENST00000590034 IFI6P09912 130 aa12.4□□□□□ -0.42
SF3A2-205ENST00000590034 DANCRP0C864 163 aa12.4□□□□□ -0.42
SF3A2-205ENST00000590034 ACP2P11117 423 aa12.4□□□□□ -0.42
SF3A2-205ENST00000590034 RPS4XP62701 263 aaKnown RBP12.4□□□□□ -0.42
SF3A2-205ENST00000590034 RAC1P63000 192 aa12.4□□□□□ -0.42
SF3A2-205ENST00000590034 SLC18A2Q05940 514 aa12.4□□□□□ -0.42
SF3A2-205ENST00000590034 VEZF1Q14119 521 aa12.4□□□□□ -0.42
SF3A2-205ENST00000590034 SLC29A2Q14542 456 aa12.4□□□□□ -0.42
SF3A2-205ENST00000590034 CLEC12BQ2HXU8 276 aa12.4□□□□□ -0.42
SF3A2-205ENST00000590034 ZNF385BQ569K4 471 aa12.4□□□□□ -0.42
SF3A2-205ENST00000590034 ALKBH2Q6NS38 261 aa12.4□□□□□ -0.42
SF3A2-205ENST00000590034 NOXRED1Q6NXP6 359 aa12.4□□□□□ -0.42
SF3A2-205ENST00000590034 FIGNL1Q6PIW4 674 aa12.4□□□□□ -0.42
SF3A2-205ENST00000590034 SEZ6L2Q6UXD5 910 aa12.4□□□□□ -0.42
SF3A2-205ENST00000590034 BEND4Q6ZU67 534 aa12.4□□□□□ -0.42
SF3A2-205ENST00000590034 TRIM46Q7Z4K8 759 aa12.4□□□□□ -0.42
SF3A2-205ENST00000590034 GABRG1Q8N1C3 465 aa12.4□□□□□ -0.42
SF3A2-205ENST00000590034 GPR151Q8TDV0 419 aa12.4□□□□□ -0.42
SF3A2-205ENST00000590034 ABHD3Q8WU67 409 aa12.4□□□□□ -0.42
SF3A2-205ENST00000590034 NEUROG1Q92886 237 aa12.4□□□□□ -0.42
SF3A2-205ENST00000590034 SH3YL1Q96HL8 342 aaPredicted RBP12.4□□□□□ -0.42
SF3A2-205ENST00000590034 TSPYL1Q9H0U9 437 aa12.4□□□□□ -0.42
SF3A2-205ENST00000590034 OR10A4Q9H209 315 aa12.4□□□□□ -0.42
SF3A2-205ENST00000590034 GLRX2Q9NS18 164 aa12.4□□□□□ -0.42
SF3A2-205ENST00000590034 EMCNQ9ULC0 261 aa12.4□□□□□ -0.42
SF3A2-205ENST00000590034 GPR52Q9Y2T5 361 aa12.4□□□□□ -0.42
SF3A2-205ENST00000590034 CCL27Q9Y4X3 112 aa12.4□□□□□ -0.42
SF3A2-205ENST00000590034 PTGDR2Q9Y5Y4 395 aa12.4□□□□□ -0.42
SF3A2-205ENST00000590034 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.4□□□□□ -0.42
SF3A2-205ENST00000590034 CCDC151A5D8V7 595 aa12.39□□□□□ -0.43
SF3A2-205ENST00000590034 G3V2L1 256 aa12.39□□□□□ -0.43
SF3A2-205ENST00000590034 RSL1D1O76021 490 aaKnown RBP12.39□□□□□ -0.43
SF3A2-205ENST00000590034 SYNGR4O95473 234 aa12.39□□□□□ -0.43
SF3A2-205ENST00000590034 NGFRP08138 427 aa12.39□□□□□ -0.43
SF3A2-205ENST00000590034 PRPS2P11908 318 aa12.39□□□□□ -0.43
SF3A2-205ENST00000590034 CDKN1AP38936 164 aa12.39□□□□□ -0.43
SF3A2-205ENST00000590034 DMTNQ08495 405 aa12.39□□□□□ -0.43
SF3A2-205ENST00000590034 KIAA0040Q15053 153 aa12.39□□□□□ -0.43
SF3A2-205ENST00000590034 CD226Q15762 336 aa12.39□□□□□ -0.43
SF3A2-205ENST00000590034 ZNF239Q16600 458 aaKnown RBP12.39□□□□□ -0.43
SF3A2-205ENST00000590034 IMPG1Q17R60 797 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 137.2 ms