RNA–Protein interactions for RNA: ENST00000583948.5

NUP85-224, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,197 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-224ENST00000583948 RBM24Q9BX46 236 aaKnown RBP10.44□□□□□ -0.74
NUP85-224ENST00000583948 BHLHE41Q9C0J9 482 aaPredicted RBP10.44□□□□□ -0.74
NUP85-224ENST00000583948 ROGDIQ9GZN7 287 aa10.44□□□□□ -0.74
NUP85-224ENST00000583948 DENND2DQ9H6A0 471 aaPredicted RBP10.44□□□□□ -0.74
NUP85-224ENST00000583948 PRDM7Q9NQW5 492 aa10.44□□□□□ -0.74
NUP85-224ENST00000583948 LYARQ9NX58 379 aaKnown RBP10.44□□□□□ -0.74
NUP85-224ENST00000583948 CMTM6Q9NX76 183 aa10.44□□□□□ -0.74
NUP85-224ENST00000583948 TEX10Q9NXF1 929 aaPredicted RBP10.44□□□□□ -0.74
NUP85-224ENST00000583948 TMEM181Q9P2C4 612 aa10.44□□□□□ -0.74
NUP85-224ENST00000583948 EXO1Q9UQ84 846 aaKnown RBP10.44□□□□□ -0.74
NUP85-224ENST00000583948 YARS2Q9Y2Z4 477 aaKnown RBP10.44□□□□□ -0.74
NUP85-224ENST00000583948 ATG4BQ9Y4P1 393 aa10.44□□□□□ -0.74
NUP85-224ENST00000583948 DEFB108AA8MXU0 73 aa10.43□□□□□ -0.74
NUP85-224ENST00000583948 B3GALT2O43825 422 aa10.43□□□□□ -0.74
NUP85-224ENST00000583948 GUCY1B2O75343 617 aa10.43□□□□□ -0.74
NUP85-224ENST00000583948 ERN1O75460 977 aaKnown RBP10.43□□□□□ -0.74
NUP85-224ENST00000583948 EPPINO95925 133 aa10.43□□□□□ -0.74
NUP85-224ENST00000583948 ABCB1P08183 1280 aaPredicted RBP10.43□□□□□ -0.74
NUP85-224ENST00000583948 DDCP20711 480 aa10.43□□□□□ -0.74
NUP85-224ENST00000583948 ZNF10P21506 573 aaPredicted RBP10.43□□□□□ -0.74
NUP85-224ENST00000583948 SLC6A2P23975 617 aa10.43□□□□□ -0.74
NUP85-224ENST00000583948 MSX2P35548 267 aaPredicted RBP10.43□□□□□ -0.74
NUP85-224ENST00000583948 CDKN2CP42773 168 aa10.43□□□□□ -0.74
NUP85-224ENST00000583948 ERFP50548 548 aa10.43□□□□□ -0.74
NUP85-224ENST00000583948 ARFIP1P53367 373 aa10.43□□□□□ -0.74
NUP85-224ENST00000583948 SELPLGQ14242 412 aa10.43□□□□□ -0.74
NUP85-224ENST00000583948 RABL3Q5HYI8 236 aa10.43□□□□□ -0.74
NUP85-224ENST00000583948 NDUFAF5Q5TEU4 345 aa10.43□□□□□ -0.74
NUP85-224ENST00000583948 NANOGP8Q6NSW7 305 aa10.43□□□□□ -0.74
NUP85-224ENST00000583948 C22orf34Q6ZV56 151 aa10.43□□□□□ -0.74
NUP85-224ENST00000583948 HIPK1Q86Z02 1210 aa10.43□□□□□ -0.74
NUP85-224ENST00000583948 SLC15A3Q8IY34 581 aa10.43□□□□□ -0.74
NUP85-224ENST00000583948 ZCCHC7Q8N3Z6 543 aaKnown RBP10.43□□□□□ -0.74
NUP85-224ENST00000583948 HIPK4Q8NE63 616 aa10.43□□□□□ -0.74
NUP85-224ENST00000583948 VPS37AQ8NEZ2 397 aa10.43□□□□□ -0.74
NUP85-224ENST00000583948 STMN2Q93045 179 aa10.43□□□□□ -0.74
NUP85-224ENST00000583948 PIGTQ969N2 578 aa10.43□□□□□ -0.74
NUP85-224ENST00000583948 EXOSC8Q96B26 276 aaKnown RBP10.43□□□□□ -0.74
NUP85-224ENST00000583948 COQ8BQ96D53 544 aa10.43□□□□□ -0.74
NUP85-224ENST00000583948 JSRP1Q96MG2 331 aaPredicted RBP10.43□□□□□ -0.74
NUP85-224ENST00000583948 OR1F2PQ96R84 312 aa10.43□□□□□ -0.74
NUP85-224ENST00000583948 PANX1Q96RD7 426 aa10.43□□□□□ -0.74
NUP85-224ENST00000583948 SERINC2Q96SA4 455 aa10.43□□□□□ -0.74
NUP85-224ENST00000583948 PIP5K1AQ99755 562 aa10.43□□□□□ -0.74
NUP85-224ENST00000583948 PAIP1Q9H074 479 aaKnown RBP10.43□□□□□ -0.74
NUP85-224ENST00000583948 NANOGQ9H9S0 305 aa10.43□□□□□ -0.74
NUP85-224ENST00000583948 PROK2Q9HC23 129 aa10.43□□□□□ -0.74
NUP85-224ENST00000583948 SH2D2AQ9NP31 389 aa10.43□□□□□ -0.74
NUP85-224ENST00000583948 SERHLQ9NQF3 203 aa10.43□□□□□ -0.74
NUP85-224ENST00000583948 KLHL28Q9NXS3 571 aa10.43□□□□□ -0.74
NUP85-224ENST00000583948 JKAMPQ9P055 326 aa10.43□□□□□ -0.74
NUP85-224ENST00000583948 VAPAQ9P0L0 249 aa10.43□□□□□ -0.74
NUP85-224ENST00000583948 GMPR2Q9P2T1 348 aaKnown RBP10.43□□□□□ -0.74
NUP85-224ENST00000583948 BTNL2Q9UIR0 455 aa10.43□□□□□ -0.74
NUP85-224ENST00000583948 POMPQ9Y244 141 aa10.43□□□□□ -0.74
NUP85-224ENST00000583948 WBP11Q9Y2W2 641 aaKnown RBP10.43□□□□□ -0.74
NUP85-224ENST00000583948 SLC6A5Q9Y345 797 aa10.43□□□□□ -0.74
NUP85-224ENST00000583948 PCDHA9Q9Y5H5 950 aa10.43□□□□□ -0.74
NUP85-224ENST00000583948 CLDN16Q9Y5I7 305 aa10.43□□□□□ -0.74
NUP85-224ENST00000583948 TENM1Q9UKZ4 2725 aa10.43□□□□□ -0.74
NUP85-224ENST00000583948 PRSS51A0A1B0GVH4 220 aa10.42□□□□□ -0.74
NUP85-224ENST00000583948 PRORSD1PA6NEY8 169 aa10.42□□□□□ -0.74
NUP85-224ENST00000583948 LRRC3CA6NJW4 275 aa10.42□□□□□ -0.74
NUP85-224ENST00000583948 GLOD5A6NK44 160 aa10.42□□□□□ -0.74
NUP85-224ENST00000583948 PDPK1O15530 556 aa10.42□□□□□ -0.74
NUP85-224ENST00000583948 ENTPD5O75356 428 aa10.42□□□□□ -0.74
NUP85-224ENST00000583948 PRKRAO75569 313 aaKnown RBP10.42□□□□□ -0.74
NUP85-224ENST00000583948 STAMBPO95630 424 aa10.42□□□□□ -0.74
NUP85-224ENST00000583948 AIFM1O95831 613 aa10.42□□□□□ -0.74
NUP85-224ENST00000583948 C6orf47O95873 294 aa10.42□□□□□ -0.74
NUP85-224ENST00000583948 IFNA2P01563 188 aa10.42□□□□□ -0.74
NUP85-224ENST00000583948 GABRA1P14867 456 aa10.42□□□□□ -0.74
NUP85-224ENST00000583948 ALOX12P18054 663 aa10.42□□□□□ -0.74
NUP85-224ENST00000583948 SOAT1P35610 550 aa10.42□□□□□ -0.74
NUP85-224ENST00000583948 PEX19P40855 299 aa10.42□□□□□ -0.74
NUP85-224ENST00000583948 LIPEQ05469 1076 aa10.42□□□□□ -0.74
NUP85-224ENST00000583948 PRSS53Q2L4Q9 553 aa10.42□□□□□ -0.74
NUP85-224ENST00000583948 HEPHL1Q6MZM0 1159 aa10.42□□□□□ -0.74
NUP85-224ENST00000583948 FAM180BQ6P0A1 224 aa10.42□□□□□ -0.74
NUP85-224ENST00000583948 ZNF621Q6ZSS3 439 aa10.42□□□□□ -0.74
NUP85-224ENST00000583948 IFNEQ86WN2 208 aa10.42□□□□□ -0.74
NUP85-224ENST00000583948 KIF18BQ86Y91 864 aa10.42□□□□□ -0.74
NUP85-224ENST00000583948 MSRB3Q8IXL7 192 aa10.42□□□□□ -0.74
NUP85-224ENST00000583948 FAM47BQ8NA70 645 aa10.42□□□□□ -0.74
NUP85-224ENST00000583948 OR8J3Q8NGG0 315 aa10.42□□□□□ -0.74
NUP85-224ENST00000583948 AURKBQ96GD4 344 aaPredicted RBP10.42□□□□□ -0.74
NUP85-224ENST00000583948 CCDC115Q96NT0 180 aa10.42□□□□□ -0.74
NUP85-224ENST00000583948 ANKRD27Q96NW4 1050 aa10.42□□□□□ -0.74
NUP85-224ENST00000583948 WFIKKN1Q96NZ8 548 aa10.42□□□□□ -0.74
NUP85-224ENST00000583948 MAPKAP1Q9BPZ7 522 aa10.42□□□□□ -0.74
NUP85-224ENST00000583948 KCTD14Q9BQ13 255 aaPredicted RBP10.42□□□□□ -0.74
NUP85-224ENST00000583948 CPPED1Q9BRF8 314 aaPredicted RBP10.42□□□□□ -0.74
NUP85-224ENST00000583948 THUMPD3Q9BV44 507 aaKnown RBP10.42□□□□□ -0.74
NUP85-224ENST00000583948 PIF1Q9H611 641 aa10.42□□□□□ -0.74
NUP85-224ENST00000583948 SLC6A13Q9NSD5 602 aa10.42□□□□□ -0.74
NUP85-224ENST00000583948 SLC25A37Q9NYZ2 338 aa10.42□□□□□ -0.74
NUP85-224ENST00000583948 MYOTQ9UBF9 498 aa10.42□□□□□ -0.74
NUP85-224ENST00000583948 ABCD2Q9UBJ2 740 aa10.42□□□□□ -0.74
NUP85-224ENST00000583948 ZNF629Q9UEG4 869 aaPredicted RBP10.42□□□□□ -0.74
NUP85-224ENST00000583948 PCDHGB4Q9UN71 923 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms