RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 DSCAMO60469 2012 aa10.04□□□□□ -0.8
CCDC47-206ENST00000584112 TMEM114B3SHH9 223 aa10.04□□□□□ -0.8
CCDC47-206ENST00000584112 LSM1O15116 133 aaKnown RBP10.04□□□□□ -0.8
CCDC47-206ENST00000584112 AKAP10O43572 662 aa10.04□□□□□ -0.8
CCDC47-206ENST00000584112 HCRTR2O43614 444 aa10.04□□□□□ -0.8
CCDC47-206ENST00000584112 ZIC3O60481 467 aa10.04□□□□□ -0.8
CCDC47-206ENST00000584112 GOSR1O95249 250 aa10.04□□□□□ -0.8
CCDC47-206ENST00000584112 CRHP06850 196 aa10.04□□□□□ -0.8
CCDC47-206ENST00000584112 FGF4P08620 206 aa10.04□□□□□ -0.8
CCDC47-206ENST00000584112 LINC00032P0C843 101 aa10.04□□□□□ -0.8
CCDC47-206ENST00000584112 MAPK1P28482 360 aa10.04□□□□□ -0.8
CCDC47-206ENST00000584112 GABRA3P34903 492 aa10.04□□□□□ -0.8
CCDC47-206ENST00000584112 SERPINB5P36952 375 aa10.04□□□□□ -0.8
CCDC47-206ENST00000584112 HPCAL1P37235 193 aa10.04□□□□□ -0.8
CCDC47-206ENST00000584112 RPL3P39023 403 aaKnown RBP10.04□□□□□ -0.8
CCDC47-206ENST00000584112 CPA2P48052 419 aa10.04□□□□□ -0.8
CCDC47-206ENST00000584112 RFX3P48380 749 aa10.04□□□□□ -0.8
CCDC47-206ENST00000584112 STARP49675 285 aa10.04□□□□□ -0.8
CCDC47-206ENST00000584112 AGFG1P52594 562 aaKnown RBP10.04□□□□□ -0.8
CCDC47-206ENST00000584112 DIO3P55073 304 aa10.04□□□□□ -0.8
CCDC47-206ENST00000584112 MANFP55145 182 aaKnown RBP10.04□□□□□ -0.8
CCDC47-206ENST00000584112 CAPRIN1Q14444 709 aaKnown RBP10.04□□□□□ -0.8
CCDC47-206ENST00000584112 GALNTL6Q49A17 601 aa10.04□□□□□ -0.8
CCDC47-206ENST00000584112 RAET1LQ5VY80 246 aa10.04□□□□□ -0.8
CCDC47-206ENST00000584112 OR2A2Q6IF42 318 aa10.04□□□□□ -0.8
CCDC47-206ENST00000584112 LRIG3Q6UXM1 1119 aa10.04□□□□□ -0.8
CCDC47-206ENST00000584112 Q6ZSR9 355 aa10.04□□□□□ -0.8
CCDC47-206ENST00000584112 ZNF551Q7Z340 670 aaPredicted RBP10.04□□□□□ -0.8
CCDC47-206ENST00000584112 P4HA3Q7Z4N8 544 aa10.04□□□□□ -0.8
CCDC47-206ENST00000584112 R3HCC1LQ7Z5L2 792 aaKnown RBP10.04□□□□□ -0.8
CCDC47-206ENST00000584112 DDIASQ8IXT1 998 aa10.04□□□□□ -0.8
CCDC47-206ENST00000584112 CDRT4Q8N9R6 151 aa10.04□□□□□ -0.8
CCDC47-206ENST00000584112 NUP43Q8NFH3 380 aa10.04□□□□□ -0.8
CCDC47-206ENST00000584112 OR2M3Q8NG83 312 aa10.04□□□□□ -0.8
CCDC47-206ENST00000584112 OR2T11Q8NH01 316 aa10.04□□□□□ -0.8
CCDC47-206ENST00000584112 OR2W6PQ8NHA6 318 aa10.04□□□□□ -0.8
CCDC47-206ENST00000584112 TWIST2Q8WVJ9 160 aa10.04□□□□□ -0.8
CCDC47-206ENST00000584112 PPP3R2Q96LZ3 170 aa10.04□□□□□ -0.8
CCDC47-206ENST00000584112 TSSK3Q96PN8 268 aa10.04□□□□□ -0.8
CCDC47-206ENST00000584112 FAM111AQ96PZ2 611 aa10.04□□□□□ -0.8
CCDC47-206ENST00000584112 G6PC3Q9BUM1 346 aa10.04□□□□□ -0.8
CCDC47-206ENST00000584112 TBL1XR1Q9BZK7 514 aa10.04□□□□□ -0.8
CCDC47-206ENST00000584112 ROPN1BQ9BZX4 212 aaPredicted RBP10.04□□□□□ -0.8
CCDC47-206ENST00000584112 PIGMQ9H3S5 423 aa10.04□□□□□ -0.8
CCDC47-206ENST00000584112 TUBB1Q9H4B7 451 aa10.04□□□□□ -0.8
CCDC47-206ENST00000584112 ROPN1Q9HAT0 212 aaPredicted RBP10.04□□□□□ -0.8
CCDC47-206ENST00000584112 EQTNQ9NQ60 294 aa10.04□□□□□ -0.8
CCDC47-206ENST00000584112 ACSS1Q9NUB1 689 aaPredicted RBP10.04□□□□□ -0.8
CCDC47-206ENST00000584112 SH3BP4Q9P0V3 963 aa10.04□□□□□ -0.8
CCDC47-206ENST00000584112 LGALS13Q9UHV8 139 aa10.04□□□□□ -0.8
CCDC47-206ENST00000584112 TRAF6Q9Y4K3 522 aa10.04□□□□□ -0.8
CCDC47-206ENST00000584112 DNAJC15Q9Y5T4 150 aa10.04□□□□□ -0.8
CCDC47-206ENST00000584112 EPXP11678 715 aa10.03□□□□□ -0.8
CCDC47-206ENST00000584112 BCKDHAP12694 445 aa10.03□□□□□ -0.8
CCDC47-206ENST00000584112 HK1P19367 917 aa10.03□□□□□ -0.8
CCDC47-206ENST00000584112 TCEA1P23193 301 aaKnown RBP10.03□□□□□ -0.8
CCDC47-206ENST00000584112 ALDH3A1P30838 453 aa10.03□□□□□ -0.8
CCDC47-206ENST00000584112 FRKP42685 505 aaPredicted RBP10.03□□□□□ -0.8
CCDC47-206ENST00000584112 B3GALT5-AS1P59052 145 aa10.03□□□□□ -0.8
CCDC47-206ENST00000584112 PRR5P85299 388 aa10.03□□□□□ -0.8
CCDC47-206ENST00000584112 C17orf67Q0P5P2 114 aa10.03□□□□□ -0.8
CCDC47-206ENST00000584112 FOXF2Q12947 444 aa10.03□□□□□ -0.8
CCDC47-206ENST00000584112 STX5Q13190 355 aa10.03□□□□□ -0.8
CCDC47-206ENST00000584112 TNK1Q13470 666 aa10.03□□□□□ -0.8
CCDC47-206ENST00000584112 PDE7AQ13946 482 aa10.03□□□□□ -0.8
CCDC47-206ENST00000584112 GLYR1Q49A26 553 aaPredicted RBP10.03□□□□□ -0.8
CCDC47-206ENST00000584112 RFTN2Q52LD8 501 aaPredicted RBP10.03□□□□□ -0.8
CCDC47-206ENST00000584112 FREM1Q5H8C1 2179 aa10.03□□□□□ -0.8
CCDC47-206ENST00000584112 ANKRD26P1Q6NSI1 321 aa10.03□□□□□ -0.8
CCDC47-206ENST00000584112 SZRD1Q7Z422 152 aa10.03□□□□□ -0.8
CCDC47-206ENST00000584112 SGMS2Q8NHU3 365 aa10.03□□□□□ -0.8
CCDC47-206ENST00000584112 GPR151Q8TDV0 419 aa10.03□□□□□ -0.8
CCDC47-206ENST00000584112 DUSP19Q8WTR2 217 aa10.03□□□□□ -0.8
CCDC47-206ENST00000584112 HOXB13Q92826 284 aaPredicted RBP10.03□□□□□ -0.8
CCDC47-206ENST00000584112 CIDECQ96AQ7 238 aaPredicted RBP10.03□□□□□ -0.8
CCDC47-206ENST00000584112 INTS12Q96CB8 462 aaKnown RBP10.03□□□□□ -0.8
CCDC47-206ENST00000584112 C1GALT1C1Q96EU7 318 aa10.03□□□□□ -0.8
CCDC47-206ENST00000584112 MS4A4EQ96PG1 132 aa10.03□□□□□ -0.8
CCDC47-206ENST00000584112 PIGQQ9BRB3 760 aa10.03□□□□□ -0.8
CCDC47-206ENST00000584112 RBM24Q9BX46 236 aaKnown RBP10.03□□□□□ -0.8
CCDC47-206ENST00000584112 MED11Q9P086 117 aa10.03□□□□□ -0.8
CCDC47-206ENST00000584112 NTMQ9P121 344 aa10.03□□□□□ -0.8
CCDC47-206ENST00000584112 STOML1Q9UBI4 398 aa10.03□□□□□ -0.8
CCDC47-206ENST00000584112 PACSIN3Q9UKS6 424 aa10.03□□□□□ -0.8
CCDC47-206ENST00000584112 CMYA5Q8N3K9 4069 aa10.02□□□□□ -0.81
CCDC47-206ENST00000584112 IGLV3-32A0A0A0MS00 114 aa10.02□□□□□ -0.81
CCDC47-206ENST00000584112 SLC22A20A6NK97 555 aa10.02□□□□□ -0.81
CCDC47-206ENST00000584112 C17orf51A8MQB3 221 aa10.02□□□□□ -0.81
CCDC47-206ENST00000584112 B4DXG7 233 aa10.02□□□□□ -0.81
CCDC47-206ENST00000584112 PIP5K1BO14986 540 aa10.02□□□□□ -0.81
CCDC47-206ENST00000584112 EMC8O43402 210 aa10.02□□□□□ -0.81
CCDC47-206ENST00000584112 TLX2O43763 284 aaPredicted RBP10.02□□□□□ -0.81
CCDC47-206ENST00000584112 CD5LO43866 347 aa10.02□□□□□ -0.81
CCDC47-206ENST00000584112 NKX2-2O95096 273 aa10.02□□□□□ -0.81
CCDC47-206ENST00000584112 UTS2O95399 124 aa10.02□□□□□ -0.81
CCDC47-206ENST00000584112 HSPA4LO95757 839 aa10.02□□□□□ -0.81
CCDC47-206ENST00000584112 TP53P04637 393 aaPredicted RBP10.02□□□□□ -0.81
CCDC47-206ENST00000584112 CHRNGP07510 517 aa10.02□□□□□ -0.81
CCDC47-206ENST00000584112 LCN1P31025 176 aa10.02□□□□□ -0.81
CCDC47-206ENST00000584112 MAP3K8P41279 467 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms