RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 BDH1Q02338 343 aa2.61□□□□□ -1.99
SMAD4-207ENST00000589076 CD47Q08722 323 aa2.61□□□□□ -1.99
SMAD4-207ENST00000589076 ASAH1Q13510 395 aa2.61□□□□□ -1.99
SMAD4-207ENST00000589076 KCNJ11Q14654 390 aa2.61□□□□□ -1.99
SMAD4-207ENST00000589076 TAF7Q15545 349 aaPredicted RBP2.61□□□□□ -1.99
SMAD4-207ENST00000589076 TPD52L1Q16890 204 aaPredicted RBP2.61□□□□□ -1.99
SMAD4-207ENST00000589076 FAM74A3Q4VXF1 159 aa2.61□□□□□ -1.99
SMAD4-207ENST00000589076 TEX44Q53QW1 395 aa2.61□□□□□ -1.99
SMAD4-207ENST00000589076 MARC1Q5VT66 337 aa2.61□□□□□ -1.99
SMAD4-207ENST00000589076 NCR3LG1Q68D85 454 aa2.61□□□□□ -1.99
SMAD4-207ENST00000589076 ZNF57Q68EA5 555 aaPredicted RBP2.61□□□□□ -1.99
SMAD4-207ENST00000589076 OR8G2PQ6IF36 304 aa2.61□□□□□ -1.99
SMAD4-207ENST00000589076 SULT1C3Q6IMI6 304 aa2.61□□□□□ -1.99
SMAD4-207ENST00000589076 VITQ6UXI7 678 aa2.61□□□□□ -1.99
SMAD4-207ENST00000589076 Q6ZR54 194 aa2.61□□□□□ -1.99
SMAD4-207ENST00000589076 NAXDQ8IW45 347 aa2.61□□□□□ -1.99
SMAD4-207ENST00000589076 C11orf53Q8IXP5 236 aa2.61□□□□□ -1.99
SMAD4-207ENST00000589076 CSNK1A1LQ8N752 337 aa2.61□□□□□ -1.99
SMAD4-207ENST00000589076 MYLPFQ96A32 169 aa2.61□□□□□ -1.99
SMAD4-207ENST00000589076 C18orf25Q96B23 403 aaPredicted RBP2.61□□□□□ -1.99
SMAD4-207ENST00000589076 DTNBP1Q96EV8 351 aa2.61□□□□□ -1.99
SMAD4-207ENST00000589076 DHTKD1Q96HY7 919 aaPredicted RBP2.61□□□□□ -1.99
SMAD4-207ENST00000589076 VPS39Q96JC1 886 aa2.61□□□□□ -1.99
SMAD4-207ENST00000589076 RANBP9Q96S59 729 aa2.61□□□□□ -1.99
SMAD4-207ENST00000589076 TMEM121Q9BTD3 319 aa2.61□□□□□ -1.99
SMAD4-207ENST00000589076 UTP6Q9NYH9 597 aaKnown RBP2.61□□□□□ -1.99
SMAD4-207ENST00000589076 MRPL39Q9NYK5 338 aaKnown RBP2.61□□□□□ -1.99
SMAD4-207ENST00000589076 RSPH14Q9UHP6 348 aa2.61□□□□□ -1.99
SMAD4-207ENST00000589076 ZNF107Q9UII5 783 aaPredicted RBP2.61□□□□□ -1.99
SMAD4-207ENST00000589076 L3MBTL1Q9Y468 752 aa2.61□□□□□ -1.99
SMAD4-207ENST00000589076 SF3B1O75533 1304 aaKnown RBP eCLIP2.61□□□□□ -1.993e-6■■■■■ 137.9
SMAD4-207ENST00000589076 ATP10DQ9P241 1426 aa2.6□□□□□ -1.99
SMAD4-207ENST00000589076 NOL4O94818 638 aa2.6□□□□□ -1.99
SMAD4-207ENST00000589076 DUSP14O95147 198 aaKnown RBP2.6□□□□□ -1.99
SMAD4-207ENST00000589076 IGKV3-15P01624 115 aa2.6□□□□□ -1.99
SMAD4-207ENST00000589076 PDHBP11177 359 aa2.6□□□□□ -1.99
SMAD4-207ENST00000589076 ATP5A1P25705 553 aaKnown RBP2.6□□□□□ -1.99
SMAD4-207ENST00000589076 ADSSP30520 456 aa2.6□□□□□ -1.99
SMAD4-207ENST00000589076 GNPDA1P46926 289 aa2.6□□□□□ -1.99
SMAD4-207ENST00000589076 RND3P61587 244 aa2.6□□□□□ -1.99
SMAD4-207ENST00000589076 CSTF1Q05048 431 aaKnown RBP2.6□□□□□ -1.99
SMAD4-207ENST00000589076 ELP6Q0PNE2 266 aa2.6□□□□□ -1.99
SMAD4-207ENST00000589076 ZNF154Q13106 437 aa2.6□□□□□ -1.99
SMAD4-207ENST00000589076 SERTAD2Q14140 314 aa2.6□□□□□ -1.99
SMAD4-207ENST00000589076 ATXN7L3Q14CW9 347 aaPredicted RBP2.6□□□□□ -1.99
SMAD4-207ENST00000589076 TGIF1Q15583 401 aa2.6□□□□□ -1.99
SMAD4-207ENST00000589076 CCDC57Q2TAC2 916 aa2.6□□□□□ -1.99
SMAD4-207ENST00000589076 SLC36A3Q495N2 470 aa2.6□□□□□ -1.99
SMAD4-207ENST00000589076 CELF3Q5SZQ8 465 aaKnown RBP2.6□□□□□ -1.99
SMAD4-207ENST00000589076 UTF1Q5T230 341 aa2.6□□□□□ -1.99
SMAD4-207ENST00000589076 SLC22A10Q63ZE4 541 aa2.6□□□□□ -1.99
SMAD4-207ENST00000589076 HPS6Q86YV9 775 aa2.6□□□□□ -1.99
SMAD4-207ENST00000589076 GRAMD2AQ8IUY3 354 aa2.6□□□□□ -1.99
SMAD4-207ENST00000589076 ZNF584Q8IVC4 421 aa2.6□□□□□ -1.99
SMAD4-207ENST00000589076 C9orf40Q8IXQ3 194 aa2.6□□□□□ -1.99
SMAD4-207ENST00000589076 GPD1LQ8N335 351 aa2.6□□□□□ -1.99
SMAD4-207ENST00000589076 KLHL30-AS1Q8NEE0 82 aa2.6□□□□□ -1.99
SMAD4-207ENST00000589076 ADAMTS16Q8TE57 1224 aa2.6□□□□□ -1.99
SMAD4-207ENST00000589076 THRSPQ92748 146 aa2.6□□□□□ -1.99
SMAD4-207ENST00000589076 SDSLQ96GA7 329 aa2.6□□□□□ -1.99
SMAD4-207ENST00000589076 SIGLEC12Q96PQ1 595 aa2.6□□□□□ -1.99
SMAD4-207ENST00000589076 DPH7Q9BTV6 452 aa2.6□□□□□ -1.99
SMAD4-207ENST00000589076 TM2D1Q9BX74 207 aa2.6□□□□□ -1.99
SMAD4-207ENST00000589076 GLT8D2Q9H1C3 349 aa2.6□□□□□ -1.99
SMAD4-207ENST00000589076 CALHM2Q9HA72 323 aa2.6□□□□□ -1.99
SMAD4-207ENST00000589076 SAMD4AQ9UPU9 718 aaKnown RBP2.6□□□□□ -1.99
SMAD4-207ENST00000589076 SMC3Q9UQE7 1217 aa2.6□□□□□ -1.99
SMAD4-207ENST00000589076 IGHV3-35A0A0C4DH35 117 aa2.59□□□□□ -1.99
SMAD4-207ENST00000589076 OR6C65A6NJZ3 312 aa2.59□□□□□ -1.99
SMAD4-207ENST00000589076 A8MUI8 341 aa2.59□□□□□ -1.99
SMAD4-207ENST00000589076 E9PLD3 99 aa2.59□□□□□ -1.99
SMAD4-207ENST00000589076 PPIAL4DF5H284 164 aa2.59□□□□□ -1.99
SMAD4-207ENST00000589076 CTAGE5O15320 804 aa2.59□□□□□ -1.99
SMAD4-207ENST00000589076 STX7O15400 261 aaKnown RBP2.59□□□□□ -1.99
SMAD4-207ENST00000589076 NUDT21O43809 227 aaKnown RBP2.59□□□□□ -1.99
SMAD4-207ENST00000589076 TBX19O60806 448 aa2.59□□□□□ -1.99
SMAD4-207ENST00000589076 TSC22D2O75157 780 aa2.59□□□□□ -1.99
SMAD4-207ENST00000589076 B3GAT3O94766 335 aa2.59□□□□□ -1.99
SMAD4-207ENST00000589076 IGF1P05019 195 aa2.59□□□□□ -1.99
SMAD4-207ENST00000589076 SLC35E2P0CK97 266 aa2.59□□□□□ -1.99
SMAD4-207ENST00000589076 EPB41P11171 864 aaKnown RBP2.59□□□□□ -1.99
SMAD4-207ENST00000589076 IGHV1-2P23083 117 aa2.59□□□□□ -1.99
SMAD4-207ENST00000589076 FASP25445 335 aa2.59□□□□□ -1.99
SMAD4-207ENST00000589076 NF2P35240 595 aa2.59□□□□□ -1.99
SMAD4-207ENST00000589076 MAGEA5P43359 124 aa2.59□□□□□ -1.99
SMAD4-207ENST00000589076 ERVPABLB-1P60509 514 aa2.59□□□□□ -1.99
SMAD4-207ENST00000589076 RPL32P62910 135 aaKnown RBP2.59□□□□□ -1.99
SMAD4-207ENST00000589076 CXCL6P80162 114 aa2.59□□□□□ -1.99
SMAD4-207ENST00000589076 RGS1Q08116 209 aa2.59□□□□□ -1.99
SMAD4-207ENST00000589076 GSG1Q2KHT4 349 aa2.59□□□□□ -1.99
SMAD4-207ENST00000589076 GLYR1Q49A26 553 aaPredicted RBP2.59□□□□□ -1.99
SMAD4-207ENST00000589076 NADK2Q4G0N4 442 aa2.59□□□□□ -1.99
SMAD4-207ENST00000589076 PAN3Q58A45 887 aaKnown RBP2.59□□□□□ -1.99
SMAD4-207ENST00000589076 CGB2Q6NT52 195 aa2.59□□□□□ -1.99
SMAD4-207ENST00000589076 SLC25A24Q6NUK1 477 aa2.59□□□□□ -1.99
SMAD4-207ENST00000589076 SERPINA9Q86WD7 417 aa2.59□□□□□ -1.99
SMAD4-207ENST00000589076 MCOLN2Q8IZK6 566 aa2.59□□□□□ -1.99
SMAD4-207ENST00000589076 GMCL1P1Q8NEA9 526 aa2.59□□□□□ -1.99
SMAD4-207ENST00000589076 CCDC26Q8TAB7 109 aa2.59□□□□□ -1.99
SMAD4-207ENST00000589076 CNIH3Q8TBE1 160 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms