RNA–Protein interactions for RNA: ENST00000588261.1

HDAC5-207, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-207ENST00000588261 TMCO6Q96DC7 493 aa13.61□□□□□ -0.23
HDAC5-207ENST00000588261 RMND5BQ96G75 393 aaPredicted RBP13.61□□□□□ -0.23
HDAC5-207ENST00000588261 NSL1Q96IY1 281 aa13.61□□□□□ -0.23
HDAC5-207ENST00000588261 COL21A1Q96P44 957 aa13.61□□□□□ -0.23
HDAC5-207ENST00000588261 GPATCH1Q9BRR8 931 aaKnown RBP13.61□□□□□ -0.23
HDAC5-207ENST00000588261 YIPF4Q9BSR8 244 aa13.61□□□□□ -0.23
HDAC5-207ENST00000588261 TMEM38AQ9H6F2 299 aa13.61□□□□□ -0.23
HDAC5-207ENST00000588261 KAT8Q9H7Z6 458 aaKnown RBP13.61□□□□□ -0.23
HDAC5-207ENST00000588261 NANOGQ9H9S0 305 aa13.61□□□□□ -0.23
HDAC5-207ENST00000588261 ARL8BQ9NVJ2 186 aa13.61□□□□□ -0.23
HDAC5-207ENST00000588261 CALML5Q9NZT1 146 aa13.61□□□□□ -0.23
HDAC5-207ENST00000588261 CNIH4Q9P003 139 aa13.61□□□□□ -0.23
HDAC5-207ENST00000588261 P2RX2Q9UBL9 471 aa13.61□□□□□ -0.23
HDAC5-207ENST00000588261 ABCG2Q9UNQ0 655 aa13.61□□□□□ -0.23
HDAC5-207ENST00000588261 HRH3Q9Y5N1 445 aa13.61□□□□□ -0.23
HDAC5-207ENST00000588261 MTORP42345 2549 aa13.61□□□□□ -0.23
HDAC5-207ENST00000588261 AIM2O14862 343 aa13.6□□□□□ -0.23
HDAC5-207ENST00000588261 HS6ST1O60243 411 aa13.6□□□□□ -0.23
HDAC5-207ENST00000588261 NME2P1O60361 137 aa13.6□□□□□ -0.23
HDAC5-207ENST00000588261 TNFRSF21O75509 655 aa13.6□□□□□ -0.23
HDAC5-207ENST00000588261 REM1O75628 298 aa13.6□□□□□ -0.23
HDAC5-207ENST00000588261 SLC25A12O75746 678 aa13.6□□□□□ -0.23
HDAC5-207ENST00000588261 OR12D1P0DN82 309 aa13.6□□□□□ -0.23
HDAC5-207ENST00000588261 CD46P15529 392 aa13.6□□□□□ -0.23
HDAC5-207ENST00000588261 NME2P22392 152 aa13.6□□□□□ -0.23
HDAC5-207ENST00000588261 SLC6A2P23975 617 aa13.6□□□□□ -0.23
HDAC5-207ENST00000588261 CRATP43155 626 aa13.6□□□□□ -0.23
HDAC5-207ENST00000588261 CBX1P83916 185 aa13.6□□□□□ -0.23
HDAC5-207ENST00000588261 HPCAP84074 193 aa13.6□□□□□ -0.23
HDAC5-207ENST00000588261 RBBP4Q09028 425 aa13.6□□□□□ -0.23
HDAC5-207ENST00000588261 COX20Q5RI15 118 aa13.6□□□□□ -0.23
HDAC5-207ENST00000588261 SLC25A25Q6KCM7 469 aa13.6□□□□□ -0.23
HDAC5-207ENST00000588261 C16orf62Q7Z3J2 963 aa13.6□□□□□ -0.23
HDAC5-207ENST00000588261 NET1Q7Z628 596 aaPredicted RBP13.6□□□□□ -0.23
HDAC5-207ENST00000588261 SPPL2CQ8IUH8 684 aa13.6□□□□□ -0.23
HDAC5-207ENST00000588261 FBXW8Q8N3Y1 598 aa13.6□□□□□ -0.23
HDAC5-207ENST00000588261 TMEM178AQ8NBL3 297 aa13.6□□□□□ -0.23
HDAC5-207ENST00000588261 PSD4Q8NDX1 1056 aa13.6□□□□□ -0.23
HDAC5-207ENST00000588261 PNPT1Q8TCS8 783 aaKnown RBP13.6□□□□□ -0.23
HDAC5-207ENST00000588261 SPPL2AQ8TCT8 520 aa13.6□□□□□ -0.23
HDAC5-207ENST00000588261 HGDQ93099 445 aa13.6□□□□□ -0.23
HDAC5-207ENST00000588261 TRNT1Q96Q11 434 aaKnown RBP13.6□□□□□ -0.23
HDAC5-207ENST00000588261 ZNF350Q9GZX5 532 aa13.6□□□□□ -0.23
HDAC5-207ENST00000588261 HOXD1Q9GZZ0 328 aa13.6□□□□□ -0.23
HDAC5-207ENST00000588261 IKZF5Q9H5V7 419 aa13.6□□□□□ -0.23
HDAC5-207ENST00000588261 IL1RL2Q9HB29 575 aa13.6□□□□□ -0.23
HDAC5-207ENST00000588261 A4GALTQ9NPC4 353 aa13.6□□□□□ -0.23
HDAC5-207ENST00000588261 KLF13Q9Y2Y9 288 aaPredicted RBP13.6□□□□□ -0.23
HDAC5-207ENST00000588261 MEMO1Q9Y316 297 aa13.6□□□□□ -0.23
HDAC5-207ENST00000588261 CHCHD2Q9Y6H1 151 aaPredicted RBP13.6□□□□□ -0.23
HDAC5-207ENST00000588261 GXYLT2A0PJZ3 443 aa13.59□□□□□ -0.23
HDAC5-207ENST00000588261 CCT8L1PA6NM43 557 aa13.59□□□□□ -0.23
HDAC5-207ENST00000588261 HNRNPCL1O60812 293 aaKnown RBP13.59□□□□□ -0.23
HDAC5-207ENST00000588261 DNAJA2O60884 412 aa13.59□□□□□ -0.23
HDAC5-207ENST00000588261 UGT2B11O75310 529 aa13.59□□□□□ -0.23
HDAC5-207ENST00000588261 STX11O75558 287 aa13.59□□□□□ -0.23
HDAC5-207ENST00000588261 ETFAP13804 333 aa13.59□□□□□ -0.23
HDAC5-207ENST00000588261 ATP6V1C1P21283 382 aa13.59□□□□□ -0.23
HDAC5-207ENST00000588261 CRISP3P54108 245 aa13.59□□□□□ -0.23
HDAC5-207ENST00000588261 MTPNP58546 118 aa13.59□□□□□ -0.23
HDAC5-207ENST00000588261 ALDH6A1Q02252 535 aaKnown RBP13.59□□□□□ -0.23
HDAC5-207ENST00000588261 FUT5Q11128 374 aa13.59□□□□□ -0.23
HDAC5-207ENST00000588261 CAPRIN1Q14444 709 aaKnown RBP13.59□□□□□ -0.23
HDAC5-207ENST00000588261 KRTAP21-3Q3LHN1 58 aa13.59□□□□□ -0.23
HDAC5-207ENST00000588261 KRTCAP3Q53RY4 240 aa13.59□□□□□ -0.23
HDAC5-207ENST00000588261 GCNT6Q5T4J0 391 aa13.59□□□□□ -0.23
HDAC5-207ENST00000588261 SLC22A10Q63ZE4 541 aa13.59□□□□□ -0.23
HDAC5-207ENST00000588261 C16orf89Q6UX73 402 aa13.59□□□□□ -0.23
HDAC5-207ENST00000588261 IL20RBQ6UXL0 311 aa13.59□□□□□ -0.23
HDAC5-207ENST00000588261 SPNS3Q6ZMD2 512 aa13.59□□□□□ -0.23
HDAC5-207ENST00000588261 C3P1Q6ZMU1 363 aa13.59□□□□□ -0.23
HDAC5-207ENST00000588261 LRRC74BQ6ZQY2 392 aa13.59□□□□□ -0.23
HDAC5-207ENST00000588261 SLC30A8Q8IWU4 369 aa13.59□□□□□ -0.23
HDAC5-207ENST00000588261 PGAM4Q8N0Y7 254 aa13.59□□□□□ -0.23
HDAC5-207ENST00000588261 ACBD4Q8NC06 268 aa13.59□□□□□ -0.23
HDAC5-207ENST00000588261 XAGE5Q8WWM1 108 aa13.59□□□□□ -0.23
HDAC5-207ENST00000588261 DMRTA2Q96SC8 542 aa13.59□□□□□ -0.23
HDAC5-207ENST00000588261 ADOQ96SZ5 270 aa13.59□□□□□ -0.23
HDAC5-207ENST00000588261 SDF2Q99470 211 aa13.59□□□□□ -0.23
HDAC5-207ENST00000588261 THUMPD3Q9BV44 507 aaKnown RBP13.59□□□□□ -0.23
HDAC5-207ENST00000588261 SAP130Q9H0E3 1048 aa13.59□□□□□ -0.23
HDAC5-207ENST00000588261 C1orf21Q9H246 121 aa13.59□□□□□ -0.23
HDAC5-207ENST00000588261 SACM1LQ9NTJ5 587 aa13.59□□□□□ -0.23
HDAC5-207ENST00000588261 ABCD2Q9UBJ2 740 aa13.59□□□□□ -0.23
HDAC5-207ENST00000588261 KIAA0513O60268 411 aa13.58□□□□□ -0.24
HDAC5-207ENST00000588261 CLDN14O95500 239 aa13.58□□□□□ -0.24
HDAC5-207ENST00000588261 C1QCP02747 245 aa13.58□□□□□ -0.24
HDAC5-207ENST00000588261 P04436 131 aa13.58□□□□□ -0.24
HDAC5-207ENST00000588261 TFPTP0C1Z6 253 aa13.58□□□□□ -0.24
HDAC5-207ENST00000588261 ARAFP10398 606 aa13.58□□□□□ -0.24
HDAC5-207ENST00000588261 ENDOUP21128 410 aaKnown RBP13.58□□□□□ -0.24
HDAC5-207ENST00000588261 FBXW4P57775 412 aa13.58□□□□□ -0.24
HDAC5-207ENST00000588261 SPATS1Q496A3 300 aa13.58□□□□□ -0.24
HDAC5-207ENST00000588261 ERICH5Q6P6B1 374 aa13.58□□□□□ -0.24
HDAC5-207ENST00000588261 C6orf89Q6UWU4 347 aa13.58□□□□□ -0.24
HDAC5-207ENST00000588261 DOLPP1Q86YN1 238 aa13.58□□□□□ -0.24
HDAC5-207ENST00000588261 PRR22Q8IZ63 422 aa13.58□□□□□ -0.24
HDAC5-207ENST00000588261 MARVELD2Q8N4S9 558 aa13.58□□□□□ -0.24
HDAC5-207ENST00000588261 ZNF527Q8NB42 609 aa13.58□□□□□ -0.24
HDAC5-207ENST00000588261 FAM13CQ8NE31 585 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms