RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 PROCP04070 461 aa12.29□□□□□ -0.44
HDAC5-208ENST00000588419 FAM153BP0C7A2 387 aa12.29□□□□□ -0.44
HDAC5-208ENST00000588419 ACP2P11117 423 aa12.29□□□□□ -0.44
HDAC5-208ENST00000588419 PTH2RP49190 550 aa12.29□□□□□ -0.44
HDAC5-208ENST00000588419 RPL38P63173 70 aaKnown RBP12.29□□□□□ -0.44
HDAC5-208ENST00000588419 PRR5P85299 388 aa12.29□□□□□ -0.44
HDAC5-208ENST00000588419 FAM153CQ494X1 144 aa12.29□□□□□ -0.44
HDAC5-208ENST00000588419 VPS26BQ4G0F5 336 aa12.29□□□□□ -0.44
HDAC5-208ENST00000588419 ZNF385BQ569K4 471 aa12.29□□□□□ -0.44
HDAC5-208ENST00000588419 CCNJQ5T5M9 372 aa12.29□□□□□ -0.44
HDAC5-208ENST00000588419 ZNF704Q6ZNC4 412 aaPredicted RBP12.29□□□□□ -0.44
HDAC5-208ENST00000588419 WDR75Q8IWA0 830 aaKnown RBP12.29□□□□□ -0.44
HDAC5-208ENST00000588419 IFT20Q8IY31 132 aa12.29□□□□□ -0.44
HDAC5-208ENST00000588419 OR6K3Q8NGY3 331 aa12.29□□□□□ -0.44
HDAC5-208ENST00000588419 PPCDCQ96CD2 204 aa12.29□□□□□ -0.44
HDAC5-208ENST00000588419 RNF145Q96MT1 663 aa12.29□□□□□ -0.44
HDAC5-208ENST00000588419 LRTM1Q9HBL6 345 aa12.29□□□□□ -0.44
HDAC5-208ENST00000588419 RGS14O43566 566 aa12.28□□□□□ -0.44
HDAC5-208ENST00000588419 PLAUP00749 431 aa12.28□□□□□ -0.44
HDAC5-208ENST00000588419 UROSP10746 265 aa12.28□□□□□ -0.44
HDAC5-208ENST00000588419 NID1P14543 1247 aa12.28□□□□□ -0.44
HDAC5-208ENST00000588419 ZNF17P17021 662 aa12.28□□□□□ -0.44
HDAC5-208ENST00000588419 ME2P23368 584 aa12.28□□□□□ -0.44
HDAC5-208ENST00000588419 SFTPDP35247 375 aa12.28□□□□□ -0.44
HDAC5-208ENST00000588419 MANFP55145 182 aaKnown RBP12.28□□□□□ -0.44
HDAC5-208ENST00000588419 PPP2R2BQ00005 443 aa12.28□□□□□ -0.44
HDAC5-208ENST00000588419 SLC18A2Q05940 514 aa12.28□□□□□ -0.44
HDAC5-208ENST00000588419 GALNTL6Q49A17 601 aa12.28□□□□□ -0.44
HDAC5-208ENST00000588419 GLYR1Q49A26 553 aaPredicted RBP12.28□□□□□ -0.44
HDAC5-208ENST00000588419 BEX5Q5H9J7 111 aa12.28□□□□□ -0.44
HDAC5-208ENST00000588419 PLEKHM3Q6ZWE6 761 aa12.28□□□□□ -0.44
HDAC5-208ENST00000588419 TRIM46Q7Z4K8 759 aa12.28□□□□□ -0.44
HDAC5-208ENST00000588419 ZAR1Q86SH2 424 aa12.28□□□□□ -0.44
HDAC5-208ENST00000588419 COX18Q8N8Q8 333 aa12.28□□□□□ -0.44
HDAC5-208ENST00000588419 CDRT4Q8N9R6 151 aa12.28□□□□□ -0.44
HDAC5-208ENST00000588419 FAM76AQ8TAV0 307 aa12.28□□□□□ -0.44
HDAC5-208ENST00000588419 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.28□□□□□ -0.44
HDAC5-208ENST00000588419 MZB1Q8WU39 189 aa12.28□□□□□ -0.44
HDAC5-208ENST00000588419 TMEM171Q8WVE6 324 aa12.28□□□□□ -0.44
HDAC5-208ENST00000588419 UBLCP1Q8WVY7 318 aaPredicted RBP12.28□□□□□ -0.44
HDAC5-208ENST00000588419 ARSGQ96EG1 525 aa12.28□□□□□ -0.44
HDAC5-208ENST00000588419 PLPPR2Q96GM1 343 aa12.28□□□□□ -0.44
HDAC5-208ENST00000588419 GMPPAQ96IJ6 420 aaPredicted RBP12.28□□□□□ -0.44
HDAC5-208ENST00000588419 MS4A4EQ96PG1 132 aa12.28□□□□□ -0.44
HDAC5-208ENST00000588419 ACTR6Q9GZN1 396 aa12.28□□□□□ -0.44
HDAC5-208ENST00000588419 C1orf109Q9NX04 203 aa12.28□□□□□ -0.44
HDAC5-208ENST00000588419 TAS2R7Q9NYW3 318 aa12.28□□□□□ -0.44
HDAC5-208ENST00000588419 FN1P02751 2386 aaKnown RBP12.28□□□□□ -0.44
HDAC5-208ENST00000588419 ROS1P08922 2347 aa12.27□□□□□ -0.44
HDAC5-208ENST00000588419 CHD3Q12873 2000 aaKnown RBP12.27□□□□□ -0.44
HDAC5-208ENST00000588419 A0A1W2PRB8 838 aa12.27□□□□□ -0.45
HDAC5-208ENST00000588419 TTC36A6NLP5 189 aa12.27□□□□□ -0.45
HDAC5-208ENST00000588419 INAFM1C9JVW0 142 aa12.27□□□□□ -0.45
HDAC5-208ENST00000588419 SLC28A1O00337 649 aa12.27□□□□□ -0.45
HDAC5-208ENST00000588419 SCDO00767 359 aa12.27□□□□□ -0.45
HDAC5-208ENST00000588419 SS18L1O75177 396 aaPredicted RBP12.27□□□□□ -0.45
HDAC5-208ENST00000588419 NKX2-2O95096 273 aa12.27□□□□□ -0.45
HDAC5-208ENST00000588419 NUDT14O95848 222 aa12.27□□□□□ -0.45
HDAC5-208ENST00000588419 THBDP07204 575 aa12.27□□□□□ -0.45
HDAC5-208ENST00000588419 ALOX5P09917 674 aa12.27□□□□□ -0.45
HDAC5-208ENST00000588419 SDC1P18827 310 aa12.27□□□□□ -0.45
HDAC5-208ENST00000588419 LOXP28300 417 aaPredicted RBP12.27□□□□□ -0.45
HDAC5-208ENST00000588419 NR1H2P55055 460 aa12.27□□□□□ -0.45
HDAC5-208ENST00000588419 GUSBP1Q15486 140 aa12.27□□□□□ -0.45
HDAC5-208ENST00000588419 DUSP5Q16690 384 aa12.27□□□□□ -0.45
HDAC5-208ENST00000588419 CTU2Q2VPK5 515 aaKnown RBP12.27□□□□□ -0.45
HDAC5-208ENST00000588419 PLPPR5Q32ZL2 321 aa12.27□□□□□ -0.45
HDAC5-208ENST00000588419 CCDC153Q494R4 210 aa12.27□□□□□ -0.45
HDAC5-208ENST00000588419 HBMQ6B0K9 141 aa12.27□□□□□ -0.45
HDAC5-208ENST00000588419 STK32CQ86UX6 486 aa12.27□□□□□ -0.45
HDAC5-208ENST00000588419 OR2T11Q8NH01 316 aa12.27□□□□□ -0.45
HDAC5-208ENST00000588419 OR4C3Q8NH37 302 aa12.27□□□□□ -0.45
HDAC5-208ENST00000588419 OR2V1Q8NHB1 315 aa12.27□□□□□ -0.45
HDAC5-208ENST00000588419 CEP70Q8NHQ1 597 aa12.27□□□□□ -0.45
HDAC5-208ENST00000588419 PPP1R14CQ8TAE6 165 aa12.27□□□□□ -0.45
HDAC5-208ENST00000588419 ROBO4Q8WZ75 1007 aa12.27□□□□□ -0.45
HDAC5-208ENST00000588419 CAVIN3Q969G5 261 aa12.27□□□□□ -0.45
HDAC5-208ENST00000588419 ZBED6CLQ96FA7 236 aaPredicted RBP12.27□□□□□ -0.45
HDAC5-208ENST00000588419 C16orf58Q96GQ5 468 aa12.27□□□□□ -0.45
HDAC5-208ENST00000588419 MARK4Q96L34 752 aa12.27□□□□□ -0.45
HDAC5-208ENST00000588419 IQCGQ9H095 443 aaKnown RBP12.27□□□□□ -0.45
HDAC5-208ENST00000588419 REEP4Q9H6H4 257 aa12.27□□□□□ -0.45
HDAC5-208ENST00000588419 FANCFQ9NPI8 374 aa12.27□□□□□ -0.45
HDAC5-208ENST00000588419 MED17Q9NVC6 651 aa12.27□□□□□ -0.45
HDAC5-208ENST00000588419 FBXO34Q9NWN3 711 aa12.27□□□□□ -0.45
HDAC5-208ENST00000588419 GIN1Q9NXP7 522 aa12.27□□□□□ -0.45
HDAC5-208ENST00000588419 BAIAP2L1Q9UHR4 511 aa12.27□□□□□ -0.45
HDAC5-208ENST00000588419 USF3Q68DE3 2245 aa12.27□□□□□ -0.45
HDAC5-208ENST00000588419 CR1P17927 2039 aa12.27□□□□□ -0.45
HDAC5-208ENST00000588419 A0A087WZY1 265 aa12.26□□□□□ -0.45
HDAC5-208ENST00000588419 IGLV3-32A0A0A0MS00 114 aa12.26□□□□□ -0.45
HDAC5-208ENST00000588419 NPIPA5A0A0B4J1W7 369 aa12.26□□□□□ -0.45
HDAC5-208ENST00000588419 ALG1L2C9J202 215 aa12.26□□□□□ -0.45
HDAC5-208ENST00000588419 NPIPA7E9PJI5 369 aa12.26□□□□□ -0.45
HDAC5-208ENST00000588419 H3BQF6 201 aa12.26□□□□□ -0.45
HDAC5-208ENST00000588419 COPEO14579 308 aa12.26□□□□□ -0.45
HDAC5-208ENST00000588419 PLIN3O60664 434 aa12.26□□□□□ -0.45
HDAC5-208ENST00000588419 KCNK2O95069 426 aa12.26□□□□□ -0.45
HDAC5-208ENST00000588419 CNOT4O95628 575 aaKnown RBP12.26□□□□□ -0.45
HDAC5-208ENST00000588419 SHBGP04278 402 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms