RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 PITHD1Q9GZP4 211 aaPredicted RBP13.63□□□□□ -0.23
CCDC43-203ENST00000588210 EXOSC4Q9NPD3 245 aaKnown RBP13.63□□□□□ -0.23
CCDC43-203ENST00000588210 LHX9Q9NQ69 397 aa13.63□□□□□ -0.23
CCDC43-203ENST00000588210 CUEDC1Q9NWM3 386 aaPredicted RBP13.63□□□□□ -0.23
CCDC43-203ENST00000588210 SPHK1Q9NYA1 384 aa13.63□□□□□ -0.23
CCDC43-203ENST00000588210 P2RX2Q9UBL9 471 aa13.63□□□□□ -0.23
CCDC43-203ENST00000588210 SEC14L3Q9UDX4 400 aa13.63□□□□□ -0.23
CCDC43-203ENST00000588210 ADAM29Q9UKF5 820 aa13.63□□□□□ -0.23
CCDC43-203ENST00000588210 A4GNTQ9UNA3 340 aa13.63□□□□□ -0.23
CCDC43-203ENST00000588210 IGHV5-51A0A0C4DH38 117 aa13.62□□□□□ -0.23
CCDC43-203ENST00000588210 SLC35F4A4IF30 521 aa13.62□□□□□ -0.23
CCDC43-203ENST00000588210 NDUFS4O43181 175 aa13.62□□□□□ -0.23
CCDC43-203ENST00000588210 SLC28A2O43868 658 aa13.62□□□□□ -0.23
CCDC43-203ENST00000588210 DXOO77932 396 aaKnown RBP13.62□□□□□ -0.23
CCDC43-203ENST00000588210 HBQ1P09105 142 aa13.62□□□□□ -0.23
CCDC43-203ENST00000588210 UGT2B7P16662 529 aa13.62□□□□□ -0.23
CCDC43-203ENST00000588210 CCR8P51685 355 aa13.62□□□□□ -0.23
CCDC43-203ENST00000588210 NDUFA9Q16795 377 aa13.62□□□□□ -0.23
CCDC43-203ENST00000588210 SLC25A30Q5SVS4 291 aa13.62□□□□□ -0.23
CCDC43-203ENST00000588210 WDR53Q7Z5U6 358 aaPredicted RBP13.62□□□□□ -0.23
CCDC43-203ENST00000588210 CELF2-AS1Q8N7Q2 184 aa13.62□□□□□ -0.23
CCDC43-203ENST00000588210 TCEANCQ8N8B7 351 aa13.62□□□□□ -0.23
CCDC43-203ENST00000588210 FLVCR1-AS1Q8TAF5 88 aa13.62□□□□□ -0.23
CCDC43-203ENST00000588210 SLC7A13Q8TCU3 470 aa13.62□□□□□ -0.23
CCDC43-203ENST00000588210 ASB15Q8WXK1 588 aa13.62□□□□□ -0.23
CCDC43-203ENST00000588210 EXOSC8Q96B26 276 aaKnown RBP13.62□□□□□ -0.23
CCDC43-203ENST00000588210 SLC41A2Q96JW4 573 aa13.62□□□□□ -0.23
CCDC43-203ENST00000588210 SLC46A1Q96NT5 459 aa13.62□□□□□ -0.23
CCDC43-203ENST00000588210 TREX2Q9BQ50 279 aaPredicted RBP13.62□□□□□ -0.23
CCDC43-203ENST00000588210 POLDIP3Q9BY77 421 aaKnown RBP13.62□□□□□ -0.23
CCDC43-203ENST00000588210 PCBD2Q9H0N5 130 aa13.62□□□□□ -0.23
CCDC43-203ENST00000588210 ERVK13-1Q9NX77 482 aa13.62□□□□□ -0.23
CCDC43-203ENST00000588210 TBC1D24Q9ULP9 559 aa13.62□□□□□ -0.23
CCDC43-203ENST00000588210 V9GYH0 126 aa13.62□□□□□ -0.23
CCDC43-203ENST00000588210 KIF26BQ2KJY2 2108 aa13.62□□□□□ -0.23
CCDC43-203ENST00000588210 IQCMA0A1B0GVH7 501 aa13.62□□□□□ -0.23
CCDC43-203ENST00000588210 A0A1W2PRQ8 180 aa13.62□□□□□ -0.23
CCDC43-203ENST00000588210 EFCAB7A8K855 629 aa13.62□□□□□ -0.23
CCDC43-203ENST00000588210 B4E171 279 aa13.62□□□□□ -0.23
CCDC43-203ENST00000588210 AGRPO00253 132 aa13.62□□□□□ -0.23
CCDC43-203ENST00000588210 CCL4P13236 92 aa13.62□□□□□ -0.23
CCDC43-203ENST00000588210 RBMS1P29558 406 aaKnown RBP13.62□□□□□ -0.23
CCDC43-203ENST00000588210 PEBP1P30086 187 aaKnown RBP13.62□□□□□ -0.23
CCDC43-203ENST00000588210 TSPAN7P41732 249 aa13.62□□□□□ -0.23
CCDC43-203ENST00000588210 RORCP51449 518 aa13.62□□□□□ -0.23
CCDC43-203ENST00000588210 HSD11B2P80365 405 aa13.62□□□□□ -0.23
CCDC43-203ENST00000588210 COX10Q12887 443 aa13.62□□□□□ -0.23
CCDC43-203ENST00000588210 C1DQ13901 141 aaKnown RBP13.62□□□□□ -0.23
CCDC43-203ENST00000588210 LINC00471Q8N535 108 aa13.62□□□□□ -0.23
CCDC43-203ENST00000588210 FAM26EQ8N5C1 309 aa13.62□□□□□ -0.23
CCDC43-203ENST00000588210 TBC1D19Q8N5T2 526 aa13.62□□□□□ -0.23
CCDC43-203ENST00000588210 OR9Q1Q8NGQ5 310 aa13.62□□□□□ -0.23
CCDC43-203ENST00000588210 TRMT61AQ96FX7 289 aaKnown RBP13.62□□□□□ -0.23
CCDC43-203ENST00000588210 SLC35G5Q96KT7 338 aa13.62□□□□□ -0.23
CCDC43-203ENST00000588210 OCIAD1Q9NX40 245 aa13.62□□□□□ -0.23
CCDC43-203ENST00000588210 C5AR2Q9P296 337 aa13.62□□□□□ -0.23
CCDC43-203ENST00000588210 DKK4Q9UBT3 224 aa13.62□□□□□ -0.23
CCDC43-203ENST00000588210 PISDQ9UG56 409 aa13.62□□□□□ -0.23
CCDC43-203ENST00000588210 DIMT1Q9UNQ2 313 aaKnown RBP13.62□□□□□ -0.23
CCDC43-203ENST00000588210 GRIP1Q9Y3R0 1128 aa13.62□□□□□ -0.23
CCDC43-203ENST00000588210 PRAMEF27A3QJZ7 478 aa13.61□□□□□ -0.23
CCDC43-203ENST00000588210 MYL12BO14950 172 aa13.61□□□□□ -0.23
CCDC43-203ENST00000588210 PRICKLE3O43900 615 aaPredicted RBP13.61□□□□□ -0.23
CCDC43-203ENST00000588210 SSX4O60224 188 aa13.61□□□□□ -0.23
CCDC43-203ENST00000588210 TMPRSS11DO60235 418 aa13.61□□□□□ -0.23
CCDC43-203ENST00000588210 NME6O75414 186 aaPredicted RBP13.61□□□□□ -0.23
CCDC43-203ENST00000588210 TNFSF15O95150 251 aa13.61□□□□□ -0.23
CCDC43-203ENST00000588210 CCT3P49368 545 aaKnown RBP13.61□□□□□ -0.23
CCDC43-203ENST00000588210 ARL4DP49703 201 aa13.61□□□□□ -0.23
CCDC43-203ENST00000588210 TRA2BP62995 288 aaKnown RBP13.61□□□□□ -0.23
CCDC43-203ENST00000588210 PSPHP78330 225 aa13.61□□□□□ -0.23
CCDC43-203ENST00000588210 CCDC92Q53HC0 331 aaPredicted RBP13.61□□□□□ -0.23
CCDC43-203ENST00000588210 UNQ6494/PRO21346Q6UXR6 183 aa13.61□□□□□ -0.23
CCDC43-203ENST00000588210 SPATC1Q76KD6 591 aa13.61□□□□□ -0.23
CCDC43-203ENST00000588210 BMPERQ8N8U9 685 aa13.61□□□□□ -0.23
CCDC43-203ENST00000588210 GPR151Q8TDV0 419 aa13.61□□□□□ -0.23
CCDC43-203ENST00000588210 RGMAQ96B86 450 aa13.61□□□□□ -0.23
CCDC43-203ENST00000588210 WFDC6Q9BQY6 131 aa13.61□□□□□ -0.23
CCDC43-203ENST00000588210 B3GNT4Q9C0J1 378 aa13.61□□□□□ -0.23
CCDC43-203ENST00000588210 POLR2J2Q9GZM3 115 aaKnown RBP13.61□□□□□ -0.23
CCDC43-203ENST00000588210 C14orf119Q9NWQ9 140 aa13.61□□□□□ -0.23
CCDC43-203ENST00000588210 TEX10Q9NXF1 929 aaPredicted RBP13.61□□□□□ -0.23
CCDC43-203ENST00000588210 TAS2R7Q9NYW3 318 aa13.61□□□□□ -0.23
CCDC43-203ENST00000588210 SSR3Q9UNL2 185 aa13.61□□□□□ -0.23
CCDC43-203ENST00000588210 A0A0J9YY10 115 aa13.6□□□□□ -0.23
CCDC43-203ENST00000588210 PMS2P1A4D2B8 440 aa13.6□□□□□ -0.23
CCDC43-203ENST00000588210 SLC9B1P1A6NJY1 282 aa13.6□□□□□ -0.23
CCDC43-203ENST00000588210 BRINP1O60477 761 aa13.6□□□□□ -0.23
CCDC43-203ENST00000588210 RAB36O95755 333 aa13.6□□□□□ -0.23
CCDC43-203ENST00000588210 COPZ1P61923 177 aa13.6□□□□□ -0.23
CCDC43-203ENST00000588210 MC2RQ01718 297 aa13.6□□□□□ -0.23
CCDC43-203ENST00000588210 SYPL1Q16563 259 aa13.6□□□□□ -0.23
CCDC43-203ENST00000588210 TMEM164Q5U3C3 297 aa13.6□□□□□ -0.23
CCDC43-203ENST00000588210 ZNF544Q6NX49 715 aa13.6□□□□□ -0.23
CCDC43-203ENST00000588210 PODNL1Q6PEZ8 512 aa13.6□□□□□ -0.23
CCDC43-203ENST00000588210 TMPRSS11AQ6ZMR5 421 aa13.6□□□□□ -0.23
CCDC43-203ENST00000588210 PHC2Q8IXK0 858 aa13.6□□□□□ -0.23
CCDC43-203ENST00000588210 D2HGDHQ8N465 521 aa13.6□□□□□ -0.23
CCDC43-203ENST00000588210 ZNF578Q96N58 590 aaPredicted RBP13.6□□□□□ -0.23
CCDC43-203ENST00000588210 TAAR9Q96RI9 348 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms