RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 TMEM150CB9EJG8 249 aa10.45□□□□□ -0.74
LIG3-204ENST00000585740 M0R3G1 203 aa10.45□□□□□ -0.74
LIG3-204ENST00000585740 FRS3O43559 492 aa10.45□□□□□ -0.74
LIG3-204ENST00000585740 SDC3O75056 442 aa10.45□□□□□ -0.74
LIG3-204ENST00000585740 CLPXO76031 633 aa10.45□□□□□ -0.74
LIG3-204ENST00000585740 KCNK2O95069 426 aa10.45□□□□□ -0.74
LIG3-204ENST00000585740 MED26O95402 600 aa10.45□□□□□ -0.74
LIG3-204ENST00000585740 HMGN1P05114 100 aa10.45□□□□□ -0.74
LIG3-204ENST00000585740 LCKP06239 509 aa10.45□□□□□ -0.74
LIG3-204ENST00000585740 CTSBP07858 339 aa10.45□□□□□ -0.74
LIG3-204ENST00000585740 MSL3P1P0C860 447 aa10.45□□□□□ -0.74
LIG3-204ENST00000585740 C21orf33P30042 268 aaPredicted RBP10.45□□□□□ -0.74
LIG3-204ENST00000585740 CSTF2P33240 577 aaKnown RBP eCLIP10.45□□□□□ -0.74
LIG3-204ENST00000585740 UGT2B10P36537 528 aa10.45□□□□□ -0.74
LIG3-204ENST00000585740 ARRB1P49407 418 aaPredicted RBP10.45□□□□□ -0.74
LIG3-204ENST00000585740 EMDP50402 254 aa10.45□□□□□ -0.74
LIG3-204ENST00000585740 RHAGQ02094 409 aa10.45□□□□□ -0.74
LIG3-204ENST00000585740 FUT7Q11130 342 aa10.45□□□□□ -0.74
LIG3-204ENST00000585740 SNAPC1Q16533 368 aa10.45□□□□□ -0.74
LIG3-204ENST00000585740 MOGQ16653 247 aa10.45□□□□□ -0.74
LIG3-204ENST00000585740 DGUOKQ16854 277 aa10.45□□□□□ -0.74
LIG3-204ENST00000585740 TIMM50Q3ZCQ8 353 aa10.45□□□□□ -0.74
LIG3-204ENST00000585740 KLHL22Q53GT1 634 aa10.45□□□□□ -0.74
LIG3-204ENST00000585740 MRPL2Q5T653 305 aaKnown RBP10.45□□□□□ -0.74
LIG3-204ENST00000585740 RPL13AP3Q6NVV1 102 aa10.45□□□□□ -0.74
LIG3-204ENST00000585740 ZNF613Q6PF04 617 aa10.45□□□□□ -0.74
LIG3-204ENST00000585740 FIGNL1Q6PIW4 674 aa10.45□□□□□ -0.74
LIG3-204ENST00000585740 ZNF550Q7Z398 422 aa10.45□□□□□ -0.74
LIG3-204ENST00000585740 CMIPQ8IY22 773 aa10.45□□□□□ -0.74
LIG3-204ENST00000585740 TCEANCQ8N8B7 351 aa10.45□□□□□ -0.74
LIG3-204ENST00000585740 SIMC1Q8NDZ2 872 aa10.45□□□□□ -0.74
LIG3-204ENST00000585740 WDR36Q8NI36 951 aaKnown RBP10.45□□□□□ -0.74
LIG3-204ENST00000585740 TBC1D15Q8TC07 691 aa10.45□□□□□ -0.74
LIG3-204ENST00000585740 GAB3Q8WWW8 586 aa10.45□□□□□ -0.74
LIG3-204ENST00000585740 VSTM2LQ96N03 204 aa10.45□□□□□ -0.74
LIG3-204ENST00000585740 IL4I1Q96RQ9 567 aa10.45□□□□□ -0.74
LIG3-204ENST00000585740 DUSP23Q9BVJ7 150 aa10.45□□□□□ -0.74
LIG3-204ENST00000585740 TSSK6Q9BXA6 273 aa10.45□□□□□ -0.74
LIG3-204ENST00000585740 CUTCQ9NTM9 273 aa10.45□□□□□ -0.74
LIG3-204ENST00000585740 UCKL1Q9NWZ5 548 aa10.45□□□□□ -0.74
LIG3-204ENST00000585740 SUSD2Q9UGT4 822 aa10.45□□□□□ -0.74
LIG3-204ENST00000585740 CFL2Q9Y281 166 aa10.45□□□□□ -0.74
LIG3-204ENST00000585740 CDH10Q9Y6N8 788 aa10.45□□□□□ -0.74
LIG3-204ENST00000585740 A0A1B0GVT2 93 aa10.44□□□□□ -0.74
LIG3-204ENST00000585740 KLF4O43474 513 aa10.44□□□□□ -0.74
LIG3-204ENST00000585740 OR2B3O76000 313 aa10.44□□□□□ -0.74
LIG3-204ENST00000585740 ADORA3P0DMS8 318 aa10.44□□□□□ -0.74
LIG3-204ENST00000585740 PNLIPP16233 465 aa10.44□□□□□ -0.74
LIG3-204ENST00000585740 ZNF182P17025 639 aaPredicted RBP10.44□□□□□ -0.74
LIG3-204ENST00000585740 DRD5P21918 477 aa10.44□□□□□ -0.74
LIG3-204ENST00000585740 CD1CP29017 333 aa10.44□□□□□ -0.74
LIG3-204ENST00000585740 TGFBR2P37173 567 aa10.44□□□□□ -0.74
LIG3-204ENST00000585740 OR1D5P58170 312 aa10.44□□□□□ -0.74
LIG3-204ENST00000585740 TUBA1BP68363 451 aa10.44□□□□□ -0.74
LIG3-204ENST00000585740 OCA2Q04671 838 aa10.44□□□□□ -0.74
LIG3-204ENST00000585740 AQP6Q13520 282 aa10.44□□□□□ -0.74
LIG3-204ENST00000585740 ZNF267Q14586 743 aaPredicted RBP10.44□□□□□ -0.74
LIG3-204ENST00000585740 SPCS2Q15005 226 aa10.44□□□□□ -0.74
LIG3-204ENST00000585740 OR1Q1Q15612 314 aa10.44□□□□□ -0.74
LIG3-204ENST00000585740 ZNF141Q15928 474 aa10.44□□□□□ -0.74
LIG3-204ENST00000585740 MAPK14Q16539 360 aa10.44□□□□□ -0.74
LIG3-204ENST00000585740 LYSMD4Q5XG99 296 aa10.44□□□□□ -0.74
LIG3-204ENST00000585740 WDR74Q6RFH5 385 aaPredicted RBP10.44□□□□□ -0.74
LIG3-204ENST00000585740 DGAT2L6Q6ZPD8 337 aa10.44□□□□□ -0.74
LIG3-204ENST00000585740 TUBA1AQ71U36 451 aa10.44□□□□□ -0.74
LIG3-204ENST00000585740 SLC46A3Q7Z3Q1 461 aa10.44□□□□□ -0.74
LIG3-204ENST00000585740 WDR5BQ86VZ2 330 aa10.44□□□□□ -0.74
LIG3-204ENST00000585740 NKAIN4Q8IVV8 208 aa10.44□□□□□ -0.74
LIG3-204ENST00000585740 GPR135Q8IZ08 494 aa10.44□□□□□ -0.74
LIG3-204ENST00000585740 CDK20Q8IZL9 346 aa10.44□□□□□ -0.74
LIG3-204ENST00000585740 SLC43A2Q8N370 569 aa10.44□□□□□ -0.74
LIG3-204ENST00000585740 D2HGDHQ8N465 521 aa10.44□□□□□ -0.74
LIG3-204ENST00000585740 TMEM163Q8TC26 289 aa10.44□□□□□ -0.74
LIG3-204ENST00000585740 BORCS5Q969J3 196 aa10.44□□□□□ -0.74
LIG3-204ENST00000585740 FAM46AQ96IP4 442 aaKnown RBP10.44□□□□□ -0.74
LIG3-204ENST00000585740 ELF4Q99607 663 aaPredicted RBP10.44□□□□□ -0.74
LIG3-204ENST00000585740 RBCK1Q9BYM8 510 aa10.44□□□□□ -0.74
LIG3-204ENST00000585740 TRIM2Q9C040 744 aa10.44□□□□□ -0.74
LIG3-204ENST00000585740 SPRTNQ9H040 489 aaPredicted RBP10.44□□□□□ -0.74
LIG3-204ENST00000585740 AMBNQ9NP70 447 aa10.44□□□□□ -0.74
LIG3-204ENST00000585740 TBC1D23Q9NUY8 699 aa10.44□□□□□ -0.74
LIG3-204ENST00000585740 MRPS18AQ9NVS2 196 aaKnown RBP10.44□□□□□ -0.74
LIG3-204ENST00000585740 DNAJC27Q9NZQ0 273 aa10.44□□□□□ -0.74
LIG3-204ENST00000585740 SLC7A7Q9UM01 511 aa10.44□□□□□ -0.74
LIG3-204ENST00000585740 ERGIC3Q9Y282 383 aa10.44□□□□□ -0.74
LIG3-204ENST00000585740 SPTBP11277 2137 aa10.43□□□□□ -0.74
LIG3-204ENST00000585740 COL5A1P20908 1838 aaPredicted RBP10.43□□□□□ -0.74
LIG3-204ENST00000585740 TNRC6BQ9UPQ9 1833 aaKnown RBP10.43□□□□□ -0.74
LIG3-204ENST00000585740 M0R082 166 aa10.43□□□□□ -0.74
LIG3-204ENST00000585740 M0R129 80 aa10.43□□□□□ -0.74
LIG3-204ENST00000585740 PEX12O00623 359 aa10.43□□□□□ -0.74
LIG3-204ENST00000585740 TOX3O15405 576 aaPredicted RBP10.43□□□□□ -0.74
LIG3-204ENST00000585740 YKT6O15498 198 aa10.43□□□□□ -0.74
LIG3-204ENST00000585740 PRODHO43272 600 aa10.43□□□□□ -0.74
LIG3-204ENST00000585740 TLX2O43763 284 aaPredicted RBP10.43□□□□□ -0.74
LIG3-204ENST00000585740 MAN1A2O60476 641 aa10.43□□□□□ -0.74
LIG3-204ENST00000585740 RAB36O95755 333 aa10.43□□□□□ -0.74
LIG3-204ENST00000585740 IFNA16P05015 189 aa10.43□□□□□ -0.74
LIG3-204ENST00000585740 RPLP0P05388 317 aaKnown RBP10.43□□□□□ -0.74
LIG3-204ENST00000585740 DCNP07585 359 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms